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DepMap

Extracting Biological Insights from the Project Achilles Genome-Scale CRISPR Screens in Cancer Cell Lines | The Cancer Dependency Map Project at Broad Institute | A resource of data and computational tools to expose the vulnerabilities of cancer, and for identifying targets for therapeutic development and designing strategies to optimize patient responses | Explore the Cancer Dependency Map | The goal of the Dependency Map (DepMap) portal is to enable the research community to make discoveries related to cancer vulnerabilities by providing free and timely access to the datasets, visualizations, and analysis tools that are being used by the Cancer Dependency Map Project at the Broad Institute

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Extracting Biological Insights from the Project Achilles Genome-Scale CRISPR Screens in Cancer Cell Lines | The Cancer Dependency Map Project at Broad Institute | A resource of data and computational tools to expose the vulnerabilities of cancer, and for identifying targets for therapeutic development and designing strategies to optimize patient responses | Explore the Cancer Dependency Map | The goal of the Dependency Map (DepMap) portal is to enable the research community to make discoveries related to cancer vulnerabilities by providing free and timely access to the datasets, visualizations, and analysis tools that are being used by the Cancer Dependency Map Project at the Broad Institute

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:32.140470

Webpage:

https://depmap.org

Webpage

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https://depmap.org

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:32.140470

Publications:

Publications
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http://dx.doi.org/10.1101/720243
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:32.140470

http://dx.doi.org/10.1101/720243

Tags:

Tags
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oncology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:32.140470

statistics and probability
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:32.140470

microarray experiment
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:32.140470

oncology statistics and probability microarray experiment

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Project Achilles

Project Achilles is a systematic effort aimed at identifying and cataloging genetic vulnerabilities across hundreds of genomically characterized cancer cell lines. The project uses genome-wide genetic ...

Broad-Novartis Cancer Cell Line Encyclopedia

The Cancer Cell Line Encyclopedia project is a collaboration between the Broad Institute, and the Novartis Institutes for Biomedical Research and its Genomics Institute of the Novartis Research Founda ...

Cancer Genomics Hub

>>>>!!!!<<<< The Cancer Genomics Hub mission is now completed. The Cancer Genomics Hub was established in August 2011 to provide a repository to The Cancer Genome Atlas, the childhood cancer initiati ...

The Cancer Genome Atlas

The Cancer Genome Atlas (TCGA) is a comprehensive, collaborative effort led by the National Institutes of Health (NIH) to map the genomic changes associated with specific types of tumors to improve th ...

The Cancer Immunome Atlas

The Cancer Immunome Database (TCIA) provides results of comprehensive immunogenomic analyses of next generation sequencing data (NGS) data for 20 solid cancers from The Cancer Genome Atlas (TCGA) and ...

PHM and Cancer Outcomes in the WYH Cancer Alliance

The purpose of this data set is to enable the sharing of de-identified patient data, for the Population Health Management and Cancer Outcomes in the West Yorkshire and Harrogate Cancer Alliance (WY&H ...

Network of Cancer Genes

The Network of Cancer Genes (NCG) contains information on duplicability, evolution, protein-protein and microRNA-gene interaction, function, expression and essentiality of cancer genes from manually c ...

CGIdb

Genetic Interaction-Based Biomarkers Identification for Drug Resistance and Sensitivity in Cancer Cells | Cancer cells generally harbor hundreds of alterations in the cancer genomes and act as crucial ...

GENOMICS ENGLAND 100K PHE LINKED DATA

This dataset brings together data from more than 500 local and regional datasets to build a picture of an individual’s treatment from diagnosis. Available for patients diagnosed with Cancer (ICD10 C00 ...

Surveillance Epidemiology and End Results

A premier source for United States cancer statistics, SEER gathers information related to incidence, prevalence, and survival from specific geographic areas that represent 28 percent of the population ...

Children’s Kidney Cancers - Great Ormond Street Hospital

GOSH is the custodian of the latest study dataset - IMPORT. All of the trial/study datasets include: full patient and tumour demographics, associated congenital abnormalities, tumour stage, treatment ...

Atlas of Cancer Signalling Network

ACSN is a web-based multi-scale resource of biological maps depicting molecular processes in cancer cell and tumor microenvironment. The Atlas represents interconnected cancer-related signalling and m ...

Cancer Registration Data

PHE supply cancer registration data to NHS Digital. For linkage with other NHS Digital data to provide notifications on cancer status, be available to support research studies and to identify potentia ...

National Cancer Institute's Genomic Data Commons

The National Cancer Institute’s (NCI’s) Genomic Data Commons (GDC) is a data sharing The National Cancer Institute's Genomic Data Commons (GDC) was created to promote precision medicine in oncology. I ...

German Centre for Cancer Registry Data

The population-based cancer registries in each German federal state transfer data to the German Centre for Cancer Registry Data, as required by the Federal Cancer Registry Data Act. These data are com ...

ccmGDB

Cancer Cell Metabolism Gene Database (ccmGDB) is a comprehensive annotation resource for cell metabolism genes in cancer. The objective of this database is to serve both the cancer cell metabolism and ...

Candidate Cancer Gene Database

The Candidate Cancer Gene Database (CCGD) was developed to disseminate the results of transposon-based forward genetic screens in mice that identify candidate cancer genes. The purpose of the database ...

Cellosaurus

The Cellosaurus is a knowledge resource on cell lines. It attempts to describe all cell lines used in biomedical research. Its scope includes: Immortalized cell lines; naturally immortal cell lines (e ...

Melanoma Molecular Map Project

A collection of molecular interaction maps and pathways involved in cancer development and progression with a focus on melanoma.

UCSC Cancer Genomics Browser

The UCSC Cancer Genomics Browser is a web-based tool to integrate, visualize and analyze cancer genomics and clinical data. The browser displays whole-genome views of experimental measurements for mul ...

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