CDDB
Database for comprehensive results on the conformational dynamics of high molecular weight proteins and protein assemblies. Analysis is performed using a coarse-grained computational approach that is applied to most structures present in the electron microscopy data bank (EMDB). Results include equilibrium thermal fluctuations and elastic strain energy distributions that identify protein domains flexibility, functional-transitions associated domains, and correlations in molecular motions.
Description
More detailed information about this field from each metasource.
Database for comprehensive results on the conformational dynamics of high molecular weight proteins and protein assemblies. Analysis is performed using a coarse-grained computational approach that is applied to most structures present in the electron microscopy data bank (EMDB). Results include equilibrium thermal fluctuations and elastic strain energy distributions that identify protein domains flexibility, functional-transitions associated domains, and correlations in molecular motions.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:02.926258
Webpage:
http://www.cdyn.orgWebpage
More detailed information about this field from each metasource.
Publications:
Publications
More detailed information about this field from each metasource.
Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies
PMID: 21051356
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:02.926258
Publications
More detailed information about this field from each metasource.
Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies
PMID: 21051356
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:02.926258
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Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies
PubMed citations: 4.
4 articles citing: Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies
A critical assessment of finite element modeling approach for protein dynamics. PMID:28573346
In pursuit of an accurate spatial and temporal model of biomolecules at the atomistic level: a perspective on computer simulation. PMID:25615870
3DEM Loupe: Analysis of macromolecular dynamics using structures from electron microscopy. PMID:23671335
The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection. PMID:21177655
Tags:
Tags
More detailed information about this field from each metasource.
molecular dynamics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:02.926258
proteins
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:02.926258
protein folds and structural domains
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:02.926258
imaging
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:02.926258
electron microscopy
metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:02.926258
Tags
More detailed information about this field from each metasource.
molecular dynamics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:02.926258
proteins
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:02.926258
protein folds and structural domains
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:02.926258
imaging
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:02.926258
electron microscopy
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:36:02.926258
molecular dynamics proteins protein folds and structural domains imaging electron microscopy
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