Tag: biological


Found 48 sources
Source Match ReputationScore*

Non-Ribosomal Peptides Database


Norine is a platform that includes a database of nonribosomal peptides together with tools for their analysis. Norine currently contains more than 1000 peptides.
100%

SCRIPDB: A Portal for Easy Access to Syntheses, Chemicals, and Reactions In Patents


SCRIPDB is a chemical structure database designed to make patent metadata accessible. We index public-domain chemical information contained in U.S. patents, and provide the full patent text, reactions, and relationships described within any individua ...
94%

ADPriboDB


ADPriboDB is a database of ADP-ribosylated proteins and their literature-identified ADP-ribosylated residues. The database includes a variety of information for each entry, including any drug treatments performed to obtain the identification of the m ...
89%

BiG-FAM


Biosynthetic gene cluster families
83%

DBAASP


The Database of Antimicrobial Activity and Structure of Peptides (DBAASP) is an open-access, comprehensive database containing information on amino acid sequences, chemical modifications, 3D structures, bioactivities and toxicities of peptides that p ...
81%

Datanator


Datanator is an integrated database of genomic and biochemical data designed to help investigators find data about specific molecules and reactions in specific organisms and specific environments for meta-analyses and mechanistic models. Datanator cu ...
78%

MPS6


Review and classification of published variants in the ARSB gene. The purpose of this database is to support researchers and clinicians. understand structural changes on alylsulfatase B (ASB) caused by Mucopolysaccharidosis type VI (MPS6) mutations ...
78%

CCSbase


CCSbase is an all-in-one web interface for querying the CCS database and accessing the predictive model to support unknown compound identifications.
75%

ESID


The NEW ESID online database network. European Society for Immunodeficiencies. Exchange of ideas and information among doctors, nurses, biomedical investigators, patients and their families concerned with primary immunodeficiency diseases (PID). E ...
73%

NPBS


A chemical data resource with relational data between natural products and biological sources. NPBS Database of Shanghai Institute of Organic Chemistry.
73%

HotSpotAnnotations


Database for hotspot mutations and annotations in cancer. Hotspots, recurrently mutated DNA positions in cancer, are thought to be oncogenic drivers because random chance is unlikely and the knowledge of clear examples of oncogenic hotspots in genes ...
73%

Nabe


Protein-Nucleic Acid Binding Energetic Database
72%

CrustyBase


CrustyBase is an interactive online database for crustacean transcriptomes. CrustyBase provides an environment for navigating and visualising crustacean transcriptome datasets. Users can search existing transcriptomes or import new datasets of their ...
70%

DatumKB: A Database of Biological Experimental Results


DatumKB is a freely accessible database of experimental results involving the function and regulation of human proteins in cultured cells. The results are manually curated from biological research literature using a shorthand language and stored as d ...
68%

CNCDatabase


Cancer drivers at non-coding regions
68%

Open Databases Integration for Materials Design


Designing new materials suitable for specific applications is a long, complex, and costly process. Researchers think of new ideas based on intuition and experience. Their synthesis and evaluation require a tremendous amount of trial and error. In the ...
68%

UniBioDicts


Unified Biological Dictionaries (UniBioDicts) is a set of software packages that unite many of the most important biological controlled vocabularies, database vocabularies, and ontologies, under a common query-interface. These packages can access the ...
64%

LIMONADA


Limonada (Lipid Membrane Open Network And Database) is a database dedicated to the simulation of biological membranes. limonada intends to provide an open library of membranes, along with the description of lipids, topologies and forcefields mandato ...
64%

RARe


RARe is a research infrastructure registered on the french national roadmap that brings together five networks of BRCs conserving genetic, genomic, and biological resources assembled and characterized by research on domestic animals, model or cultiva ...
64%

resistancebank.org


open-access repository for surveys of antimicrobial resistance in animals.
64%

RHIVDB


Database of HIV Amino Acid Sequences and Clinical Data of Infected Patients.
64%

APICURON


APICURON is an open resource that tracks and credits the work of biocurators across multiple participating knowledgebases. Biocuration is essential to extract knowledge from research data and make it available in a structured and standardized way to ...
64%

pKPDB


A Protein Data Bank extension database of pKa and pI theoretical values
64%

PharmDE


A new expert system for drug-excipient compatibility evaluation.
64%

STRipy


A graphical application for enhanced genotyping of pathogenic short tandem repeats in sequencing data
64%

DINAX


DINAX is a comprehensive database of inherited ataxias.
64%

MMHub


Database for the mulberry metabolome. The Mulberry Metabolome Database. Comprehensively, freely, and User-friendly.
64%

CFM


CFM is a database of experimentally validated protocols for chemical compound-based direct reprogramming and transdifferentiation.
64%

SAPdb


SAPdb (Self Assembling Peptides Database) is a database of short peptides and the corresponding nanostructures formed by self-assembly.
64%

LUMINOUS


lumbar multifidus muscle segmentation from ultrasound images. LUMINOUS Database: Lumbar MUltifidus Muscle SegmentatIoN FrOm UltraSound.
64%

SPRD


Surface Plasmon Resonance Database (SPRD) is a surface plasmon resonance database of common factors for better experimental planning.
64%

fIMDb


The Face Image Meta-Database (fIMDb) provides researchers with the tools to find the face imagesbest suited to their research, with filters to locate databases with people of a varied racial and ethnic backgrounds and ages.
64%

PIDE


PIDE (Particle Irradiation Data Ensemble) is a radiobiological database compiling more than 1100 pairs of in-vitro cell survival experiments after photon and ion irradiation.
64%

QSHGM


QSHGM, a database of QS in Human Gut Microbiota includes 28,567 redundancy removal QS synthases and receptors entries of 818 gut microbes.
64%

Plant DataDiscovery


The purpose of this web portal is to facilitate the discoverability of public data on plant biology managed by different laboratories across the world. The web portal indexes and makes findable any kind of plant data. Plant DataDiscovery is an imple ...
64%

WheatIS


This project aims at building an International Wheat Information System (WheatIS) to support the wheat research community. The main objective is to provide a single-access web based system to access to the available data resources and bioinformatics ...
64%

plantannot


The Plant Co-expression Annotation Resource, or plantannot in short, is a system developed to find proteins that have no annotation or function assigned (PUFs, or Proteins of Unknown Function) and could be related to molecular mechanisms regarding ab ...
64%

HuskinDB


Database for skin permeation of xenobiotics. Jupyter Notebook which leads through the code used to create huskinDB publication Figures. huskinDB is a human skin permeation database containing information on experimental protocols used. It provides ...
64%

IND-Enzymes


IND-enzymes is a repository for hydrolytic enzymes derived from thermophilic and psychrophilic bacterial species with potential industrial usage.
64%

metaXplor


metaXplor is an interactive viral and microbial metagenomic data manager. It aims at storing large volumes of user-defined sample, sequence and assignment information while providing a user-friendly fine-filtering web-interface. This online GUI also ...
64%

FADB-China


FADB-China is a molecular-level food adulteration database in China based on molecular fingerprints and similarity algorithms prediction expansion.
64%

NBIGV-DB


A dedicated database of non-B cell derived immunoglobulin variable region. Non-B cell derived ImmunoGlobulin Variable region Database. Welcome to NBIGV, a database dedicated to organizing and characterizing non-B cell derived immunoglobulins.
64%

FAIDARE


FAIDARE: FAIR Data-finder for Agronomic Research. The purpose of this portal is to facilitate the discoverability of public data on plant biology from a federation of established data repositories. It is based on the Breeding API (BrAPI) specificat ...
64%

BIONDA - Biomarker Database


The BIONDA biomarker database provides structured information on all biomarker candidates published in PubMed articles. There is no limitation to any kind of diseases. To this end, PubMed article abstracts and renowned databases such as UniProt and H ...
64%

Plant Cytochrome P450 Database


Plant cytochrome P450 database and web-based tools for structural construction and ligand docking. It is a reliable template-based structure prediction method (PCPCM), and predicted the structures of 180 plant P450s with known functions. In addition, ...
64%

HGFDB


A collective database of helmeted guinea fowl genomics. Helmeted guinea fowl (HGF; Numida meleagris) is vigorous, hardy, and mostly disease-free game birds. The rearing of HGF is a potential alternative poultry system. Because of the characteristics ...
64%

Handle-On-QOL


A dedicated quality of life resource following the diagnosis and treatment of head and neck cancer. A unique online database of papers published on quality of life in head and neck cancer. HANDLE-ON-QOL is a unique online searchable database of all ...
64%

PAI-WSIT


PAI-WSIT (Pathologists Annotated and AI-empowered Whole-Slide Image Database for Tumors) is a comprehensive curated resource for cancerous pathology with deep learning. PAI-WSIT allows you to store your Digital Pathology images into the cloud platfor ...
64%

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