tRNADB-CE

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More detailed information about this field from each metasource. ×

tRNADB-CE

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:17.844163

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trnadb-ce

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:17.844163

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Other names: trnadb-ce

tRNA Gene DataBase Curated by Experts

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Publications:

Publications

More detailed information about this field from each metasource. ×

tRNADB-CE 2011: tRNA gene database curated manually by experts
PMID: 21071414

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:17.844163

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• tRNADB-CE 2011: tRNA gene database curated manually by experts PubMed citations: 41.

  41 articles citing: tRNADB-CE 2011: tRNA gene database curated manually by experts

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  Macrophage Selenoproteins Restrict Intracellular Replication of Francisella tularensis and Are Essential for Host Immunity. PMID:34777335

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  Pol3Base: a resource for decoding the interactome, expression, evolution, epitranscriptome and disease variations of Pol III-transcribed ncRNAs. PMID:34747466

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  Role of a cryptic tRNA gene operon in survival under translational stress. PMID:34379789

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  The complete mitochondrial DNA genome of a cone snail, Conus betulinus (Neogastropoda: Conidae), from the South China sea. PMID:34104742

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  Characterization of the complete mitochondrial genome of Coelastrum_sp.F187. PMID:33490456

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  The complete mitochondrial DNA sequence of the green algae Hariotina sp. F30 (Scenedesmaceae, Sphaeropleales, Chlorophyceae). PMID:33473431

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  Non-Redundant tRNA Reference Sequences for Deep Sequencing Analysis of tRNA Abundance and Epitranscriptomic RNA Modifications. PMID:33435213

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  Mimulus sRNAs Are Wound Responsive and Associated with Transgenerationally Plastic Genes but Rarely Both. PMID:33066159

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  Interplay between Position-Dependent Codon Usage Bias and Hydrogen Bonding at the 5' End of ORFeomes. PMID:32788408

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  Batch-Learning Self-Organizing Map Identifies Horizontal Gene Transfer Candidates and Their Origins in Entire Genomes. PMID:32719664

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  Niche differentiation is spatially and temporally regulated in the rhizosphere. PMID:31953507

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  Divergent Evolution of Eukaryotic CC- and A-Adding Enzymes. PMID:31936900

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  The inflated mitochondrial genomes of siphonous green algae reflect processes driving expansion of noncoding DNA and proliferation of introns. PMID:31915577

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  The complete chloroplast genome sequence of Alpinia oxyphylla Miq. and comparison analysis within the Zingiberaceae family. PMID:31233551

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  tRNAviz: explore and visualize tRNA sequence features. PMID:31127306

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  AtTrm5a catalyses 1-methylguanosine and 1-methylinosine formation on tRNAs and is important for vegetative and reproductive growth in Arabidopsis thaliana. PMID:30508117

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  Sustenance of Escherichia coli on a single tRNAMet. PMID:30256973

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  Mitochondrial genome sequencing of a vermivorous cone snail Conus quercinus supports the correlative analysis between phylogenetic relationships and dietary types of Conus species. PMID:30059499

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  Taxonomic and Functional Compositions Impacted by the Quality of Metatranscriptomic Assemblies. PMID:29973918

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  The complete chloroplast genome of the green algae Hariotina reticulata (Scenedesmaceae, Sphaeropleales, Chlorophyta). PMID:29892956

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  Refining the Ambush Hypothesis: Evidence That GC- and AT-Rich Bacteria Employ Different Frameshift Defence Strategies. PMID:29617761

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  Challenges of site-specific selenocysteine incorporation into proteins by Escherichia coli. PMID:29447106

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  Discovery and Complete Genome Sequence of a Bacteriophage from an Obligate Intracellular Symbiont of a Cellulolytic Protist in the Termite Gut. PMID:28321010

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  An oligotrophic deep-subsurface community dependent on syntrophy is dominated by sulfur-driven autotrophic denitrifiers. PMID:27872277

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  Complete Chloroplast Genome Sequence of Aquilaria sinensis (Lour.) Gilg and Evolution Analysis within the Malvales Order. PMID:27014304

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  A Comprehensive tRNA Genomic Survey Unravels the Evolutionary History of tRNA Arrays in Prokaryotes. PMID:26710853

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  The ancestor of modern Holozoa acquired the CCA-adding enzyme from Alphaproteobacteria by horizontal gene transfer. PMID:26117543

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  Analyses of the complete genome and gene expression of chloroplast of sweet potato [Ipomoea batata]. PMID:25874767

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  Analysis of genetic code ambiguity arising from nematode-specific misacylated tRNAs. PMID:25602944

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  tRNADB-CE: tRNA gene database well-timed in the era of big sequence data. PMID:24822057

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  Circularly permuted tRNA genes: their expression and implications for their physiological relevance and development. PMID:24744771

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  Evidence for the biogenesis of more than 1,000 novel human microRNAs. PMID:24708865

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  tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria. PMID:24586126

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  Evolutionary insights about bacterial GlxRS from whole genome analyses: is GluRS2 a chimera? PMID:24521160

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  Multiple ITS haplotypes in the genome of the lichenized basidiomycete Cora inversa (Hygrophoraceae): fact or artifact? PMID:24343640

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  Structure and function of the T-loop structural motif in noncoding RNAs. PMID:23754657

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  Tertiary structure of bacterial selenocysteine tRNA. PMID:23649835

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  Effects of using coding potential, sequence conservation and mRNA structure conservation for predicting pyrrolysine containing genes. PMID:23557142

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  Decoding system for the AUA codon by tRNAIle with the UAU anticodon in Mycoplasma mobile. PMID:23295668

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  PlantRNA, a database for tRNAs of photosynthetic eukaryotes. PMID:23066098

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  Mapping hidden potential identity elements by computing the average discriminating power of individual tRNA positions. PMID:22378766

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Tags

More detailed information about this field from each metasource. ×

rna sequence databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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data submission, annotation and curation

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:17.844163

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sequence analysis

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:17.844163

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gene and protein families

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:17.844163

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metagenomics

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:17.844163

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rna sequence data submission, annotation and curation sequence analysis gene and protein families metagenomics