tsRBase

Description

More detailed information about this field from each metasource.

tRNA-derived small RNA expression and function

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

PhytoTypeDB

Database of plant protein inter-cultivar variability and function.

tRFexplorer

Identification of tRNA-derived ncRNAs in TCGA and NCI-60 panel cell lines and development of the public database tRFexplorer. tRFexplorer is a public database through which users may display the expr ...

tRFtarget

Targets of tRNA-derived fragments

ASRP - Arabidopsis Small RNA Project

Arabidopsis thaliana small RNA project

PlantRNA

The PlantRNA database compiles tRNA gene sequences retrieved from fully annotated plant nuclear, plastidial and mitochondrial genomes. For each tRNA gene, the linear secondary structure is given as we ...

SEAweb

the small RNA Expression Atlas web application. Sign in with Google or with you SEA account below. If you have not created an account yet, then please register first. If you have received an eMail f ...

DBtRend

A Web-Server of tRNA Expression Profiles from Small RNA Sequencing Data in Humans.

T-psi-C

T-psi-C is a database of tRNA sequences and 3D tRNA structures. The T-psi-C database can be continuously updated by any member of the scientific community.

tRNAdb

Compilation of tRNA sequences and tRNA genes

GtRDB - Genomic tRNA Database

This genomic tRNA database contains tRNA identifications made by the program tRNAscan-SE (Lowe & Eddy, Nucl Acids Res 25: 955-964, 1997) on complete or nearly complete genomes. Unless otherwise noted, ...

tRNADB-CE

tRNA Gene DataBase Curated by Experts

Cereal Small RNA Database

Small RNAs (smRNAs), which include microRNAs (miRNAs), small-interfering RNAS (siRNAs) and trans-acting siRNAs (ta-siRNAs) are ~19-24 nt RNAs that are important negative regulators of nucleotide seque ...

cncRNAdb

Coding and non-coding RNA

The Encyclopedia of Proteome Dynamics

The EPD has been created and is maintained by the Lamond group in the University of Dundee. It combines a polyglot persistent database and web-application that provides open access to integrated prote ...

NRED

Noncoding RNA Expression Database

Extracellular RNA Atlas

The exRNA Atlas is the data and metadata repository of the Extracellular RNA Communication Consortium (ERCC), an NIH Common Fund initiative to learn more about exRNAs in a variety of different context ...

mESAdb

microRNA Expression and Sequence Analysis Database

deepBase

Deep sequencing data from 185 small RNA libraries from diverse tissues and cell lines of seven organisms: human, mouse, chicken, C. intestinalis, D. melanogaster, C. elegans and A. thaliana. It facili ...

mirGFF3

Define a GFF3 format for output of small RNA pipelines. Here, we present a community based, open source project to work toward the standardization of miRNA pipelines and encourage the development of d ...

ASRD

An online database for exploring over 2,000 Arabidopsis small RNA libraries.

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Webpage:

Publications:

Publications
More detailed information about this field from each metasource.

https://doi.org/10.1093/nar/gkaa888
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

More to explore:

1/20

PhytoTypeDB

tRFexplorer

tRFtarget

ASRP - Arabidopsis Small RNA Project

PlantRNA

SEAweb

DBtRend

T-psi-C

tRNAdb

GtRDB - Genomic tRNA Database

tRNADB-CE

Cereal Small RNA Database

cncRNAdb

The Encyclopedia of Proteome Dynamics

NRED

Extracellular RNA Atlas

mESAdb

deepBase

mirGFF3

ASRD

tsRBase

Webpage:

Publications: Publications More detailed information about this field from each metasource. × https://doi.org/10.1093/nar/gkaa888 metasource: Nucleic Acid Research database catalogue version: extracted_at: 2022-11-04T11:16:25.468657 Close

More to explore:

1/20

PhytoTypeDB

tRFexplorer

tRFtarget

ASRP - Arabidopsis Small RNA Project

PlantRNA

SEAweb

DBtRend

T-psi-C

tRNAdb

GtRDB - Genomic tRNA Database

tRNADB-CE

Cereal Small RNA Database

cncRNAdb

The Encyclopedia of Proteome Dynamics

NRED

Extracellular RNA Atlas

mESAdb

deepBase

mirGFF3

ASRD

Publications:

Publications
More detailed information about this field from each metasource.

https://doi.org/10.1093/nar/gkaa888
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657