snOPY

Names
More detailed information about this field from each metasource.

snOPY
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:51.830160

snopy
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:51.830160

Other names: snopy

Small nucleolar RNA orthological gene database.

Webpage:

http://snoopy.med.miyazaki-u.ac.jp/

Publications:

Publications
More detailed information about this field from each metasource.

snOPY: a small nucleolar RNA orthological gene database
PMID: 24148649
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:51.830160

http://dx.doi.org/10.1093/nar/
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

snOPY: a small nucleolar RNA orthological gene database PubMed citations: 41.

41 articles citing: snOPY: a small nucleolar RNA orthological gene database

Phylogenetic and Molecular Analyses Identify SNORD116 Targets Involved in the Prader-Willi Syndrome. PMID:34893870
Biomolecule and Bioentity Interaction Databases in Systems Biology: A Comprehensive Review. PMID:34439912
The Arabidopsis 2'-O-Ribose-Methylation and Pseudouridylation Landscape of rRNA in Comparison to Human and Yeast. PMID:34381476
Identification of Intrinsic RNA Binding Specificity of Purified Proteins by in vitro RNA Immunoprecipitation (vitRIP). PMID:33796620
Profiling of RNA ribose methylation in Arabidopsis thaliana. PMID:33784398
SNORA23 inhibits HCC tumorigenesis by impairing the 2'-O-ribose methylation level of 28S rRNA. PMID:33710804
Mapping rRNA 2'-O-methylations and identification of C/D snoRNAs in Arabidopsis thaliana plants. PMID:33596769
The medium-size noncoding RNA transcriptome of Ostreococcus tauri, the smallest living eukaryote, reveals a large family of small nucleolar RNAs displaying multiple genomic expression strategies. PMID:33575626
The Coding and Small Non-coding Hippocampal Synaptic RNAome. PMID:33569760
Heat shock proteins and small nucleolar RNAs are dysregulated in a Drosophila model for feline hypertrophic cardiomyopathy. PMID:33561224
NOP10 predicts lung cancer prognosis and its associated small nucleolar RNAs drive proliferation and migration. PMID:33288886
Insertions of codons encoding basic amino acids in H7 hemagglutinins of influenza A viruses occur by recombination with RNA at hotspots near snoRNA binding sites. PMID:33188057
The shift from early to late types of ribosomes in zebrafish development involves changes at a subset of rRNA 2'-O-Me sites. PMID:32912962
The Existence and Localization of Nuclear snoRNAs in Arabidopsis thaliana Revisited. PMID:32806552
H/ACA snoRNA levels are regulated during stem cell differentiation. PMID:32710630
A Census and Categorization Method of Epitranscriptomic Marks. PMID:32630140
Two-step mechanism for selective incorporation of lncRNA into a chromatin modifier. PMID:32510132
Small nucleolar RNAs: continuing identification of novel members and increasing diversity of their molecular mechanisms of action. PMID:32267490
Multiomics analysis of tolerant interaction of potato with potato virus Y. PMID:31673114
snoDB: an interactive database of human snoRNA sequences, abundance and interactions. PMID:31598696
A protein-RNA interaction atlas of the ribosome biogenesis factor AATF. PMID:31363146
Nucleomorph Small RNAs in Cryptophyte and Chlorarachniophyte Algae. PMID:30949682
The cellular landscape of mid-size noncoding RNA. PMID:30843375
RNAcentral: a hub of information for non-coding RNA sequences. PMID:30395267
Mediator Is Essential for Small Nuclear and Nucleolar RNA Transcription in Yeast. PMID:30275344
Targeting RNA in mammalian systems with small molecules. PMID:29726113
Nuclear fate of yeast snoRNA is determined by co-transcriptional Rnt1 cleavage. PMID:29725044
The exon-intron gene structure upstream of the initiation codon predicts translation efficiency. PMID:29684192
Clinical significance and biological roles of small nucleolar RNAs in hepatocellular carcinoma. PMID:29541452
Salicylic Acid Perturbs sRNA-Gibberellin Regulatory Network in Immune Response of Potato to Potato virus Y Infection. PMID:29312421
The yeast noncoding RNA interaction network. PMID:28701522
Control of box C/D snoRNP assembly by N6-methylation of adenine. PMID:28623187
The circadian dynamics of small nucleolar RNA in the mouse liver. PMID:28468917
A comprehensive benchmark of RNA-RNA interaction prediction tools for all domains of life. PMID:27993777
Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function. PMID:27911188
Transcriptional regulation of snRNAs and its significance for plant development. PMID:27900551
Phylogenetic distribution of plant snoRNA families. PMID:27881081
RNAcentral: a comprehensive database of non-coding RNA sequences. PMID:27794554
The European Bioinformatics Institute in 2016: Data growth and integration. PMID:26673705
snoRNAs are a novel class of biologically relevant Myc targets. PMID:25888729
SNORD76, a box C/D snoRNA, acts as a tumor suppressor in glioblastoma. PMID:25715874
http://dx.doi.org/10.1093/nar/

Tags:

Tags
More detailed information about this field from each metasource.

rna sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

genetics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:51.830160

functional, regulatory and non-coding rna
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:51.830160

small molecules
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:51.830160

rna sequence genetics functional, regulatory and non-coding rna small molecule

More to explore:

1/20

Previous Next

Need help integrating and/or managing biomedical data?

Webpage:

More to explore:

1/20

RPG - Ribosomal Protein Gene database

Ribocentre

D-lnc

OsteoporosAtlas

RNAcentral

FuncPEP

cncRNAdb

miRDB

Rfam

RepTar

T1TAdb

RMBase

lncRNAdb

TransLnc

REIA

PltRNAdb

NONCODE

LncRNAWiki 2.0

ASRD

LncVar