tRFdb

tRFtarget

Targets of tRNA-derived fragments

GtRDB - Genomic tRNA Database

This genomic tRNA database contains tRNA identifications made by the program tRNAscan-SE (Lowe & Eddy, Nucl Acids Res 25: 955-964, 1997) on complete or nearly complete genomes. Unless otherwise noted, ...

RNA FRABASE

A database of 3D RNA fragments within known RNA structures

PlantRNA

The PlantRNA database compiles tRNA gene sequences retrieved from fully annotated plant nuclear, plastidial and mitochondrial genomes. For each tRNA gene, the linear secondary structure is given as we ...

tRNADB-CE

tRNA Gene DataBase Curated by Experts

T-psi-C

T-psi-C is a database of tRNA sequences and 3D tRNA structures. The T-psi-C database can be continuously updated by any member of the scientific community.

RAID

Human RNA-RNA and RNA-protein interactions

RNA Modification Database

Naturally modified nucleosides in RNA

DARNED

Database of RNA Editing

miRGator

microRNA target prediction, functional analysis, and gene expression data

BPS

Database of RNA Base-Pair Structures

PolyA_DB

sRNAMap

small regulatory RNA in microbial genomes

FragmentStore

Comprehensive database of fragments linking metabolites, toxic molecules and drugs

VTechData

Virginia Tech’s Data Repository TechData is a platform for openly publishing datasets or other research products created by Virginia Tech faculty, staff, and students. VTechData highlights, preserves, ...

RADAR

A Rigorously Annotated Database of A-to-I RNA editing

RPFdb

Ribosome profiling database

MeT-DB

RNA MEthylation by SEquencing databaSe

LNCediting

RNA editing sites in lncRNAs from human, monkey, mouse and fly