mycoCLAP
mycoCLAP is a searchable resource for the knowledge and annotation of Characterized Lignocellulose-Active Proteins of fungal origin.
Description
More detailed information about this field from each metasource.
mycoCLAP is a searchable resource for the knowledge and annotation of Characterized Lignocellulose-Active Proteins of fungal origin.
metasource: Fairsharing.orgversion: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Webpage:
http://mycoCLAP.fungalgenomics.caWebpage
More detailed information about this field from each metasource.
http://mycoCLAP.fungalgenomics.ca
metasource: Fairsharing.orgversion: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Curation of characterized glycoside hydrolases of fungal origin
PMID: 21622642
metasource: Fairsharing.org
version: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications
More detailed information about this field from each metasource.
Curation of characterized glycoside hydrolases of fungal origin
PMID: 21622642
metasource: Fairsharing.org
version: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
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Curation of characterized glycoside hydrolases of fungal origin
PubMed citations: 43.
43 articles citing: Curation of characterized glycoside hydrolases of fungal origin
Secretome Analysis of Macrophomina phaseolina Identifies an Array of Putative Virulence Factors Responsible for Charcoal Rot Disease in Plants. PMID:35479629
Transcriptional Profiles of a Foliar Fungal Endophyte (Pestalotiopsis, Ascomycota) and Its Bacterial Symbiont (Luteibacter, Gammaproteobacteria) Reveal Sulfur Exchange and Growth Regulation during Early Phases of Symbiotic Interaction. PMID:35293790
Polyketide Derivatives in the Resistance of Gerbera hybrida to Powdery Mildew. PMID:35069647
A survey of substrate specificity among Auxiliary Activity Family 5 copper radical oxidases. PMID:34738149
Genomic Studies of White-Rot Fungus Cerrena unicolor SP02 Provide Insights into Food Safety Value-Added Utilization of Non-Food Lignocellulosic Biomass. PMID:34682256
The Role of Glycoside Hydrolases in Phytopathogenic Fungi and Oomycetes Virulence. PMID:34502268
Harnessing microbial wealth for lignocellulose biomass valorization through secretomics: a review. PMID:34225772
Defeated by the nines: nine extracellular strategies to avoid microbe-associated molecular patterns recognition in plants. PMID:33871653
The Nutritional Significance of Intestinal Fungi: Alteration of Dietary Carbohydrate Composition Triggers Colonic Fungal Community Shifts in a Pig Model. PMID:33712429
Molecular Dialogues between Early Divergent Fungi and Bacteria in an Antagonism versus a Mutualism. PMID:32900811
Comparative Genomics Uncovers the Genetic Diversity and Synthetic Biology of Secondary Metabolite Production of Trametes. PMID:32363038
In silico Proteomic Analysis Provides Insights Into Phylogenomics and Plant Biomass Deconstruction Potentials of the Tremelalles. PMID:32318549
Network analysis exposes core functions in major lifestyles of fungal and oomycete plant pathogens. PMID:31878885
Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis. PMID:31830917
iTRAQ-based proteomic analysis reveals the mechanisms of Botrytis cinerea controlled with Wuyiencin. PMID:31829181
Redesigning N-glycosylation sites in a GH3 β-xylosidase improves the enzymatic efficiency. PMID:31754374
Lignin degradation potential and draft genome sequence of Trametes trogii S0301. PMID:31687044
The Genome of the Fungal Pathogen Verticillium dahliae Reveals Extensive Bacterial to Fungal Gene Transfer. PMID:30799497
Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi. PMID:30588510
Genomic and exoproteomic diversity in plant biomass degradation approaches among Aspergilli. PMID:30487660
Scaling up data curation using deep learning: An application to literature triage in genomic variation resources. PMID:30102703
Application of Transcriptomics to Compare the Carbohydrate Active Enzymes That Are Expressed by Diverse Genera of Anaerobic Fungi to Degrade Plant Cell Wall Carbohydrates. PMID:30061875
De novo assembly and comparative transcriptome analysis of Monilinia fructicola, Monilinia laxa and Monilinia fructigena, the causal agents of brown rot on stone fruits. PMID:29866047
Ultra-low input transcriptomics reveal the spore functional content and phylogenetic affiliations of poorly studied arbuscular mycorrhizal fungi. PMID:29211832
In vitro investigations on extracellular proteins secreted by Aphanomyces invadans, the causative agent of epizootic ulcerative syndrome. PMID:29121973
Carbohydrate-active enzymes in Trichoderma harzianum: a bioinformatic analysis bioprospecting for key enzymes for the biofuels industry. PMID:29025413
Comparative transcriptome analysis and identification of candidate effectors in two related rust species (Gymnosporangium yamadae and Gymnosporangium asiaticum). PMID:28830353
Protein Bioinformatics Databases and Resources. PMID:28150231
Temperature Modulates the Secretome of the Phytopathogenic Fungus Lasiodiplodia theobromae. PMID:27536303
Phylogenetic analysis of β-xylanase SRXL1 of Sporisorium reilianum and its relationship with families (GH10 and GH11) of Ascomycetes and Basidiomycetes. PMID:27040368
Transcriptome analysis of the white pine blister rust pathogen Cronartium ribicola: de novo assembly, expression profiling, and identification of candidate effectors. PMID:26338692
Closely related fungi employ diverse enzymatic strategies to degrade plant biomass. PMID:26236396
mycoCLAP, the database for characterized lignocellulose-active proteins of fungal origin: resource and text mining curation support. PMID:25754864
IMA Genome-F 3: Draft genomes of Amanita jacksonii, Ceratocystis albifundus, Fusarium circinatum, Huntiella omanensis, Leptographium procerum, Rutstroemia sydowiana, and Sclerotinia echinophila. PMID:25734036
The importance of fungi and mycology for addressing major global challenges*. PMID:25734035
Genome sequence, comparative analysis, and evolutionary insights into chitinases of entomopathogenic fungus Hirsutella thompsonii. PMID:25716828
Machine learning for biomedical literature triage. PMID:25551575
Genomics review of holocellulose deconstruction by aspergilli. PMID:25428936
The characterization of the endoglucanase Cel12A from Gloeophyllum trabeum reveals an enzyme highly active on β-glucan. PMID:25251390
Correction: Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi. PMID:24422981
The production and characterization of a new active lipase from Acremonium alcalophilum using a plant bioreactor. PMID:23915965
Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi. PMID:23617724
Semantic text mining support for lignocellulose research. PMID:22595090
Tags:
Tags
More detailed information about this field from each metasource.
enzyme
metasource: Fairsharing.org
version: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Tags
More detailed information about this field from each metasource.
enzyme
metasource: Fairsharing.orgversion: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: mycoCLAP; mycoCLAP; DOI: https://doi.org/10.25504/FAIRsharing.ezp87; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
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