eSLDB - eukaryotic Subcellular Localization database

LocDB

Experimental annotations of localization for Homo sapiens and Arabidopsis thaliana

RNALocate

RNA Localization in the cell

ValidNESs

Secreted Protein Database

Secreted proteins from human, mouse and rat

DeepMitoDB

DeepMitoDB is a database of experimental and predicted subcellular localization of mitochondrial proteins with exteded functional annotation.

SUBA

The Arabidopsis Subcellular Database (SUBA, http://suba.plantenergy.uwa.edu.au) is maintained by the ARC Centre of Excellence in Plant Energy Biology at The University of Western Australia. The databa ...

Membranome

A database of single-pass membrane proteins

Compartmentalized Protein-Protein Interaction

The compartmentalized protein-protein interaction database (ComPPI), provides qualitative information on the interactions, proteins and their localizations integrated from multiple databases for prote ...

Yeast GFP fusion localization database (yeastgfp)

Yeast GFP fusion localization database.

Manually Curated Database of Rice Proteins

The Manually Curated Database of Rice Proteins (MCDRP) is a manually-curated database based on published experimental data. The database contains data for rice proteins curated from experiments drawn ...

PA-GOSUB

Protein sequences from model organisms, GO assignment and subcellular localization

ENA Sequence Flat File Format

ENA Sequence Flat File Format is a standardised plain text format for nucleotide sequences. This format was previously called the EMBL Sequence Flat File Format.

NPD - Nuclear Protein Database

The NPD is a curated database that contains information on more than 1200 vertebrate proteins that are thought, or are known, to localise to the cell nucleus. Each entry is annotated with information ...

Human Protein Atlas

The Human Protein Atlas is program started with the aim to map of all the human proteins in cells, tissues and organs using integration of various omics technologies. It consists of three parts: Tissu ...

PSORTdb

Protein subcellular localization (SCL) is important for understanding protein function, genome annotation, and aids identification of potential cell surface diagnostic markers, drug targets, or vaccin ...

DroID - Drosophila Interactions Database

DroID, the Drosophila Interactions Database, assembles gene and protein interaction data from a variety of sources into one easily accessible, comprehensive database. The database includes published a ...

NMPdb - Nuclear matrix associated proteins database

Nuclear matrix associated proteins database

ARAMEMNON

ARAMEMNON is a curated database for Arabidopsis thaliana transmembrane (TM) proteins and transporters. The database compiles topology and signal sequence predictions and displays the results in a dire ...

Protein Classification Benchmark Collection

The Protein Classification Benchmark Collection was created in order to create standard datasets on which the performance of machine learning methods can be compared.