Other names: dntppooldb
A manually curated database of experimentally determined dNTP pools and pool changes in biological samples.
endocrinology and metabolism genetic engineering transcription factors and regulatory sites physiology oncology
Enhancers are a class of cis-regulatory elements that can increase gene transcription by forming loops in intergenic regions, introns and exons. Enhancers, as well as their associated target genes, an ...
HORDB a comprehensive database of peptide hormones.
Database of zinc binding sites.
ERMer: A serverless platform for navigating, analyzing, and visualizing Escherichiacoli regulatory landscape through graph database.
A comprehensive database for regulations of human transcription factors and their targets. Transcription factors (TFs) as key regulators could modulate the expression of target genes by binding to sp ...
A comprehensive manually curated database for transcription factors and related markers in specific cell and tissue types in human.
Database of genetic variations associated with long noncoding genes.
A disorders of sex development atlas for reproductive endocrinology-related gene discovery in integrative omics platforms.
PAZAR is a software framework for the construction and maintenance of regulatory sequence data annotations; a framework which allows multiple boutique databases to function independently within a larg ...
m6ADD is a database containing manually collected experimentally confirmed m6A (N6-methyladenosine)-disease data and data obtained from high-throughput disease m6A modification profiles, aimed at expl ...
a manually curated database of viral integration sites in the human genome. VISDB, visdb, virus integration site, viral integration, DNA virus, retrovirus, HBV, HPV, HIV, HTLV-1, EBV, AAV2, MCV, MLV, ...
TFcancer is a manually curated database of transcription factors associated with human cancer. TFcancer features in comprehensive annotations of TFs in human cancers. TFcancer mainly focused on the in ...
Database for Human Transcription Co-Factors
Predicted regulons in prokaryotic genomes
ScerTF is a database of position weight matrices (PWMs) for transcription factors in Saccharomyces species. It identifies a single matrix for each TF that best predicts in vivo data, providing metrics ...
FlyTF (v2) is a manually curated catalogue of Drosophila site-specific transcription factors (TFs). It integrates proteins identified as DNA-binding TFs by computational prediction based on structural ...
Annotated reference dataset for transcriptional start sites (TSS) in human and mouse.
Database to discover the regulate relationships in the context of enhancers.
Curated compendium of specific DNA-binding RNA polymerase II transcription factors.
The Arabidopsis Gene Regulatory Information Server (AGRIS) is a new information resource of Arabidopsis promoter sequences, transcription factors and their target genes. AGRIS currently contains two d ...