Packing of RNA molecules and complexes
structure nucleic acid structure
Membrane Proteins: Packing Densities, packing defects and internal water molecules
Small molecule inhibitors of RNA
Base interactions in RNA structures
RNA structural modules and their interactions
A database of 3D RNA fragments within known RNA structures
The Nucleic Acids Database contains information about experimentally-determined nucleic acids and complex assemblies. NDB can be used to perform searches based on annotations relating to sequence, str ...
G-quadruplex motifs and potentially G-quadruplex regulated genes
Prediction of viral microRNA candidate hairpins
Nearest Neighbor parameters for predicting RNA folding
RNA Characterization of Secondary Structure Motifs (RNA CoSSMos) database allows the systematic searching of all catalogued three-dimensional nucleic acid PDB structures that contain secondary structu ...
Predicted structures of internal transcribed spacer 2 (ITS2)
A database for the computation of atomic packing density values of protein structures
RNA SSTRAND contains known secondary structures of any type and organism. The ultimate goal of this database is to incorporate a comprehensive collection of known secondary structures, and to provide ...
Within this database you will to able to find more than 12,000 extracted three-dimensional junction and kissing loop structures as well as detailed annotations for each.
Database for binding affinities of protein-nucleic acid complexes and their mutants.
Structure-based interface library for macromolecules
Molecular Modeling of RNA Structure-From Base Pair Analysis in Crystals to Structure Prediction.
MINAS contains the exact geometric information on the first and second-shell coordinating ligands of every metal ion present in nucleic acid structures that are deposited in the PDB and NDB. Containin ...
A comprehensive database of toxic compounds
Database of flavors and scents