RNA Characterization of Secondary Structure Motifs
Names
More detailed information about this field from each metasource.
RNA Characterization of Secondary Structure Motifs
metasource: Fairsharing.org
version: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
RNA CoSSMos
metasource: Fairsharing.org
version: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
rna_cossmos
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
Names
More detailed information about this field from each metasource.
RNA Characterization of Secondary Structure Motifs
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
RNA CoSSMos
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
rna_cossmos
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
Other names: RNA CoSSMos, rna_cossmos
Names
More detailed information about this field from each metasource.
RNA Characterization of Secondary Structure Motifs
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
RNA CoSSMos
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
rna_cossmos
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
This source may no longer be available. No known URL could be resolved successfully.
RNA Characterization of Secondary Structure Motifs (RNA CoSSMos) database allows the systematic searching of all catalogued three-dimensional nucleic acid PDB structures that contain secondary structure motifs such as mismatches, (a)symmetric internal loops, hairpin loops, and bulge loops.
Description
More detailed information about this field from each metasource.
RNA Characterization of Secondary Structure Motifs (RNA CoSSMos) database allows the systematic searching of all catalogued three-dimensional nucleic acid PDB structures that contain secondary structure motifs such as mismatches, (a)symmetric internal loops, hairpin loops, and bulge loops.
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
RNA Characterization of Secondary Structure Motifs
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Characterization of Secondary Structure Motifs: a searchable database of secondary structure motifs in RNA three-dimensional structures.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
Webpage:
http://cossmos.slu.eduWebpage
More detailed information about this field from each metasource.
http://cossmos.slu.edu
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
http://cossmos.slu.edu/
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
Publications:
Publications
More detailed information about this field from each metasource.
RNA CoSSMos: Characterization of Secondary Structure Motifs--a searchable database of secondary structure motifs in RNA three-dimensional structures
PMID: 22127861
metasource: Fairsharing.org
version: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
http://dx.doi.org/10.1093/nar/GKR943
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
RNA CoSSMos: Characterization of Secondary Structure Motifs--a searchable database of secondary structure motifs in RNA three-dimensional structures
PMID: 22127861
metasource: Fairsharing.org
version: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
http://dx.doi.org/10.1093/nar/GKR943
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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RNA CoSSMos: Characterization of Secondary Structure Motifs--a searchable database of secondary structure motifs in RNA three-dimensional structures
PubMed citations: 19.
19 articles citing: RNA CoSSMos: Characterization of Secondary Structure Motifs--a searchable database of secondary structure motifs in RNA three-dimensional structures
RNA CoSSMos 2.0: an improved searchable database of secondary structure motifs in RNA three-dimensional structures. PMID:31950189
Identification and Characterization of New RNA Tetraloop Sequence Families. PMID:31714066
bpRNA: large-scale automated annotation and analysis of RNA secondary structure. PMID:29746666
Bioinformatics Study of Structural Patterns in Plant MicroRNA Precursors. PMID:28280737
Sequence-Based Prediction of RNA-Binding Residues in Proteins. PMID:27787829
Cellular Delivery of RNA Nanoparticles. PMID:27509068
URS DataBase: universe of RNA structures and their motifs. PMID:27242032
Computational investigation of RNA CUG repeats responsible for myotonic dystrophy 1. PMID:26500461
RNABP COGEST: a resource for investigating functional RNAs. PMID:25776022
RNA Bricks--a database of RNA 3D motifs and their interactions. PMID:24220091
Molecular crowding favors reactivity of a human ribozyme under physiological ionic conditions. PMID:24187989
Effect of sodium ions on RNA duplex stability. PMID:24106785
Automated classification of RNA 3D motifs and the RNA 3D Motif Atlas. PMID:23970545
High-affinity interaction of hnRNP A1 with conserved RNA structural elements is required for translation and replication of enterovirus 71. PMID:23727900
The four ingredients of single-sequence RNA secondary structure prediction. A unifying perspective. PMID:23695796
The nuclear magnetic resonance of CCCC RNA reveals a right-handed helix, and revised parameters for AMBER force field torsions improve structural predictions from molecular dynamics. PMID:23286901
Voronoia4RNA--a database of atomic packing densities of RNA structures and their complexes. PMID:23161674
2'-Fluoro RNA shows increased Watson-Crick H-bonding strength and stacking relative to RNA: evidence from NMR and thermodynamic data. PMID:23055396
The conformationally constrained N-methanocarba-dT analogue adopts an unexpected C4'-exo sugar pucker in the structure of a DNA hairpin. PMID:22409313 - http://dx.doi.org/10.1093/nar/GKR943
Tags:
Tags
More detailed information about this field from each metasource.
protein structure
metasource: Fairsharing.org
version: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ribonucleic acid
metasource: Fairsharing.org
version: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure
metasource: Fairsharing.org
version: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
nucleic acid structure
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
protein structural motifs and surfaces
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
rna
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
nucleic acid structure analysis
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
structure prediction
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
protein secondary structure
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:21.567213
Tags
More detailed information about this field from each metasource.
protein structure
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
ribonucleic acid
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure
metasource: Fairsharing.orgversion: FAIRsharing.org: RNA CoSSMos; RNA Characterization of Secondary Structure Motifs; DOI: https://doi.org/10.25504/FAIRsharing.vebj4e; Last edited: Jan. 8, 2019, 1:14 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
nucleic acid structure
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
protein structural motifs and surfaces
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
rna
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
nucleic acid structure analysis
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
structure prediction
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
protein secondary structure
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:21.567213
protein structure rna structure structure nucleic acid structure protein structural motifs and surfaces rna nucleic acid structure analysis structure prediction protein secondary structure
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