The Database of Human DNA Methylation and Cancer
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The Database of Human DNA Methylation and Cancer
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
MethyCancer
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
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The Database of Human DNA Methylation and Cancer
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
MethyCancer
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
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The Database of Human DNA Methylation and Cancer
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
MethyCancer
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
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The database of human DNA Methylation and Cancer (MethyCancer) is developed to study interplay of DNA methylation, gene expression and cancer. It hosts both highly integrated data of DNA methylation, cancer-related gene, mutation and cancer information from public resources, and the CpG Island (CGI) clones derived from our large-scale sequencing.
Description
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The database of human DNA Methylation and Cancer (MethyCancer) is developed to study interplay of DNA methylation, gene expression and cancer. It hosts both highly integrated data of DNA methylation, cancer-related gene, mutation and cancer information from public resources, and the CpG Island (CGI) clones derived from our large-scale sequencing.
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Links between DNA methylation levels and cancer
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Webpage:
http://methycancer.psych.ac.cn/Webpage
More detailed information about this field from each metasource.
http://methycancer.psych.ac.cn/
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications:
Publications
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MethyCancer: the database of human DNA methylation and cancer
PMID: 17890243
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications
More detailed information about this field from each metasource.
MethyCancer: the database of human DNA methylation and cancer
PMID: 17890243
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
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MethyCancer: the database of human DNA methylation and cancer
PubMed citations: 66.
66 articles citing: MethyCancer: the database of human DNA methylation and cancer
ImmuMethy, a database of DNA methylation plasticity at a single cytosine resolution in human blood and immune cells. PMID:35363305
Pan-Cancer Analysis Predicts FOXS1 as a Key Target in Prognosis and Tumor Immunotherapy. PMID:35241932
dbGENVOC: database of GENomic Variants of Oral Cancer, with special reference to India. PMID:34048545
Whole-genome bisulfite sequencing of abdominal adipose reveals DNA methylation pattern variations in broiler lines divergently selected for fatness. PMID:33373456
MethHC 2.0: information repository of DNA methylation and gene expression in human cancer. PMID:33270889
Systems Biology and Experimental Model Systems of Cancer. PMID:33086677
A computational and bioinformatic analysis of ACE2: an elucidation of its dual role in COVID-19 pathology and finding its associated partners as potential therapeutic targets. PMID:33073716
Regulatory Mechanisms of Epigenetic miRNA Relationships in Human Cancer and Potential as Therapeutic Targets. PMID:33050637
Computational methods and next-generation sequencing approaches to analyze epigenetics data: Profiling of methods and applications. PMID:32941995
Artificial Intelligence to Decode Cancer Mechanism: Beyond Patient Stratification for Precision Oncology. PMID:32903628
methCancer-gen: a DNA methylome dataset generator for user-specified cancer type based on conditional variational autoencoder. PMID:32393170
Construction of an integrated human osteosarcoma database, HOsDb, based on literature mining, microarray analysis, and database retrieval. PMID:32375685
EWAS Data Hub: a resource of DNA methylation array data and metadata. PMID:31584095
Genomics-Guided Immunotherapy for Precision Medicine in Cancer. PMID:31314580
DRUM: Inference of Disease-Associated m6A RNA Methylation Sites From a Multi-Layer Heterogeneous Network. PMID:31001320
Characterization of DNA Methylation Associated Gene Regulatory Networks During Stomach Cancer Progression. PMID:30778372
iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data. PMID:30567491
From Single Level Analysis to Multi-Omics Integrative Approaches: A Powerful Strategy towards the Precision Oncology. PMID:30373182
MeDReaders: a database for transcription factors that bind to methylated DNA. PMID:29145608
Lnc2Meth: a manually curated database of regulatory relationships between long non-coding RNAs and DNA methylation associated with human disease. PMID:29069510
Identification of key pathways and genes with aberrant methylation in prostate cancer using bioinformatics analysis. PMID:29066912
Genome-Wide Prediction of DNA Methylation Using DNA Composition and Sequence Complexity in Human. PMID:28212312
Integrating Epigenomics into the Understanding of Biomedical Insight. PMID:27980397
MethSMRT: an integrative database for DNA N6-methyladenine and N4-methylcytosine generated by single-molecular real-time sequencing. PMID:27924023
DiseaseMeth version 2.0: a major expansion and update of the human disease methylation database. PMID:27899673
NGSmethDB 2017: enhanced methylomes and differential methylation. PMID:27794041
Methylation of a panel of genes in peripheral blood leukocytes is associated with colorectal cancer. PMID:27453436
DREMECELS: A Curated Database for Base Excision and Mismatch Repair Mechanisms Associated Human Malignancies. PMID:27276067
Genome-wide DNA methylome variation in two genetically distinct chicken lines using MethylC-seq. PMID:26497311
Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers. PMID:26481356
EpiFactors: a comprehensive database of human epigenetic factors and complexes. PMID:26153137
A seven-gene CpG-island methylation panel predicts breast cancer progression. PMID:25986046
Biological databases for human research. PMID:25712261
Databases and web tools for cancer genomics study. PMID:25707591
MethHC: a database of DNA methylation and gene expression in human cancer. PMID:25398901
DDMGD: the database of text-mined associations between genes methylated in diseases from different species. PMID:25398897
Human cancer databases (review). PMID:25369839
MethBank: a database integrating next-generation sequencing single-base-resolution DNA methylation programming data. PMID:25294826
Genome-wide and gene-specific epigenomic platforms for hepatocellular carcinoma biomarker development trials. PMID:24829571
PCMdb: pancreatic cancer methylation database. PMID:24569397
DevMouse, the mouse developmental methylome database and analysis tools. PMID:24408217
NGSmethDB: an updated genome resource for high quality, single-cytosine resolution methylomes. PMID:24271385
EPITRANS: a database that integrates epigenome and transcriptome data. PMID:24213601
Combining position weight matrices and document-term matrix for efficient extraction of associations of methylated genes and diseases from free text. PMID:24147091
GeneSetDB: A comprehensive meta-database, statistical and visualisation framework for gene set analysis. PMID:23650583
CASP-8 -652 6N ins/del polymorphism and cancer risk: A literature-based systematic HuGE review and meta-analysis. PMID:23170140
Epstein-Barr virus-induced epigenetic alterations following transient infection. PMID:23047626
Genomic impact of cigarette smoke, with application to three smoking-related diseases. PMID:22989067
CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing data. PMID:22941633
The landscape for epigenetic/epigenomic biomedical resources. PMID:22874136
HEMD: an integrated tool of human epigenetic enzymes and chemical modulators for therapeutics. PMID:22761927
MethylomeDB: a database of DNA methylation profiles of the brain. PMID:22140101
DiseaseMeth: a human disease methylation database. PMID:22135302
Databases and bioinformatics tools for the study of DNA repair. PMID:22091405
Synthetic biology: an emerging research field in China. PMID:21729747
NID2 and HOXA9 promoter hypermethylation as biomarkers for prevention and early detection in oral cavity squamous cell carcinoma tissues and saliva. PMID:21558411
The tendency to recreate ancestral CG dinucleotides in the human genome. PMID:21208429
DAnCER: disease-annotated chromatin epigenetics resource. PMID:20876685
The most redundant sequences in human CpG island library are derived from mitochondrial genome. PMID:20691393
Principles and challenges of genomewide DNA methylation analysis. PMID:20125086
Network of Cancer Genes: a web resource to analyze duplicability, orthology and network properties of cancer genes. PMID:19906700
HLungDB: an integrated database of human lung cancer research. PMID:19900972
HHMD: the human histone modification database. PMID:19892823
MyBASE: a database for genome polymorphism and gene function studies of Mycobacterium. PMID:19228437
MethCancerDB--aberrant DNA methylation in human cancer. PMID:18253128
The Molecular Biology Database Collection: 2008 update. PMID:18025043
Tags:
Tags
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cancer
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
dna methylation
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
deoxyribonucleic acid
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene expression data
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
small molecule
metasource: Fairsharing.org
version: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
human genes and diseases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
cancer gene databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Tags
More detailed information about this field from each metasource.
cancer
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
dna methylation
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
deoxyribonucleic acid
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
gene expression data
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
small molecule
metasource: Fairsharing.orgversion: FAIRsharing.org: MethyCancer; The Database of Human DNA Methylation and Cancer; DOI: https://doi.org/10.25504/FAIRsharing.mtg4ew; Last edited: April 26, 2021, 8:38 a.m.; Last accessed: Jan 03 2022 7:07 p.m.
human genes and diseases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
cancer gene databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
cancer dna methylation dna gene gene expression small molecule human genes and diseases cancer-related genes
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