COLT-Cancer

Names

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COLT-Cancer

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:52.429369

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colt-cancer

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:52.429369

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Other names: colt-cancer

Essential gene profiles in human cancer cell lines

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Publications:

Publications

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COLT-Cancer: functional genetic screening resource for essential genes in human cancer cell lines
PMID: 22102578

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:52.429369

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http://dx.doi.org/10.1093/nar/GKR959

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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• COLT-Cancer: functional genetic screening resource for essential genes in human cancer cell lines PubMed citations: 33.

  33 articles citing: COLT-Cancer: functional genetic screening resource for essential genes in human cancer cell lines

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  Network controllability solutions for computational drug repurposing using genetic algorithms. PMID:35082323

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  NetControl4BioMed: A web-based platform for controllability analysis of protein-protein interaction networks. PMID:34352070

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  Multi-modal meta-analysis of cancer cell line omics profiles identifies ECHDC1 as a novel breast tumor suppressor. PMID:33750001

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  A network of human functional gene interactions from knockout fitness screens in cancer cells. PMID:30979825

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  NetControl4BioMed: a pipeline for biomedical data acquisition and analysis of network controllability. PMID:30066633

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  A transcriptome-wide association study of 229,000 women identifies new candidate susceptibility genes for breast cancer. PMID:29915430

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  A novel algorithm for finding optimal driver nodes to target control complex networks and its applications for drug targets identification. PMID:29363426

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  A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines. PMID:28988802

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  Controlling Directed Protein Interaction Networks in Cancer. PMID:28871116

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  Network Analysis Reveals A Signaling Regulatory Loop in the PIK3CA-mutated Breast Cancer Predicting Survival Outcome. PMID:28392480

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  Functional genomics reveals that tumors with activating phosphoinositide 3-kinase mutations are dependent on accelerated protein turnover. PMID:28087713

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  Integrative genomic and transcriptomic analysis for pinpointing recurrent alterations of plant homeodomain genes and their clinical significance in breast cancer. PMID:28055972

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  Genomic alterations underlie a pan-cancer metabolic shift associated with tumour hypoxia. PMID:27358048

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  Genomic profiling of murine mammary tumors identifies potential personalized drug targets for p53-deficient mammary cancers. PMID:27149990

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  Large-Scale Profiling of Kinase Dependencies in Cancer Cell Lines. PMID:26947069

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  ApoCanD: Database of human apoptotic proteins in the context of cancer. PMID:26861916

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  dbEM: A database of epigenetic modifiers curated from cancerous and normal genomes. PMID:26777304

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  Towards a compendium of essential genes - From model organisms to synthetic lethality in cancer cells. PMID:26627871

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  An integrated genomic analysis of Tudor domain-containing proteins identifies PHD finger protein 20-like 1 (PHF20L1) as a candidate oncogene in breast cancer. PMID:26588862

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  Public data and open source tools for multi-assay genomic investigation of disease. PMID:26463000

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  Genome-Wide Detection and Analysis of Multifunctional Genes. PMID:26436655

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  An integrated network platform for contextual prioritization of drugs and pathways. PMID:26315485

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  Oncogenic signaling in amphiregulin and EGFR-expressing PTEN-null human breast cancer. PMID:25454348

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  Identification by array comparative genomic hybridization of a new amplicon on chromosome 17q highly recurrent in BRCA1 mutated triple negative breast cancer. PMID:25416589

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  Dissecting the human protein-protein interaction network via phylogenetic decomposition. PMID:25412639

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  RNAi screening comes of age: improved techniques and complementary approaches. PMID:25145850

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  Chromosomal instability selects gene copy-number variants encoding core regulators of proliferation in ER+ breast cancer. PMID:24970479

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  Influence networks based on coexpression improve drug target discovery for the development of novel cancer therapeutics. PMID:24495353

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  Prediction of therapeutic microRNA based on the human metabolic network. PMID:24403541

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  The PIKfyve-ArPIKfyve-Sac3 triad in human breast cancer: Functional link between elevated Sac3 phosphatase and enhanced proliferation of triple negative cell lines. PMID:24070605

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  Survival of HER2-Positive Breast Cancer Cells: Receptor Signaling to Apoptotic Control Centers. PMID:24069506

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  ATARiS: computational quantification of gene suppression phenotypes from multisample RNAi screens. PMID:23269662

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  From cancer genomes to oncogenic drivers, tumour dependencies and therapeutic targets. PMID:22739505
• http://dx.doi.org/10.1093/nar/GKR959

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Tags

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human genes and diseases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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cancer gene databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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oncology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:52.429369

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human biology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:52.429369

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laboratory information management

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:52.429369

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mapping

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:52.429369

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human genes and diseases cancer-related genes oncology human laboratory information management mapping