Small Molecule Pathway Database
Names
More detailed information about this field from each metasource.
Small Molecule Pathway Database
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
SMPDB
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
formerly: PathBank
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
smpdb
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
Names
More detailed information about this field from each metasource.
Small Molecule Pathway Database
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
SMPDB
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
formerly: PathBank
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
smpdb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:36.593194
Other names: SMPDB, formerly: PathBank, smpdb
Names
More detailed information about this field from each metasource.
Small Molecule Pathway Database
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
SMPDB
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
formerly: PathBank
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
smpdb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:36.593194
The Small Molecule Pathway Database (SMPDB) contains small molecule pathways found in humans, which are presented visually. All SMPDB pathways include information on the relevant organs, subcellular compartments, protein cofactors, protein locations, metabolite locations, chemical structures and protein quaternary structures. Accompanying data includes detailed descriptions and references, providing an overview of the pathway, condition or processes depicted in each diagram.
Description
More detailed information about this field from each metasource.
The Small Molecule Pathway Database (SMPDB) contains small molecule pathways found in humans, which are presented visually. All SMPDB pathways include information on the relevant organs, subcellular compartments, protein cofactors, protein locations, metabolite locations, chemical structures and protein quaternary structures. Accompanying data includes detailed descriptions and references, providing an overview of the pathway, condition or processes depicted in each diagram.
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
Small Molecule Pathway Database
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Interactive, visual database containing more than 350 small-molecule pathways found in humans. It is designed specifically to support pathway elucidation and pathway discovery in clinical metabolomics, transcriptomics, proteomics and systems biology. It provides exquisitely detailed, hyperlinked diagrams of human metabolic pathways, metabolic disease pathways, metabolite signaling pathways and drug-action pathways.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:36.593194
Webpage:
http://www.smpdb.ca/Webpage
More detailed information about this field from each metasource.
http://www.smpdb.ca/
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
http://www.smpdb.ca
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
http://smpdb.ca/
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
Licence:
Name: ODCLicence name
More detailed information about this field from each metasource.
ODC
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
http://smpdb.ca/about#citing
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
SMPDB 2.0: big improvements to the Small Molecule Pathway Database
PMID: 24203708
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
SMPDB: The Small Molecule Pathway Database
PMID: 19948758
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
http://dx.doi.org/10.1093/nar/gkt1067
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
SMPDB 2.0: big improvements to the Small Molecule Pathway Database
PMID: 24203708
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
SMPDB: The Small Molecule Pathway Database
PMID: 19948758
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
http://dx.doi.org/10.1093/nar/gkt1067
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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SMPDB 2.0: big improvements to the Small Molecule Pathway Database
PubMed citations: 137.
137 articles citing: SMPDB 2.0: big improvements to the Small Molecule Pathway Database
TidyMass an object-oriented reproducible analysis framework for LC-MS data. PMID:35902589
Challenges and Limitations of Biological Network Analysis. PMID:35892929
HIF1α: A Novel Biomarker with Potential Prognostic and Immunotherapy in Pan-cancer. PMID:35860430
AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification. PMID:35745053
Network approaches for modeling the effect of drugs and diseases. PMID:35704883
Segmental Bronchial Allergen Challenge Elicits Distinct Metabolic Phenotypes in Allergic Asthma. PMID:35629885
Simultaneous targeting of glycolysis and oxidative phosphorylation as a therapeutic strategy to treat diffuse large B-cell lymphoma. PMID:35618788
Methyl Metabolism and the Clock: An Ancient Story With New Perspectives. PMID:35382619
MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses. PMID:35380657
The AOP-DB RDF: Applying FAIR Principles to the Semantic Integration of AOP Data Using the Research Description Framework. PMID:35295213
Targeted Metabolomic Analysis in Alzheimer's Disease Plasma and Brain Tissue in Non-Hispanic Whites. PMID:35253754
TrpNet: Understanding Tryptophan Metabolism across Gut Microbiome. PMID:35050132
Potential Molecular Mechanisms and Remdesivir Treatment for Acute Respiratory Syndrome Corona Virus 2 Infection/COVID 19 Through RNA Sequencing and Bioinformatics Analysis. PMID:34992355
Lead exposure and serum metabolite profiles in pregnant women in Mexico City. PMID:34893088
SBGNview: towards data analysis, integration and visualization on all pathways. PMID:34864890
ConsensusPathDB 2022: molecular interactions update as a resource for network biology. PMID:34850110
High-throughput mediation analysis of human proteome and metabolome identifies mediators of post-bariatric surgical diabetes control. PMID:34845204
Dysregulated Arginine Metabolism in Young Patients with Chronic Persistent Asthma and in Human Bronchial Epithelial Cells. PMID:34836371
Plants Metabolome Study: Emerging Tools and Techniques. PMID:34834772
Personal Metabolomics: A Global Challenge. PMID:34822372
Metabolome Characteristics of Liver Autophagy Deficiency under Starvation Conditions in Infancy. PMID:34578904
Regional lung metabolic profile in a piglet model of cardiopulmonary bypass with circulatory arrest. PMID:34553313
Metabolic effect of drought stress on the leaves of young oil palm (Elaeis guineensis) plants using UHPLC-MS and multivariate analysis. PMID:34521943
Metabolic Profiling of Plasma in Patients with Irritable Bowel Syndrome after a 4-Week Starch- and Sucrose-Reduced Diet. PMID:34357334
DysPIA: A Novel Dysregulated Pathway Identification Analysis Method. PMID:34290733
Representing a Heterogeneous Pharmaceutical Knowledge-Graph with Textual Information. PMID:34278204
Metabolomic and transcriptomic analysis reveals endogenous substrates and metabolic adaptation in rats lacking Abcg2 and Abcb1a transporters. PMID:34255797
ORA , FCS , and PT Strategies in Functional Enrichment Analysis. PMID:34236661
Identification of a Preliminary Plasma Metabolome-based Biomarker for Circadian Phase in Humans. PMID:34182829
Genome-wide discovery of hidden genes mediating known drug-disease association using KDDANet. PMID:34131148
Based on Plasma Metabonomics and Network Pharmacology Exploring the Therapeutic Mechanism of Gynura procumbens on Type 2 Diabetes. PMID:34122100
Predicting biological pathways of chemical compounds with a profile-inspired approach. PMID:34118870
netgsa: Fast computation and interactive visualization for topology-based pathway enrichment analysis. PMID:34115744
Interpreting the lipidome: bioinformatic approaches to embrace the complexity. PMID:34091802
High-resolution metabolomic biomarkers for lung cancer diagnosis and prognosis. PMID:34083687
Comprehensive Plasma Metabolomic Profile of Patients with Advanced Neuroendocrine Tumors (NETs). Diagnostic and Biological Relevance. PMID:34072010
Metabolic Profiling from an Asymptomatic Ferret Model of SARS-CoV-2 Infection. PMID:34069591
The BioCyc Metabolic Network Explorer. PMID:33882841
Artificial intelligence to deep learning: machine intelligence approach for drug discovery. PMID:33844136
Gaussian graphical modeling of the serum exposome and metabolome reveals interactions between environmental chemicals and endogenous metabolites. PMID:33828161
Metabolic Signature of Arrhythmogenic Cardiomyopathy. PMID:33805952
Plasma Metabolomic Profiling in 1391 Subjects with Overweight and Obesity from the SPHERE Study. PMID:33805234
Knowledge Beacons: Web services for data harvesting of distributed biomedical knowledge. PMID:33755673
Identification of potential and novel target genes in pituitary prolactinoma by bioinformatics analysis. PMID:33709028
Serum Metabolomics Study of Papillary Thyroid Carcinoma Based on HPLC-Q-TOF-MS/MS. PMID:33598460
A Multi-Platform Metabolomics Approach Identifies Urinary Metabolite Signatures That Differentiate Ketotic From Healthy Dairy Cows. PMID:33575283
Metabolic impact of weight variations in Icelandic horses. PMID:33575132
Causal relationships between genetically determined metabolites and human intelligence: a Mendelian randomization study. PMID:33563321
Bioinformatics analyses of significant genes, related pathways, and candidate diagnostic biomarkers and molecular targets in SARS-CoV-2/COVID-19. PMID:33553808
Metabolic profile distinguishes laminitis-susceptible and -resistant ponies before and after feeding a high sugar diet. PMID:33509165
Novel Metabolic Signatures of Prostate Cancer Revealed by 1H-NMR Metabolomics of Urine. PMID:33498542
Altered exosomal microRNA profiles in bronchoalveolar lavage fluid can mediate metabolism in patients with Acinetobacter baumannii ventilator-associated pneumonia. PMID:33437760
SkinBug: an artificial intelligence approach to predict human skin microbiome-mediated metabolism of biotics and xenobiotics. PMID:33385118
Using an Untargeted Metabolomics Approach to Identify Salivary Metabolites in Women with Breast Cancer. PMID:33322065
multiGSEA: a GSEA-based pathway enrichment analysis for multi-omics data. PMID:33287694
Epistasis-driven identification of SLC25A51 as a regulator of human mitochondrial NAD import. PMID:33262325
Identification of potential mRNA panels for severe acute respiratory syndrome coronavirus 2 (COVID-19) diagnosis and treatment using microarray dataset and bioinformatics methods. PMID:33251083
Workshop report: Toward the development of a human whole stool reference material for metabolomic and metagenomic gut microbiome measurements. PMID:33164148
VARAdb: a comprehensive variation annotation database for human. PMID:33095866
INTEDE: interactome of drug-metabolizing enzymes. PMID:33045737
Food Phenotyping: Recording and Processing of Non-Targeted Liquid Chromatography Mass Spectrometry Data for Verifying Food Authenticity. PMID:32878155
Metabolic Profiling Reveals Significant Perturbations of Intracellular Glucose Homeostasis in Enterovirus-Infected Cells. PMID:32717953
Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma. PMID:32649874
Integrated metabolomics and gut microbiome to the effects and mechanisms of naoxintong capsule on type 2 diabetes in rats. PMID:32616735
Differential Effects of Post-Weaning Diet and Maternal Obesity on Mouse Liver and Brain Metabolomes. PMID:32481497
CRY1-CBS binding regulates circadian clock function and metabolism. PMID:32383312
PG-path: Modeling and personalizing pharmacogenomics-based pathways. PMID:32365122
New markers for sepsis caused by Pseudomonas aeruginosa during burn infection. PMID:32170472
Serum metabolite profiles as potential biochemical markers in young adults with community-acquired pneumonia cured by moxifloxacin therapy. PMID:32157124
Metabolic alterations in the erythrocyte during blood-stage development of the malaria parasite. PMID:32103749
Integrative Metabolic Pathway Analysis Reveals Novel Therapeutic Targets in Osteoarthritis. PMID:31980557
Leveraging complementary computational models for prioritizing chemicals of developmental and reproductive toxicity concern: an example of food contact materials. PMID:31897520
Developing preliminary blood metabolomics-based biomarkers of insufficient sleep in humans. PMID:31894238
pathDIP 4: an extended pathway annotations and enrichment analysis resource for human, model organisms and domesticated species. PMID:31733064
Lomatogonium Rotatum for Treatment of Acute Liver Injury in Mice: A Metabolomics Study. PMID:31615066
PathBank: a comprehensive pathway database for model organisms. PMID:31602464
NMR Metabolomics Protocols for Drug Discovery. PMID:31463851
Mitochondrial oxidative stress-induced transcript variants of ATF3 mediate lipotoxic brain microvascular injury. PMID:31356870
Identification of important invasion and proliferation related genes in adrenocortical carcinoma. PMID:31321566
Exploring the Molecular Mechanism of the Drug-Treated Breast Cancer Based on Gene Expression Microarray. PMID:31311202
Intra- and inter-individual metabolic profiling highlights carnitine and lysophosphatidylcholine pathways as key molecular defects in type 2 diabetes. PMID:31273253
Genes with High Network Connectivity Are Enriched for Disease Heritability. PMID:31051114
Combined metabolic, phenomic and genomic data to prioritize atrial fibrillation-related metabolites. PMID:31007735
Modulation of Allergic Inflammation in the Nasal Mucosa of Allergic Rhinitis Sufferers With Topical Pharmaceutical Agents. PMID:31001114
Identification of atherosclerosis-related prioritizing metabolites based on a multi-omics composite network. PMID:30988716
Identification of Important Invasion-Related Genes in Non-functional Pituitary Adenomas. PMID:30982163
Mining Featured Biomarkers Linked with Epithelial Ovarian CancerBased on Bioinformatics. PMID:30970615
Elucidation of Novel Therapeutic Targets for Acute Myeloid Leukemias with RUNX1-RUNX1T1 Fusion. PMID:30959925
Metabolic reaction network-based recursive metabolite annotation for untargeted metabolomics. PMID:30944337
Prioritization of candidate metabolites for postmenopausal osteoporosis using multi-omics composite network. PMID:30936988
Unsupervised classification of multi-omics data during cardiac remodeling using deep learning. PMID:30853547
Identification of Key Metabolites for Acute Lung Injury in Patients with Sepsis. PMID:30847314
Identification of bioactive metabolites using activity metabolomics. PMID:30814649
Metabolomics Approaches for the Diagnosis and Understanding of Kidney Diseases. PMID:30769897
iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data. PMID:30567491
ChemDIS 2: an update of chemical-disease inference system. PMID:30053236
ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures. PMID:29968796
MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis. PMID:29762782
MetaboDiff: an R package for differential metabolomic analysis. PMID:29718102
The role of the Human Metabolome Database in inborn errors of metabolism. PMID:29663269
RaMP: A Comprehensive Relational Database of Metabolomics Pathways for Pathway Enrichment Analysis of Genes and Metabolites. PMID:29470400
Metabolomics and Precision Medicine in Trauma: The State of the Field. PMID:29280924
Usefulness of Amino Acid Profiling in Ovarian Cancer Screening with Special Emphasis on Their Role in Cancerogenesis. PMID:29258187
HMDB 4.0: the human metabolome database for 2018. PMID:29140435
Chemical Similarity Enrichment Analysis (ChemRICH) as alternative to biochemical pathway mapping for metabolomic datasets. PMID:29109515
PAMDB: a comprehensive Pseudomonas aeruginosa metabolome database. PMID:29106626
LiverWiki: a wiki-based database for human liver. PMID:29029599
Advances in metabolome information retrieval: turning chemistry into biology. Part II: biological information recovery. PMID:28842777
Microarray analysis reveals key genes and pathways in Tetralogy of Fallot. PMID:28713939
Tetrahydrobiopterin regulates monoamine neurotransmitter sulfonation. PMID:28630292
NMR-based Metabolomics Analysis of Liver from C57BL/6 Mouse Exposed to Ionizing Radiation. PMID:28463589
Metabolic risk management, physical exercise and lifestyle counselling in low-active adults: controlled randomized trial (BELLUGAT). PMID:28292282
A Web Tool for Generating High Quality Machine-readable Biological Pathways. PMID:28287524
A Comprehensive Gene Expression Meta-analysis Identifies Novel Immune Signatures in Rheumatoid Arthritis Patients. PMID:28210261
Systematic analyses of drugs and disease indications in RepurposeDB reveal pharmacological, biological and epidemiological factors influencing drug repositioning. PMID:28200013
Epigenetic profiling of human brain differential DNA methylation networks in schizophrenia. PMID:28117656
pathDIP: an annotated resource for known and predicted human gene-pathway associations and pathway enrichment analysis. PMID:27899558
miRPathDB: a new dictionary on microRNAs and target pathways. PMID:27742822
Exploring human disease using the Rat Genome Database. PMID:27736745
Increasing rigor in NMR-based metabolomics through validated and open source tools. PMID:27643760
Clinical Metabolomics: The New Metabolic Window for Inborn Errors of Metabolism Investigations in the Post-Genomic Era. PMID:27447622
Pharmacometabonomic Prediction of Busulfan Clearance in Hematopoetic Cell Transplant Recipients. PMID:27350098
Comprehensive coverage of cardiovascular disease data in the disease portals at the Rat Genome Database. PMID:27287925
Practical aspects of NGS-based pathways analysis for personalized cancer science and medicine. PMID:27191992
Mice carrying a human GLUD2 gene recapitulate aspects of human transcriptome and metabolome development. PMID:27118840
Novel personalized pathway-based metabolomics models reveal key metabolic pathways for breast cancer diagnosis. PMID:27036109
Cancer Metabolomics and the Human Metabolome Database. PMID:26950159
ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts. PMID:26794319
Global Prioritization of Disease Candidate Metabolites Based on a Multi-omics Composite Network. PMID:26598063
ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli. PMID:26481353
Cheminformatics Research at the Unilever Centre for Molecular Science Informatics Cambridge. PMID:26435758
PhIN: A Protein Pharmacology Interaction Network Database. PMID:26225242
Drug-Path: a database for drug-induced pathways. PMID:26130661
Pathways with PathWhiz. PMID:25934797
MetaboAnalyst 3.0--making metabolomics more meaningful. PMID:25897128
Analytical methods in untargeted metabolomics: state of the art in 2015. PMID:25798438
The 2014 Nucleic Acids Research Database Issue and an updated NAR online Molecular Biology Database Collection. PMID:24316579 -
SMPDB: The Small Molecule Pathway Database
PubMed citations: 132.
132 articles citing: SMPDB: The Small Molecule Pathway Database
HIF1α: A Novel Biomarker with Potential Prognostic and Immunotherapy in Pan-cancer. PMID:35860430
Leveraging metabolic modeling to identify functional metabolic alterations associated with COVID-19 disease severity. PMID:35819731
Murine Falcor/LL35 lncRNA Contributes to Glucose and Lipid Metabolism In Vitro and In Vivo. PMID:35740417
Targeted Microchip Capillary Electrophoresis-Orbitrap Mass Spectrometry Metabolomics to Monitor Ovarian Cancer Progression. PMID:35736465
Metapone: a Bioconductor package for joint pathway testing for untargeted metabolomics data. PMID:35639952
Circulating Metabolites as Biomarkers of Disease in Patients with Mesial Temporal Lobe Epilepsy. PMID:35629950
Predictive Modeling of Alzheimer's and Parkinson's Disease Using Metabolomic and Lipidomic Profiles from Cerebrospinal Fluid. PMID:35448464
Methylated Cytochrome P450 and the Solute Carrier Family of Genes Correlate With Perturbations in Bile Acid Metabolism in Parkinson's Disease. PMID:35431771
Bioengineered models of Parkinson's disease using patient-derived dopaminergic neurons exhibit distinct biological profiles in a 3D microenvironment. PMID:35044538
Assessing Causal Relationship Between Human Blood Metabolites and Five Neurodegenerative Diseases With GWAS Summary Statistics. PMID:34955704
Loss of microRNA-135b Enhances Bone Metastasis in Prostate Cancer and Predicts Aggressiveness in Human Prostate Samples. PMID:34944822
Dysregulated Arginine Metabolism in Young Patients with Chronic Persistent Asthma and in Human Bronchial Epithelial Cells. PMID:34836371
Personal Metabolomics: A Global Challenge. PMID:34822372
Evaluating Causal Relationship Between Metabolites and Six Cardiovascular Diseases Based on GWAS Summary Statistics. PMID:34721534
Studies on Novel Diagnostic and Predictive Biomarkers of Intrahepatic Cholestasis of Pregnancy Through Metabolomics and Proteomics. PMID:34721396
Toxicometabolomics: Small Molecules to Answer Big Toxicological Questions. PMID:34677407
High-coverage metabolomics uncovers microbiota-driven biochemical landscape of interorgan transport and gut-brain communication in mice. PMID:34667167
A survey on computational methods in discovering protein inhibitors of SARS-CoV-2. PMID:34623382
Using a Two-Sample Mendelian Randomization Method in Assessing the Causal Relationships Between Human Blood Metabolites and Heart Failure. PMID:34595216
Regional lung metabolic profile in a piglet model of cardiopulmonary bypass with circulatory arrest. PMID:34553313
Characterization of fecal metabolome changes in patients with obstructive sleep apnea. PMID:34534066
Grading of endometrial cancer using 1H HR-MAS NMR-based metabolomics. PMID:34518615
A Metabolomic Aging Clock Using Human Cerebrospinal Fluid. PMID:34382643
Transcriptomic, proteomic, and metabolomic analyses identify candidate pathways linking maternal cadmium exposure to altered neurodevelopment and behavior. PMID:34381081
Computational strategies for the discovery of biological functions of health foods, nutraceuticals and cosmeceuticals: a review. PMID:34258685
Metabolomic profiles of being physically active and less sedentary: a critical review. PMID:34245373
Translocated microbiome composition determines immunological outcome in treated HIV infection. PMID:34237254
NFnetFu: A novel workflow for microbiome data fusion. PMID:34216888
Metabolic Dynamics in Short- and Long-Term Microgravity in Human Primary Macrophages. PMID:34201720
Evolving scenario of big data and Artificial Intelligence (AI) in drug discovery. PMID:34159484
Metabolome subtyping of severe bronchiolitis in infancy and risk of childhood asthma. PMID:34119532
Systems Analysis of Gut Microbiome Influence on Metabolic Disease in HIV-Positive and High-Risk Populations. PMID:34006628
Prednisolone Alters Endometrial Decidual Cells and Affects Decidual-Trophoblast Interactions. PMID:33898438
Microbial Metabolomics: From Methods to Translational Applications. PMID:33791977
A Multi-Platform Metabolomics Approach Identifies Urinary Metabolite Signatures That Differentiate Ketotic From Healthy Dairy Cows. PMID:33575283
CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models. PMID:33513132
Novel Metabolic Signatures of Prostate Cancer Revealed by 1H-NMR Metabolomics of Urine. PMID:33498542
A multi-omics approach to Epstein-Barr virus immortalization of B-cells reveals EBNA1 chromatin pioneering activities targeting nucleotide metabolism. PMID:33497421
Altered exosomal microRNA profiles in bronchoalveolar lavage fluid can mediate metabolism in patients with Acinetobacter baumannii ventilator-associated pneumonia. PMID:33437760
Metabolomics of primary cutaneous melanoma and matched adjacent extratumoral microenvironment. PMID:33108391
Dendritic Cells and Microglia Have Non-redundant Functions in the Inflamed Brain with Protective Effects of Type 1 cDCs. PMID:33086061
Circulating Metabolites as Potential Biomarkers for Neurological Disorders-Metabolites in Neurological Disorders. PMID:33003305
Applications of Genome-Wide Screening and Systems Biology Approaches in Drug Repositioning. PMID:32967266
Genetically Determined Levels of Serum Metabolites and Risk of Neuroticism: A Mendelian Randomization Study. PMID:32808022
HISTome2: a database of histone proteins, modifiers for multiple organisms and epidrugs. PMID:32746900
Advancing computer-aided drug discovery (CADD) by big data and data-driven machine learning modeling. PMID:32663517
Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma. PMID:32649874
PG-path: Modeling and personalizing pharmacogenomics-based pathways. PMID:32365122
Discovery of Pancreatic Adenocarcinoma Biomarkers by Untargeted Metabolomics. PMID:32325731
Effect of L-Ergothioneine on the metabolic plasma profile of the RUPP rat model of pre-eclampsia. PMID:32231385
Serum metabolite profiles as potential biochemical markers in young adults with community-acquired pneumonia cured by moxifloxacin therapy. PMID:32157124
Targeting glioma-initiating cells via the tyrosine metabolic pathway. PMID:32059178
Assessing the Causal Effects of Human Serum Metabolites on 5 Major Psychiatric Disorders. PMID:31919502
Metabolomic profile overlap in prototypical autoimmune humoral disease: a comparison of myasthenia gravis and rheumatoid arthritis. PMID:31902059
Steroidomics for the Prevention, Assessment, and Management of Cancers: A Systematic Review and Functional Analysis. PMID:31546652
Metabolomic profiling identifies novel biomarkers and mechanisms in human bladder cancer treated with submucosal injection of gemcitabine. PMID:31545404
NMR metabolomics identifies over 60 biomarkers associated with Type II Diabetes impairment in db/db mice. PMID:31179513
Integrative Metabolomic and Transcriptomic Analysis for the Study of Bladder Cancer. PMID:31100982
Yin Yang 1 sustains biosynthetic demands during brain development in a stage-specific manner. PMID:31097699
Modulation of Allergic Inflammation in the Nasal Mucosa of Allergic Rhinitis Sufferers With Topical Pharmaceutical Agents. PMID:31001114
Juice Index: an integrated Sauvignon blanc grape and wine metabolomics database shows mainly seasonal differences. PMID:30830411
Metabolomics Approaches for the Diagnosis and Understanding of Kidney Diseases. PMID:30769897
Comparative transcriptomic profile of tolerogenic dendritic cells differentiated with vitamin D3, dexamethasone and rapamycin. PMID:30297862
MetExplore: collaborative edition and exploration of metabolic networks. PMID:29718355
Discovery of urinary biomarkers to discriminate between exogenous and semi-endogenous thiouracil in cattle: A parallel-like randomized design. PMID:29649241
RaMP: A Comprehensive Relational Database of Metabolomics Pathways for Pathway Enrichment Analysis of Genes and Metabolites. PMID:29470400
Muscle molecular adaptations to endurance exercise training are conditioned by glycogen availability: a proteomics-based analysis in the McArdle mouse model. PMID:29315579
Evaluation and comparison of bioinformatic tools for the enrichment analysis of metabolomics data. PMID:29291722
Metabolomics and Precision Medicine in Trauma: The State of the Field. PMID:29280924
Eight Kinetically Stable but Thermodynamically Activated Molecules that Power Cell Metabolism. PMID:29272116
Usefulness of Amino Acid Profiling in Ovarian Cancer Screening with Special Emphasis on Their Role in Cancerogenesis. PMID:29258187
In-Cardiome: integrated knowledgebase for coronary artery disease enabling translational research. PMID:29220465
Differential prioritization of therapies to subtypes of triple negative breast cancer using a systems medicine method. PMID:29190967
HMDB 4.0: the human metabolome database for 2018. PMID:29140435
Microarray analysis reveals key genes and pathways in Tetralogy of Fallot. PMID:28713939
Development and Validation of a High-Throughput Mass Spectrometry Based Urine Metabolomic Test for the Detection of Colonic Adenomatous Polyps. PMID:28640228
Involvement of a gut-retina axis in protection against dietary glycemia-induced age-related macular degeneration. PMID:28507131
Metabolic risk management, physical exercise and lifestyle counselling in low-active adults: controlled randomized trial (BELLUGAT). PMID:28292282
Drug voyager: a computational platform for exploring unintended drug action. PMID:28241745
Revealing disease-associated pathways by network integration of untargeted metabolomics. PMID:27479327
Use of Plasma Metabolomics to Identify Diagnostic Biomarkers for Early Stage Epithelial Ovarian Cancer. PMID:27390602
Utilizing yeast chemogenomic profiles for the prediction of pharmacogenomic associations in humans. PMID:27025271
Glutathione biosynthesis is upregulated at the initiation of MYCN-driven neuroblastoma tumorigenesis. PMID:26996379
Transcriptional profiling revealed the anti-proliferative effect of MFN2 deficiency and identified risk factors in lung adenocarcinoma. PMID:26733181
Metabolite Signatures in Hydrophilic Extracts of Mouse Lungs Exposed to Cigarette Smoke Revealed by 1H NMR Metabolomics Investigation. PMID:26609465
Metastatic Melanoma Induced Metabolic Changes in C57BL/6J Mouse Stomach Measured by 1H NMR Spectroscopy. PMID:26246958
Using gene expression signatures to identify novel treatment strategies in gulf war illness. PMID:26156520
Drug-Path: a database for drug-induced pathways. PMID:26130661
Pathways with PathWhiz. PMID:25934797
Neurochemical Metabolomics Reveals Disruption to Sphingolipid Metabolism Following Chronic Haloperidol Administration. PMID:25850894
Module-based association analysis for omics data with network structure. PMID:25822417
PathCards: multi-source consolidation of human biological pathways. PMID:25725062
1H NMR Metabolomics Study of Metastatic Melanoma in C57BL/6J Mouse Spleen. PMID:25383071
T3DB: the toxic exposome database. PMID:25378312
MPINet: metabolite pathway identification via coupling of global metabolite network structure and metabolomic profile. PMID:25057481
Metabolomic data streaming for biology-dependent data acquisition. PMID:24911492
MetDisease--connecting metabolites to diseases via literature. PMID:24713438
Computational tools for the secondary analysis of metabolomics experiments. PMID:24688685
Profile of Circulatory Metabolites in a Relapsing-remitting Animal Model of Multiple Sclerosis using Global Metabolomics. PMID:24273690
DrugBank 4.0: shedding new light on drug metabolism. PMID:24203711
SMPDB 2.0: big improvements to the Small Molecule Pathway Database. PMID:24203708
The human urine metabolome. PMID:24023812
Analyzing LC/MS metabolic profiling data in the context of existing metabolic networks. PMID:24010053
GeneSetDB: A comprehensive meta-database, statistical and visualisation framework for gene set analysis. PMID:23650583
Recent progress in the development of metabolome databases for plant systems biology. PMID:23577015
Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review. PMID:23384594
Chapter 3: Small molecules and disease. PMID:23300405
HMDB 3.0--The Human Metabolome Database in 2013. PMID:23161693
The ConsensusPathDB interaction database: 2013 update. PMID:23143270
ECMDB: the E. coli Metabolome Database. PMID:23109553
Exploring chemical space for drug discovery using the chemical universe database. PMID:23019491
Online tools for bioinformatics analyses in nutrition sciences. PMID:22983844
Public domain databases for medicinal chemistry. PMID:22731701
MetaMapp: mapping and visualizing metabolomic data by integrating information from biochemical pathways and chemical and mass spectral similarity. PMID:22591066
MetaboAnalyst 2.0--a comprehensive server for metabolomic data analysis. PMID:22553367
In-silico studies in Chinese herbal medicines' research: evaluation of in-silico methodologies and phytochemical data sources, and a review of research to date. PMID:22326356
KB-Rank: efficient protein structure and functional annotation identification via text query. PMID:22270457
IPAVS: Integrated Pathway Resources, Analysis and Visualization System. PMID:22140115
MMMDB: Mouse Multiple Tissue Metabolome Database. PMID:22139941
Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data. PMID:22135418
YMDB: the Yeast Metabolome Database. PMID:22064855
Metabonomics-based omics study and atherosclerosis. PMID:22040517
The emerging field of quantitative blood metabolomics for biomarker discovery in critical illnesses. PMID:21680948
A sulfur amino acid-free meal increases plasma lipids in humans. PMID:21677075
Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst. PMID:21637195
Extending biochemical databases by metabolomic surveys. PMID:21566124
A new approach to assess and predict the functional roles of proteins across all known structures. PMID:21445639
DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. PMID:21059682
Metabolic consequences of sepsis-induced acute lung injury revealed by plasma ¹H-nuclear magnetic resonance quantitative metabolomics and computational analysis. PMID:20889676
Molecular diagnostics in transplantation. PMID:20736923
MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data. PMID:20457745
Xenobiotic metabolism: a view through the metabolometer. PMID:20232918 - http://dx.doi.org/10.1093/nar/gkt1067
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Tags
More detailed information about this field from each metasource.
chemical entity
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
chemical structure
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metabolite
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
pathway model
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein structure
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
small molecule
metasource: Fairsharing.org
version: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metabolic and signaling pathways
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metabolic pathways
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
chemoinformatics
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
drug-action pathway
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolic disease pathway
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolic pathway
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolite signaling pathway
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolomics
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
molecular biology
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
proteomics
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
systems biology
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
transcriptomics
metasource: re3data.org
version: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
small molecules
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
molecular interactions, pathways and networks
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
endocrinology and metabolism
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
pathology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
Tags
More detailed information about this field from each metasource.
chemical entity
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
chemical structure
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metabolite
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
pathway model
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
protein structure
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
small molecule
metasource: Fairsharing.orgversion: FAIRsharing.org: SMPDB; Small Molecule Pathway Database; DOI: https://doi.org/10.25504/FAIRsharing.y1zyaq; Last edited: Jan. 8, 2019, 1:17 p.m.; Last accessed: Jan 03 2022 7:09 p.m.
metabolic and signaling pathways
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metabolic pathways
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
chemoinformatics
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
drug-action pathway
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolic disease pathway
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolic pathway
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolite signaling pathway
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metabolomics
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:36.593194
molecular biology
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
proteomics
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
systems biology
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
transcriptomics
metasource: re3data.orgversion: re3data.org: Small Molecule Pathway Database; editing status 2021-09-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TB93 last accessed: 2022-11-04
small molecules
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:36.593194
molecular interactions, pathways and networks
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:36.593194
endocrinology and metabolism
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:36.593194
pathology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:36.593194
chemical entity chemical structure metabolite pathway model protein structure small molecule metabolic and signaling pathways metabolic and signaling pathways chemoinformatics drug-action pathway metabolic disease pathway metabolic pathway metabolite signaling pathway metabolomics molecular biology proteomics systems biology transcriptomics small molecule molecular interactions, pathways and networks endocrinology and metabolism pathology
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