Large-scale regulatory and signaling network assembly through linked open data.
PMID:33459761
Using set theory to reduce redundancy in pathway sets.
PMID:30340461
Computational dynamic approaches for temporal omics data with applications to systems medicine.
PMID:28638442
miRTar2GO: a novel rule-based model learning method for cell line specific microRNA target prediction that integrates Ago2 CLIP-Seq and validated microRNA-target interaction data.
PMID:27903911
Databases and tools for constructing signal transduction networks in cancer.
PMID:27502015
MONGKIE: an integrated tool for network analysis and visualization for multi-omics data.
PMID:26987515
Gene-based and pathway-based genome-wide association study of alcohol dependence.
PMID:26120261
PathCards: multi-source consolidation of human biological pathways.
PMID:25725062
Comparison of human cell signaling pathway databases--evolution, drawbacks and challenges.
PMID:25632107
ReNE: a cytoscape plugin for regulatory network enhancement.
PMID:25541727
Short-term airborne particulate matter exposure alters the epigenetic landscape of human genes associated with the mitogen-activated protein kinase network: a cross-sectional study.
PMID:25395096
Integrated pathway clusters with coherent biological themes for target prioritisation.
PMID:24918583
Pathway-driven discovery of rare mutational impact on cancer.
PMID:24883302
Using biological pathway data with paxtools.
PMID:24068901
Functional characterization of motif sequences under purifying selection.
PMID:23303791
Pathway Distiller - multisource biological pathway consolidation.
PMID:23134636
IPAD: the Integrated Pathway Analysis Database for Systematic Enrichment Analysis.
PMID:23046449
Dynamical systems approach to endothelial heterogeneity.
PMID:22723222
Context-specific protein network miner--an online system for exploring context-specific protein interaction networks from the literature.
PMID:22493694