Sequence Ontology
Names
More detailed information about this field from each metasource.
Sequence Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
SO
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
Sequence Types and Features Ontology
metasource: Biontology / Bioportal
version: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
Names
More detailed information about this field from each metasource.
Sequence Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
SO
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
Sequence Types and Features Ontology
metasource: Biontology / Bioportalversion: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
Other names: SO, Sequence Types and Features Ontology
Names
More detailed information about this field from each metasource.
Sequence Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
SO
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
Sequence Types and Features Ontology
metasource: Biontology / Bioportalversion: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
SO is a collaborative ontology project for the definition of sequence features used in biological sequence annotation. The Sequence Ontology is a set of terms and relationships used to describe the features and attributes of biological sequence. SO includes different kinds of features which can be located on the sequence.
Description
More detailed information about this field from each metasource.
SO is a collaborative ontology project for the definition of sequence features used in biological sequence annotation. The Sequence Ontology is a set of terms and relationships used to describe the features and attributes of biological sequence. SO includes different kinds of features which can be located on the sequence.
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
SO is a collaborative ontology project for the definition of sequence features used in biological sequence annotation. SO was initially developed by the Gene Ontology Consortium. Contributors to SO include the GMOD community, model organism database groups such as WormBase, FlyBase, Mouse Genome Informatics group, and institutes such as the Sanger Institute and the EBI. Input to SO is welcomed from the sequence annotation community. The OBO revision is available here: http://sourceforge.net/p/song/svn/HEAD/tree/
metasource: Biontology / Bioportalversion: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
Webpage:
http://www.sequenceontology.org/Webpage
More detailed information about this field from each metasource.
http://www.sequenceontology.org/
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
http://www.sequenceontology.org
metasource: Biontology / Bioportalversion: unknown extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/SO
Licence:
Name: Creative Commons Attribution 4.0 International (CC BY 4.0)Licence name
More detailed information about this field from each metasource.
Creative Commons Attribution 4.0 International (CC BY 4.0)
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/licenses/by/4.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
The Sequence Ontology: a tool for the unification of genome annotations
PMID: 15892872
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
A standard variation file format for human genome sequences
PMID: 20796305
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Evolution of the Sequence Ontology terms and relationships
PMID: 20226267
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications
More detailed information about this field from each metasource.
The Sequence Ontology: a tool for the unification of genome annotations
PMID: 15892872
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
A standard variation file format for human genome sequences
PMID: 20796305
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Evolution of the Sequence Ontology terms and relationships
PMID: 20226267
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
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The Sequence Ontology: a tool for the unification of genome annotations
PubMed citations: 340.
340 articles citing: The Sequence Ontology: a tool for the unification of genome annotations
HumanMine: advanced data searching, analysis and cross-species comparison. PMID:35820040
Analysis of the landscape of human enhancer sequences in biological databases. PMID:35685360
Deep whole-genome resequencing sheds light on the distribution and effect of amphioxus SNPs. PMID:35395709
JaponicusDB: rapid deployment of a model organism database for an emerging model species. PMID:35380656
Parallel sequence tagging for concept recognition. PMID:35331131
Middle Eastern Genetic Variation Improves Clinical Annotation of the Human Genome. PMID:35330423
FlyBase: a guided tour of highlighted features. PMID:35266522
Fission stories: using PomBase to understand Schizosaccharomyces pombe biology. PMID:35100366
Petabase-scale sequence alignment catalyses viral discovery. PMID:35082445
Contribution of 3D genome topological domains to genetic risk of cancers: a genome-wide computational study. PMID:35016721
Integration of mRNA and miRNA Analysis Reveals the Molecular Mechanism of Cotton Response to Salt Stress. PMID:34956267
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources. PMID:34897464
RefSeq Functional Elements as experimentally assayed nongenic reference standards and functional interactions in human and mouse. PMID:34876495
No one tool to rule them all: Prokaryotic gene prediction tool annotations are highly dependent on the organism of study. PMID:34875010
Sequencing-based genome-wide association studies reporting standards. PMID:34870259
Scalable analysis of multi-modal biomedical data. PMID:34508579
Murine allele and transgene symbols: ensuring unique, concise, and informative nomenclature. PMID:34389871
ECO-CollecTF: A Corpus of Annotated Evidence-Based Assertions in Biomedical Manuscripts. PMID:34327299
Proteomic Identification of Bombyx mori Organelles Using the Engineered Ascorbate Peroxidase APEX and Development of Silkworm Organelle Proteome Database (SilkOrganPDB). PMID:34068790
Rare variants discovery by extensive whole-genome sequencing of the Han Chinese population in Taiwan: Applications to cardiovascular medicine. PMID:34026292
Learning adaptive representations for entity recognition in the biomedical domain. PMID:34001263
CoffeeProt: an online tool for correlation and functional enrichment of systems genetics data. PMID:33978718
In silico candidate variant and gene identification using inbred mouse strains. PMID:33763305
Named Data Networking for Genomics Data Management and Integrated Workflows. PMID:33748749
BSGatlas: a unified Bacillus subtilis genome and transcriptome annotation atlas with enhanced information access. PMID:33539279
biotoolsSchema: a formalized schema for bioinformatics software description. PMID:33506265
Detection of aberrant splicing events in RNA-seq data using FRASER. PMID:33483494
A review on viral data sources and search systems for perspective mitigation of COVID-19. PMID:33348368
The Cyclically Seasonal Drosophila subobscura Inversion O7 Originated From Fragile Genomic Sites and Relocated Immunity and Metabolic Genes. PMID:33193649
Galaxy and Apollo as a biologist-friendly interface for high-quality cooperative phage genome annotation. PMID:33137082
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. PMID:33106848
The Synthetic Biology Open Language (SBOL) Version 3: Simplified Data Exchange for Bioengineering. PMID:33015004
A large-scale genome-lipid association map guides lipid identification. PMID:32958938
Machado: Open source genomics data integration framework. PMID:32930331
Patterns of DNA variation between the autosomes, the X chromosome and the Y chromosome in Bos taurus genome. PMID:32788585
Population-scale proteome variation in human induced pluripotent stem cells. PMID:32773033
BiPOm: a rule-based ontology to represent and infer molecule knowledge from a biological process-centered viewpoint. PMID:32703160
Redefining fundamental concepts of transcription initiation in bacteria. PMID:32665585
The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). PMID:32637990
Longitudinal Analysis of Gene Expression Changes During Cervical Carcinogenesis Reveals Potential Therapeutic Targets. PMID:32489245
Data-driven Sublanguage Analysis for Cancer Genomics Knowledge Modeling: Applications in Mining Oncological Genetics Information from Patients' Genetic Reports. PMID:32477695
Exome-Wide Analysis of the DiscovEHR Cohort Reveals Novel Candidate Pharmacogenomic Variants for Clinical Pharmacogenomics. PMID:32443490
FHIR Genomics: enabling standardization for precision medicine use cases. PMID:32194985
MiR-210-3p-EphrinA3-PI3K/AKT axis regulates the progression of oral cancer. PMID:32180353
Variant Interpretation for Dilated Cardiomyopathy: Refinement of the American College of Medical Genetics and Genomics/ClinGen Guidelines for the DCM Precision Medicine Study. PMID:32160020
Genetic Diversity, Population Structure and Linkage Disequilibrium Assessment among International Sunflower Breeding Collections. PMID:32155892
Blood RNA analysis can increase clinical diagnostic rate and resolve variants of uncertain significance. PMID:32123317
Organizing genome engineering for the gigabase scale. PMID:32019919
Osteogenesis imperfecta in a male holstein calf associated with a possible oligogenic origin. PMID:31980012
Cyberinfrastructure and resources to enable an integrative approach to studying forest trees. PMID:31892954
Formal axioms in biomedical ontologies improve analysis and interpretation of associated data. PMID:31821406
GenoSurf: metadata driven semantic search system for integrated genomic datasets. PMID:31820804
Standard operating procedure for curation and clinical interpretation of variants in cancer. PMID:31779674
Extension modules for storage, visualization and querying of genomic, genetic and breeding data in Tripal databases. PMID:31725859
The Empusa code generator and its application to GBOL, an extendable ontology for genome annotation. PMID:31685817
SCNBase: a genomics portal for the soybean cyst nematode (Heterodera glycines). PMID:31680133
A unicellular relative of animals generates a layer of polarized cells by actomyosin-dependent cellularization. PMID:31647412
Bovine Genome Database: new annotation tools for a new reference genome. PMID:31647100
Functional rare variants influence the clinical response to anti-TNF therapy in Crohn's disease. PMID:31598133
Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API. PMID:31504201
fagin: synteny-based phylostratigraphy and finer classification of young genes. PMID:31455236
gFACs: Gene Filtering, Analysis, and Conversion to Unify Genome Annotations Across Alignment and Gene Prediction Frameworks. PMID:31437583
Beyond sequencing: re-visiting annotations for PJL as a test case. PMID:31366397
Communicating Structure and Function in Synthetic Biology Diagrams. PMID:31348656
Tripal v3: an ontology-based toolkit for construction of FAIR biological community databases. PMID:31328773
A Novel Gene Underlies Bleomycin-Response Variation in Caenorhabditis elegans. PMID:31171655
Flexible and scalable diagnostic filtering of genomic variants using G2P with Ensembl VEP. PMID:31147538
Pergola-web: a web server for the visualization and analysis of longitudinal behavioral data using repurposed genomics tools and standards. PMID:31106365
The Transcriptomic Toolbox: Resources for Interpreting Large Gene Expression Data within a Precision Medicine Context for Metabolic Disease Atherosclerosis. PMID:31032818
Long-read based assembly and synteny analysis of a reference Drosophila subobscura genome reveals signatures of structural evolution driven by inversions recombination-suppression effects. PMID:30885123
PamulDB: a comprehensive genomic resource for the study of human- and animal-pathogenic Pasteurella multocida. PMID:30799499
One tool to find them all: a case of data integration and querying in a distributed LIMS platform. PMID:30698777
OGER++: hybrid multi-type entity recognition. PMID:30666476
Harnessing formal concepts of biological mechanism to analyze human disease. PMID:30586388
GLUE: a flexible software system for virus sequence data. PMID:30563445
Transcriptomic and genomic profiling of early-stage ovarian carcinomas associated with histotype and overall survival. PMID:30416686
The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources. PMID:30407545
Genetic Analysis of 400 Patients Refines Understanding and Implicates a New Gene in Atypical Hemolytic Uremic Syndrome. PMID:30377230
LNCipedia 5: towards a reference set of human long non-coding RNAs. PMID:30371849
Rare truncating variants in the sarcomeric protein titin associate with familial and early-onset atrial fibrillation. PMID:30333491
ProxECAT: Proxy External Controls Association Test. A new case-control gene region association test using allele frequencies from public controls. PMID:30325923
Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community-driven standards. PMID:30311370
Sequence Alterations of Cortical Genes Linked to Individual Connectivity of the Human Brain. PMID:30307489
Exhaustive non-synonymous variants functionality prediction enables high resolution characterization of the neurofibromin architecture. PMID:30274822
Exome sequencing study in patients with multiple sclerosis reveals variants associated with disease course. PMID:30217166
MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources. PMID:30212909
Landscape of copy number variations in Bos taurus: individual - and inter-breed variability. PMID:29843606
QTLTableMiner++: semantic mining of QTL tables in scientific articles. PMID:29801439
PomBase: The Scientific Resource for Fission Yeast. PMID:29761456
Genome Annotation Generator: a simple tool for generating and correcting WGS annotation tables for NCBI submission. PMID:29635297
From SNPs to pathways: Biological interpretation of type 2 diabetes (T2DM) genome wide association study (GWAS) results. PMID:29617380
A statistical approach to identify, monitor, and manage incomplete curated data sets. PMID:29609549
Textpresso Central: a customizable platform for searching, text mining, viewing, and curating biomedical literature. PMID:29523070
The VAAST Variant Prioritizer (VVP): ultrafast, easy to use whole genome variant prioritization tool. PMID:29463208
Erythrogene: a database for in-depth analysis of the extensive variation in 36 blood group systems in the 1000 Genomes Project. PMID:29296939
RNAStructuromeDB: A genome-wide database for RNA structural inference. PMID:29222504
SAPP: functional genome annotation and analysis through a semantic framework using FAIR principles. PMID:29186322
The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes. PMID:29169408
Consensus coding sequence (CCDS) database: a standardized set of human and mouse protein-coding regions supported by expert curation. PMID:29126148
Entity recognition in the biomedical domain using a hybrid approach. PMID:29122011
Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families. PMID:29112718
First-generation annotations for the fathead minnow (Pimephales promelas) genome. PMID:28853170
Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological Knowledgebase for the Laboratory Mouse. PMID:28838066
Coreference annotation and resolution in the Colorado Richly Annotated Full Text (CRAFT) corpus of biomedical journal articles. PMID:28818042
Syntool: A Novel Region-Based Intolerance Score to Single Nucleotide Substitution for Synonymous Mutations Predictions Based on 123,136 Individuals. PMID:28812016
Settling the score: variant prioritization and Mendelian disease. PMID:28804138
COGNATE: comparative gene annotation characterizer. PMID:28716078
Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance. PMID:28694792
Rare Variant Analysis of Human and Rodent Obesity Genes in Individuals with Severe Childhood Obesity. PMID:28663568
Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes. PMID:28609292
CHOmine: an integrated data warehouse for CHO systems biology and modeling. PMID:28605771
Genetic diagnosis of Mendelian disorders via RNA sequencing. PMID:28604674
Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis. PMID:28585551
Whole genome sequencing and imputation in isolated populations identify genetic associations with medically-relevant complex traits. PMID:28548082
The genome sequence of sweet cherry (Prunus avium) for use in genomics-assisted breeding. PMID:28541388
BioMake: a GNU make-compatible utility for declarative workflow management. PMID:28486579
A geographically-diverse collection of 418 human gut microbiome pathway genome databases. PMID:28398290
Prioritisation of structural variant calls in cancer genomes. PMID:28392986
Combining clinical and genomics queries using i2b2 - Three methods. PMID:28388645
SilkPathDB: a comprehensive resource for the study of silkworm pathogens. PMID:28365723
The druggable genome and support for target identification and validation in drug development. PMID:28356508
A rare IL33 loss-of-function mutation reduces blood eosinophil counts and protects from asthma. PMID:28273074
ATGC transcriptomics: a web-based application to integrate, explore and analyze de novo transcriptomic data. PMID:28222698
Opportunities and challenges of whole-genome and -exome sequencing. PMID:28193154
CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer. PMID:28138153
A variant by any name: quantifying annotation discordance across tools and clinical databases. PMID:28122645
Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.). PMID:28120935
The development of non-coding RNA ontology. PMID:27990175
DNA Data Bank of Japan. PMID:27924010
The Zebrafish Model Organism Database: new support for human disease models, mutation details, gene expression phenotypes and searching. PMID:27899582
Somatic cancer variant curation and harmonization through consensus minimum variant level data. PMID:27814769
Clonal evolution of chemotherapy-resistant urothelial carcinoma. PMID:27749842
A scientist's guide for submitting data to ZFIN. PMID:27443940
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. PMID:27296299
The Proteasix Ontology. PMID:27259807
The Orthology Ontology: development and applications. PMID:27259657
OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data. PMID:27175225
The Non-Coding RNA Ontology (NCRO): a comprehensive resource for the unification of non-coding RNA biology. PMID:27152146
g:Profiler-a web server for functional interpretation of gene lists (2016 update). PMID:27098042
Extending gene ontology in the context of extracellular RNA and vesicle communication. PMID:27076901
The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database. PMID:27009807
Chado use case: storing genomic, genetic and breeding data of Rosaceae and Gossypium crops in Chado. PMID:26989146
Weighting sequence variants based on their annotation increases power of whole-genome association studies. PMID:26854916
A review of the new HGNC gene family resource. PMID:26842383
Consolidating and Exploring Antibiotic Resistance Gene Data Resources. PMID:26818666
Consent Codes: Upholding Standard Data Use Conditions. PMID:26796797
UCSC Data Integrator and Variant Annotation Integrator. PMID:26740527
Emerging semantics to link phenotype and environment. PMID:26713234
VAGrENT: Variation Annotation Generator. PMID:26678383
SBOL Visual: A Graphical Language for Genetic Designs. PMID:26633141
Annotation of rule-based models with formal semantics to enable creation, analysis, reuse and visualization. PMID:26559508
Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment. PMID:26494363
miRNA Nomenclature: A View Incorporating Genetic Origins, Biosynthetic Pathways, and Sequence Variants. PMID:26453491
PDON: Parkinson's disease ontology for representation and modeling of the Parkinson's disease knowledge domain. PMID:26395080
Genomic variant annotation and prioritization with ANNOVAR and wANNOVAR. PMID:26379229
Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies. PMID:26320941
Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping. PMID:26319908
CSN and CAVA: variant annotation tools for rapid, robust next-generation sequencing analysis in the clinical setting. PMID:26315209
Use of semantic workflows to enhance transparency and reproducibility in clinical omics. PMID:26289940
The Matchmaker Exchange API: automating patient matching through the exchange of structured phenotypic and genotypic profiles. PMID:26255989
Improving the Sequence Ontology terminology for genomic variant annotation. PMID:26229585
Facilitating collaboration in rare genetic disorders through effective matchmaking in DECIPHER. PMID:26220709
A Methodology for the Development of RESTful Semantic Web Services for Gene Expression Analysis. PMID:26207740
toxoMine: an integrated omics data warehouse for Toxoplasma gondii systems biology research. PMID:26130662
The Mouse Genomes Project: a repository of inbred laboratory mouse strain genomes. PMID:26123534
Disease-associated variants in different categories of disease located in distinct regulatory elements. PMID:26110593
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders. PMID:26109356
Cross-organism analysis using InterMine. PMID:26097192
ZFIN, The zebrafish model organism database: Updates and new directions. PMID:26097180
Identification of genomic regions associated with female fertility in Danish Jersey using whole genome sequence data. PMID:26036962
GFVO: the Genomic Feature and Variation Ontology. PMID:26019997
Sequence variants from whole genome sequencing a large group of Icelanders. PMID:25977816
HIGH-PRECISION BIOLOGICAL EVENT EXTRACTION: EFFECTS OF SYSTEM AND OF DATA. PMID:25937701
GenoLIB: a database of biological parts derived from a library of common plasmid features. PMID:25925571
Construction of an ortholog database using the semantic web technology for integrative analysis of genomic data. PMID:25875762
The role of ontologies in biological and biomedical research: a functional perspective. PMID:25863278
Ontology application and use at the ENCODE DCC. PMID:25776021
Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative. PMID:25759811
TypOn: the microbial typing ontology. PMID:25584183
Computational approaches to interpreting genomic sequence variation. PMID:25473426
SNiPA: an interactive, genetic variant-centered annotation browser. PMID:25431330
Gene Ontology Consortium: going forward. PMID:25428369
Araport: the Arabidopsis information portal. PMID:25414324
PomBase 2015: updates to the fission yeast database. PMID:25361970
Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi. PMID:25244985
Organizing knowledge to enable personalization of medicine in cancer. PMID:25222080
Guidelines for the nomenclature of genetic elements in tunicate genomes. PMID:25220678
Preserving sequence annotations across reference sequences. PMID:25093075
OMIT: dynamic, semi-automated ontology development for the microRNA domain. PMID:25025130
Choice of transcripts and software has a large effect on variant annotation. PMID:24944579
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology. PMID:24911500
Using semantic web technologies to annotate and align microarray designs. PMID:24904201
Digital expression profiling of the compartmentalized translatome of Purkinje neurons. PMID:24904046
Using VAAST to Identify Disease-Associated Variants in Next-Generation Sequencing Data. PMID:24763993
BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs. PMID:24627804
The Zebrafish GenomeWiki: a crowdsourcing approach to connect the long tail for zebrafish gene annotation. PMID:24578356
Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters. PMID:24571547
Prioritizing disease-linked variants, genes, and pathways with an interactive whole-genome analysis pipeline. PMID:24478219
Semantic integration of gene expression analysis tools and data sources using software connectors. PMID:24341380
RefSeq microbial genomes database: new representation and annotation strategy. PMID:24316578
Ensembl 2014. PMID:24316576
CyanoBase and RhizoBase: databases of manually curated annotations for cyanobacterial and rhizobial genomes. PMID:24275496
Representing annotation compositionality and provenance for the Semantic Web. PMID:24268021
Gramene 2013: comparative plant genomics resources. PMID:24217918
CottonGen: a genomics, genetics and breeding database for cotton research. PMID:24203703
The Database of Genomic Variants: a curated collection of structural variation in the human genome. PMID:24174537
Tripal v1.1: a standards-based toolkit for construction of online genetic and genomic databases. PMID:24163125
Variation Ontology for annotation of variation effects and mechanisms. PMID:24162187
DECIPHER: database for the interpretation of phenotype-linked plausibly pathogenic sequence and copy-number variation. PMID:24150940
Genomic analysis of natural selection and phenotypic variation in high-altitude mongolians. PMID:23874230
Silicon era of carbon-based life: application of genomics and bioinformatics in crop stress research. PMID:23759993
The Growing Importance of CNVs: New Insights for Detection and Clinical Interpretation. PMID:23750167
FYPO: the fission yeast phenotype ontology. PMID:23658422
InterMOD: integrated data and tools for the unification of model organism research. PMID:23652793
The comprehensive antibiotic resistance database. PMID:23650175
Clever generation of rich SPARQL queries from annotated relational schema: application to Semantic Web Service creation for biological databases. PMID:23586394
Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation. PMID:23552365
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats. PMID:23479348
Applying semantic web technologies for phenome-wide scan using an electronic health record linked Biobank. PMID:23244446
Ensembl 2013. PMID:23203987
BSRD: a repository for bacterial small regulatory RNA. PMID:23203879
DbVar and DGVa: public archives for genomic structural variation. PMID:23193291
Genenames.org: the HGNC resources in 2013. PMID:23161694
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR. PMID:23160413
Opportunities for text mining in the FlyBase genetic literature curation workflow. PMID:23160412
Linking genome annotation projects with genetic disorders using ontologies. PMID:23149630
LTRsift: a graphical user interface for semi-automatic classification and postprocessing of de novo detected LTR retrotransposons. PMID:23131050
CooVar: co-occurring variant analyzer. PMID:23116482
A UML profile for the OBO relation ontology. PMID:23095840
Ontology-based cross-species integration and analysis of Saccharomyces cerevisiae phenotypes. PMID:23046642
VarioML framework for comprehensive variation data representation and exchange. PMID:23031277
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data. PMID:23023984
A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools. PMID:22901054
Concept annotation in the CRAFT corpus. PMID:22776079
VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing. PMID:22693211
IMGT-ONTOLOGY 2012. PMID:22654892
Computational tools for metabolic engineering. PMID:22629572
The Ontology for Parasite Lifecycle (OPL): towards a consistent vocabulary of lifecycle stages in parasitic organisms. PMID:22621763
Semantic integration of physiology phenotypes with an application to the Cellular Phenotype Ontology. PMID:22539675
GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity Database. PMID:22536971
A beginner's guide to eukaryotic genome annotation. PMID:22510764
Considerations for creating and annotating the budding yeast Genome Map at SGD: a progress report. PMID:22434826
Improving integrative searching of systems chemical biology data using semantic annotation. PMID:22401035
A semantic web framework to integrate cancer omics data with biological knowledge. PMID:22373303
A semantic problem solving environment for integrative parasite research: identification of intervention targets for Trypanosoma cruzi. PMID:22272365
ProKinO: an ontology for integrative analysis of protein kinases in cancer. PMID:22194913
MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects. PMID:22192575
Ontology design patterns to disambiguate relations between genes and gene products in GENIA. PMID:22166341
A unified framework for managing provenance information in translational research. PMID:22126369
INOH: ontology-based highly structured database of signal transduction pathways. PMID:22120663
GONUTS: the Gene Ontology Normal Usage Tracking System. PMID:22110029
Ensembl 2012. PMID:22086963
modMine: flexible access to modENCODE data. PMID:22080565
Exact score distribution computation for ontological similarity searches. PMID:22078312
The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse. PMID:22075990
PomBase: a comprehensive online resource for fission yeast. PMID:22039153
The BioLexicon: a large-scale terminological resource for biomedical text mining. PMID:21992002
The chemical information ontology: provenance and disambiguation for chemical data on the biological semantic web. PMID:21991315
The representation of protein complexes in the Protein Ontology (PRO). PMID:21929785
Data extraction, transformation, and dissemination through ZFIN. PMID:21924170
The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details. PMID:21856757
Meeting report of the RNA Ontology Consortium January 8-9, 2011. PMID:21677862
An open annotation ontology for science on web 3.0. PMID:21624159
PLIO: an ontology for formal description of protein-ligand interactions. PMID:21546398
TparvaDB: a database to support Theileria parva vaccine development. PMID:21546359
Standard biological parts knowledgebase. PMID:21390321
easyDAS: automatic creation of DAS servers. PMID:21244646
Bovine Genome Database: supporting community annotation and analysis of the Bos taurus genome. PMID:21092105
A tutorial on protein ontology resources for proteomic studies. PMID:21082429
Rfam: Wikipedia, clans and the "decimal" release. PMID:21062808
The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics. PMID:21051359
ZFIN: enhancements and updates to the Zebrafish Model Organism Database. PMID:21036866
ParameciumDB in 2011: new tools and new data for functional and comparative genomics of the model ciliate Paramecium tetraurelia. PMID:20952411
Next generation models for storage and representation of microbial biological annotation. PMID:20946598
Exploring zebrafish genomic, functional and phenotypic data using ZFIN. PMID:20836073
The BioPAX community standard for pathway data sharing. PMID:20829833
BioXSD: the common data-exchange format for everyday bioinformatics web services. PMID:20823319
Relations as patterns: bridging the gap between OBO and OWL. PMID:20807438
A standard variation file format for human genome sequences. PMID:20796305
The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program. PMID:20647237
Global expression studies in baker's yeast reveal target genes for the improvement of industrially-relevant traits: the cases of CAF16 and ORC2. PMID:20626860
Applying the functional abnormality ontology pattern to anatomical functions. PMID:20618982
Using semantic web rules to reason on an ontology of pseudogenes. PMID:20529940
SOBA: sequence ontology bioinformatics analysis. PMID:20494974
From IMGT-ONTOLOGY to IMGT/LIGMotif: the IMGT standardized approach for immunoglobulin and T cell receptor gene identification and description in large genomic sequences. PMID:20433708
Ergatis: a web interface and scalable software system for bioinformatics workflows. PMID:20413634
Evolution of the Sequence Ontology terms and relationships. PMID:20226267
Visualization of multiple alignments, phylogenies and gene family evolution. PMID:20195253
GenoCAD for iGEM: a grammatical approach to the design of standard-compliant constructs. PMID:20167639
Cross-product extensions of the Gene Ontology. PMID:20152934
The ontology of biological sequences. PMID:19919720
Involvement of vacuolar sequestration and active transport in tolerance of Saccharomyces cerevisiae to hop iso-alpha-acids. PMID:19915041
phiSITE: database of gene regulation in bacteriophages. PMID:19900969
Construction of an annotated corpus to support biomedical information extraction. PMID:19852798
Modeling structure-function relationships in synthetic DNA sequences using attribute grammars. PMID:19816554
Genomics. Genome project standards in a new era of sequencing. PMID:19815760
Initial implementation of a comparative data analysis ontology. PMID:19812726
Fine-grained annotation and classification of de novo predicted LTR retrotransposons. PMID:19786494
The RNA structure alignment ontology. PMID:19622678
Apollo: a community resource for genome annotation editing. PMID:19439563
TGF-beta signaling proteins and the Protein Ontology. PMID:19426460
Modeling genomic data with type attributes, balancing stability and maintainability. PMID:19327130
Quantitative measures for the management and comparison of annotated genomes. PMID:19236712
Strategies for reliable exploitation of evolutionary concepts in high throughput biology. PMID:19204813
Towards a semi-automatic functional annotation tool based on decision-tree techniques. PMID:19091050
Genome and proteome annotation: organization, interpretation and integration. PMID:19019817
Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes. PMID:19015150
The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience. PMID:18975148
The Protein Feature Ontology: a tool for the unification of protein feature annotations. PMID:18936051
Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. PMID:18845581
Integrating biological data--the Distributed Annotation System. PMID:18673527
Web GIS in practice VI: a demo playlist of geo-mashups for public health neogeographers. PMID:18638385
Calling on a million minds for community annotation in WikiProteins. PMID:18507872
IMGT, the International ImMunoGeneTics Information System for Immunoinformatics : methods for querying IMGT databases, tools, and web resources in the context of immunoinformatics. PMID:18463990
Terminologies for text-mining; an experiment in the lipoprotein metabolism domain. PMID:18460175
GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations. PMID:18315859
Bioinformatics and cancer research: building bridges for translational research. PMID:18258507
Framework for a protein ontology. PMID:18047702
REDfly 2.0: an integrated database of cis-regulatory modules and transcription factor binding sites in Drosophila. PMID:18039705
MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes. PMID:18025269
The Gene Ontology project in 2008. PMID:17984083
Simplified ontologies allowing comparison of developmental mammalian gene expression. PMID:17961239
Acclimation of Saccharomyces cerevisiae to low temperature: a chemostat-based transcriptome analysis. PMID:17928405
SmedGD: the Schmidtea mediterranea genome database. PMID:17881371
FlyMine: an integrated database for Drosophila and Anopheles genomics. PMID:17615057
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL. PMID:17311682
Curation of viral genomes: challenges, applications and the way forward. PMID:17254296
DiscoverySpace: an interactive data analysis application. PMID:17210078
ParameciumDB: a community resource that integrates the Paramecium tetraurelia genome sequence with genetic data. PMID:17142227
FlyBase: genomes by the dozen. PMID:17099233
When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation. PMID:16969341
Bio-ontologies: current trends and future directions. PMID:16899495
Positive selection, relaxation, and acceleration in the evolution of the human and chimp genome. PMID:16683019
MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation. PMID:16597336
Large-scale trends in the evolution of gene structures within 11 animal genomes. PMID:16518452
The RNA Ontology Consortium: an open invitation to the RNA community. PMID:16484377
FlyBase: anatomical data, images and queries. PMID:16381917
Genolevures complete genomes provide data and tools for comparative genomics of hemiascomycetous yeasts. PMID:16381905
The Gene Ontology (GO) project in 2006. PMID:16381878
MAO: a Multiple Alignment Ontology for nucleic acid and protein sequences. PMID:16043635 -
A standard variation file format for human genome sequences
PubMed citations: 50.
50 articles citing: A standard variation file format for human genome sequences
agReg-SNPdb-Plants: A Database of Regulatory SNPs for Agricultural Plant Species. PMID:35625412
Analysis of splice variants of the human protein disulfide isomerase (P4HB) gene. PMID:33148170
Organizing genome engineering for the gigabase scale. PMID:32019919
Bioinformatic Workflows for Generating Complete Plastid Genome Sequences-An Example from Cabomba (Cabombaceae) in the Context of the Phylogenomic Analysis of the Water-Lily Clade. PMID:29933597
Genome Annotation Generator: a simple tool for generating and correcting WGS annotation tables for NCBI submission. PMID:29635297
The VAAST Variant Prioritizer (VVP): ultrafast, easy to use whole genome variant prioritization tool. PMID:29463208
A burden of rare variants in BMPR2 and KCNK3 contributes to a risk of familial pulmonary arterial hypertension. PMID:28388887
Combining clinical and genomics queries using i2b2 - Three methods. PMID:28388645
Principles and Recommendations for Standardizing the Use of the Next-Generation Sequencing Variant File in Clinical Settings. PMID:28315672
Targeted Re-Sequencing Approach of Candidate Genes Implicates Rare Potentially Functional Variants in Tourette Syndrome Etiology. PMID:27708560
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. PMID:27296299
PredictSNP2: A Unified Platform for Accurately Evaluating SNP Effects by Exploiting the Different Characteristics of Variants in Distinct Genomic Regions. PMID:27224906
Human genetic variation database, a reference database of genetic variations in the Japanese population. PMID:26911352
Whole exome sequencing identifies novel candidate genes that modify chronic obstructive pulmonary disease susceptibility. PMID:26744305
BigQ: a NoSQL based framework to handle genomic variants in i2b2. PMID:26714792
Improving the Sequence Ontology terminology for genomic variant annotation. PMID:26229585
Good laboratory practice for clinical next-generation sequencing informatics pipelines. PMID:26154004
GFVO: the Genomic Feature and Variation Ontology. PMID:26019997
Clinical decision support for whole genome sequence information leveraging a service-oriented architecture: a prototype. PMID:25954430
A proposed clinical decision support architecture capable of supporting whole genome sequence information. PMID:25411644
EHR Big Data Deep Phenotyping. Contribution of the IMIA Genomic Medicine Working Group. PMID:25123744
The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation. PMID:25068035
A unified test of linkage analysis and rare-variant association for analysis of pedigree sequence data. PMID:24837662
Reducing false-positive incidental findings with ensemble genotyping and logistic regression based variant filtering methods. PMID:24829188
The personal genome browser: visualizing functions of genetic variants. PMID:24799434
Using VAAST to Identify Disease-Associated Variants in Next-Generation Sequencing Data. PMID:24763993
Accurate and robust prediction of genetic relationship from whole-genome sequences. PMID:24586241
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. PMID:24495517
Prioritizing disease-linked variants, genes, and pathways with an interactive whole-genome analysis pipeline. PMID:24478219
A primer for disease gene prioritization using next-generation sequencing data. PMID:24465230
Integrating precision medicine in the study and clinical treatment of a severely mentally ill person. PMID:24109560
Towards precision medicine: advances in computational approaches for the analysis of human variants. PMID:23962656
Clinical analysis of genome next-generation sequencing data using the Omicia platform. PMID:23895124
Genotype List String: a grammar for describing HLA and KIR genotyping results in a text string. PMID:23849068
VAAST 2.0: improved variant classification and disease-gene identification using a conservation-controlled amino acid substitution matrix. PMID:23836555
Pipit: visualizing functional impacts of structural variations. PMID:23803468
Genetic data and electronic health records: a discussion of ethical, logistical and technological considerations. PMID:23771953
DbVar and DGVa: public archives for genomic structural variation. PMID:23193291
CooVar: co-occurring variant analyzer. PMID:23116482
Gene Fusion Markup Language: a prototype for exchanging gene fusion data. PMID:23072312
gSearch: a fast and flexible general search tool for whole-genome sequencing. PMID:22730434
Technical desiderata for the integration of genomic data into Electronic Health Records. PMID:22223081
Identifying elemental genomic track types and representing them uniformly. PMID:22208806
Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes. PMID:22182502
The UCSC Genome Browser. PMID:21975940
Kaviar: an accessible system for testing SNV novelty. PMID:21965822
A probabilistic disease-gene finder for personal genomes. PMID:21700766
Using VAAST to identify an X-linked disorder resulting in lethality in male infants due to N-terminal acetyltransferase deficiency. PMID:21700266
The variant call format and VCFtools. PMID:21653522
Global analysis of disease-related DNA sequence variation in 10 healthy individuals: implications for whole genome-based clinical diagnostics. PMID:21325948 -
Evolution of the Sequence Ontology terms and relationships
PubMed citations: 46.
46 articles citing: Evolution of the Sequence Ontology terms and relationships
Harmonizing model organism data in the Alliance of Genome Resources. PMID:35380658
CottonGen: The Community Database for Cotton Genomics, Genetics, and Breeding Research. PMID:34961276
The Human Disease Ontology 2022 update. PMID:34755882
GMO Genetic Elements Thesaurus (GMO-GET): a controlled vocabulary for the consensus designation of introduced or modified genetic elements in genetically modified organisms. PMID:33546585
The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems. PMID:33205138
Galaxy and Apollo as a biologist-friendly interface for high-quality cooperative phage genome annotation. PMID:33137082
TogoGenome/TogoStanza: modularized Semantic Web genome database. PMID:30624651
The Gene Ontology Resource: 20 years and still GOing strong. PMID:30395331
Genome Annotation Generator: a simple tool for generating and correcting WGS annotation tables for NCBI submission. PMID:29635297
ClinVar: improving access to variant interpretations and supporting evidence. PMID:29165669
Rare Variant Analysis of Human and Rodent Obesity Genes in Individuals with Severe Childhood Obesity. PMID:28663568
Identification of protein features encoded by alternative exons using Exon Ontology. PMID:28420690
Principles and Recommendations for Standardizing the Use of the Next-Generation Sequencing Variant File in Clinical Settings. PMID:28315672
ATGC transcriptomics: a web-based application to integrate, explore and analyze de novo transcriptomic data. PMID:28222698
Tutorial on Protein Ontology Resources. PMID:28150233
Open Targets: a platform for therapeutic target identification and validation. PMID:27899665
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species. PMID:27899636
Consent Codes: Upholding Standard Data Use Conditions. PMID:26796797
In Silico Functional Annotation of Genomic Variation. PMID:26724722
ClinVar: public archive of interpretations of clinically relevant variants. PMID:26582918
ANISEED 2015: a digital framework for the comparative developmental biology of ascidians. PMID:26420834
Use of semantic workflows to enhance transparency and reproducibility in clinical omics. PMID:26289940
A unified gene catalog for the laboratory mouse reference genome. PMID:26084703
GenoLIB: a database of biological parts derived from a library of common plasmid features. PMID:25925571
SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes. PMID:25309735
Preserving sequence annotations across reference sequences. PMID:25093075
The ontology of genetic susceptibility factors (OGSF) and its application in modeling genetic susceptibility to vaccine adverse events. PMID:24963371
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology. PMID:24911500
Thematic series on biomedical ontologies in JBMS: challenges and new directions. PMID:24602198
Protein Ontology: a controlled structured network of protein entities. PMID:24270789
ClinVar: public archive of relationships among sequence variation and human phenotype. PMID:24234437
CottonGen: a genomics, genetics and breeding database for cotton research. PMID:24203703
A guide to best practices for Gene Ontology (GO) manual annotation. PMID:23842463
Evaluation of research in biomedical ontologies. PMID:22962340
Computational tools for comparative phenomics: the role and promise of ontologies. PMID:22814867
Concept annotation in the CRAFT corpus. PMID:22776079
GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity Database. PMID:22536971
Semantically enabling pharmacogenomic data for the realization of personalized medicine. PMID:22256869
Interoperability between biomedical ontologies through relation expansion, upper-level ontologies and automatic reasoning. PMID:21789201
Ontological realism: A methodology for coordinated evolution of scientific ontologies. PMID:21637730
A common layer of interoperability for biomedical ontologies based on OWL EL. PMID:21343142
Ontologies for clinical and translational research: Introduction. PMID:21241822
The Protein Ontology: a structured representation of protein forms and complexes. PMID:20935045
Relations as patterns: bridging the gap between OBO and OWL. PMID:20807438
Cross-product extensions of the Gene Ontology. PMID:20152934
Calling International Rescue: knowledge lost in literature and data landslide! PMID:19929850
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deoxyribonucleic acid
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
genome
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
ribonucleic acid
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
sequence annotation
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
sequence feature
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
region
metasource: Fairsharing.org
version: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
deoxyribonucleic acid
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
ribonucleic acid
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
sequence annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
sequence feature
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
region
metasource: Fairsharing.orgversion: FAIRsharing.org: SO; Sequence Ontology; DOI: https://doi.org/10.25504/FAIRsharing.6bc7h9; Last edited: Feb. 4, 2020, 11 a.m.; Last accessed: Jan 03 2022 7:11 p.m.
dna gene genome rna sequence annotation sequence feature region
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