DDBJ/ENA/GenBank Feature Table
The GenBank, EMBL, and DDBJ nucleic acid sequence data banks have from their inception used tables of sites and features to describe the roles and locations of higher order sequence domains and elements within the genome of an organism. In February, 1986, GenBank and EMBL began a collaborative effort (joined by DDBJ in 1987) to devise a common feature table format and common standards for annotation practice.
Description
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The GenBank, EMBL, and DDBJ nucleic acid sequence data banks have from their inception used tables of sites and features to describe the roles and locations of higher order sequence domains and elements within the genome of an organism. In February, 1986, GenBank and EMBL began a collaborative effort (joined by DDBJ in 1987) to devise a common feature table format and common standards for annotation practice.
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Webpage:
http://www.insdc.org/documents/feature-tableWebpage
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Licence:
Name: EMBL-EBI Terms of UseLicence name
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Publications:
Publications
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The International Nucleotide Sequence Database Collaboration
PMID: 21106499
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Publications
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The International Nucleotide Sequence Database Collaboration
PMID: 21106499
metasource: Fairsharing.org
version: None
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The International Nucleotide Sequence Database Collaboration
PubMed citations: 34.
34 articles citing: The International Nucleotide Sequence Database Collaboration
Phylogenetic delimitation of Apiospora and Arthrinium. PMID:34124624
Ensembl 2021. PMID:33137190
Optimizing open data to support one health: best practices to ensure interoperability of genomic data from bacterial pathogens. PMID:33103064
Document or Lose It-On the Importance of Information Management for Genetic Resources Conservation in Genebanks. PMID:32824806
OMGene: mutual improvement of gene models through optimisation of evolutionary conservation. PMID:29703150
SCPortalen: human and mouse single-cell centric database. PMID:29045713
More than one fungus in the pepper pot: Integrative taxonomy unmasks hidden species within Myriostoma coliforme (Geastraceae, Basidiomycota). PMID:28591150
Discovery or Extinction of New Scleroderma Species in Amazonia? PMID:28002414
The Global Genome Biodiversity Network (GGBN) Data Standard specification. PMID:27694206
Optimizing sgRNA position markedly improves the efficiency of CRISPR/dCas9-mediated transcriptional repression. PMID:27353328
Global Genome Biodiversity Network: saving a blueprint of the Tree of Life - a botanical perspective. PMID:27328683
Novel bioinformatic developments for exome sequencing. PMID:27075447
The Corvids Literature Database--500 years of ornithological research from a crow's perspective. PMID:26868053
Every Site Counts: Submitting Transcription Factor-Binding Site Information through the CollecTF Portal. PMID:26013488
Astraeus: hidden dimensions. PMID:24563840
Prediction of monomer isomery in Florine: a workflow dedicated to nonribosomal peptide discovery. PMID:24465643
Molecular analyses confirm Brevicellicium in Trechisporales. PMID:23898409
DDBJ read annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing data. PMID:23657089
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. PMID:23193283
Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case. PMID:22970104
GENCODE: the reference human genome annotation for The ENCODE Project. PMID:22955987
The GENCODE pseudogene resource. PMID:22951037
BIND - an algorithm for loss-less compression of nucleotide sequence data. PMID:22922203
A ranking system for reference libraries of DNA barcodes: application to marine fish species from Portugal. PMID:22558244
GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity Database. PMID:22536971
PRIDE: quality control in a proteomics data repository. PMID:22434838
HmtDB, a genomic resource for mitochondrion-based human variability studies. PMID:22139932
BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata. PMID:22139929
The IntAct molecular interaction database in 2012. PMID:22121220
Major submissions tool developments at the European Nucleotide Archive. PMID:22080548
The International Nucleotide Sequence Database Collaboration. PMID:22080546
Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species. PMID:22067447
The 2011 Nucleic Acids Research Database Issue and the online Molecular Biology Database Collection. PMID:21177655
The sequence read archive. PMID:21062823
Tags:
Tags
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binding
metasource: Fairsharing.org
version: None
nucleic acid sequence
metasource: Fairsharing.org
version: None
sequence composition, complexity and repeats
metasource: Fairsharing.org
version: None
Tags
More detailed information about this field from each metasource.
binding
metasource: Fairsharing.orgversion: None
nucleic acid sequence
metasource: Fairsharing.orgversion: None
sequence composition, complexity and repeats
metasource: Fairsharing.orgversion: None
binding nucleic acid sequence sequence composition, complexity and repeats
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