PubMed

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PubMed

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

metasource: BiŌkeanós-Medsourcing
version: 0.0.1:2022-11-04T13:34:25.975929

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pubmed

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

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Other names: pubmed

PubMed® comprises more than 30 million citations for biomedical literature from MEDLINE, life science journals, and online books. Citations may include links to full text content from PubMed Central and publisher web sites.

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Licence:

Publications:

Publications

More detailed information about this field from each metasource. ×

Database resources of the National Center for Biotechnology Information
PMID: 19910364

metasource: BiŌkeanós-Medsourcing
version: 0.0.1:2022-11-04T13:34:25.975929

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• Database resources of the National Center for Biotechnology Information PubMed citations: 258.

  258 articles citing: Database resources of the National Center for Biotechnology Information

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  Sustained software development, not number of citations or journal choice, is indicative of accurate bioinformatic software. PMID:35172880

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  SPENCER: a comprehensive database for small peptides encoded by noncoding RNAs in cancer patients. PMID:34570216

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  ACO2 clinicobiological dataset with extensive phenotype ontology annotation. PMID:34354088

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  Chronic cerebral lipocalin 2 exposure elicits hippocampal neuronal dysfunction and cognitive impairment. PMID:34245812

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  Molecular Dynamic Simulations Suggest That Metabolite-Induced Post-Translational Modifications Alter the Behavior of the Fibrinogen Coiled-Coil Domain. PMID:34065002

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  Remodeling of the gut microbiome during Ramadan-associated intermittent fasting. PMID:33842951

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  Plant miRNAs Reduce Cancer Cell Proliferation by Targeting MALAT1 and NEAT1: A Beneficial Cross-Kingdom Interaction. PMID:33193626

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  Virus Isoelectric Point Estimation: Theories and Methods. PMID:33188001

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  An Improved hgcAB Primer Set and Direct High-Throughput Sequencing Expand Hg-Methylator Diversity in Nature. PMID:33123100

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  Keeping up with the genomes: efficient learning of our increasing knowledge of the tree of life. PMID:32957925

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  Overview of PAX gene family: analysis of human tissue-specific variant expression and involvement in human disease. PMID:32728807

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  Microbiome and Metagenome Analyses of a Closed Habitat during Human Occupation. PMID:32723791

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  Scalable phylogenetic profiling using MinHash uncovers likely eukaryotic sexual reproduction genes. PMID:32697802

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  BRret: Retrieval of Brain Research Related Literature. PMID:32477623

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  Codon Pairs are Phylogenetically Conserved: A comprehensive analysis of codon pairing conservation across the Tree of Life. PMID:32401752

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  The Controversial Role of Human Gut Lachnospiraceae. PMID:32326636

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  Draft genomes of two Atlantic bay scallop subspecies Argopecten irradians irradians and A. i. concentricus. PMID:32251283

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  The sex with the reduced sex chromosome dies earlier: a comparison across the tree of life. PMID:32126186

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  Impact of posttranslational modifications on atomistic structure of fibrinogen. PMID:31995579

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  Orchid conservation and research: An analysis of gaps and priorities for globally Red Listed species. PMID:31960279

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  Universal concept signature analysis: genome-wide quantification of new biological and pathological functions of genes and pathways. PMID:31631213

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  Immediate Effects of Ammonia Shock on Transcription and Composition of a Biogas Reactor Microbiome. PMID:31555248

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  Big Data and Artificial Intelligence Modeling for Drug Discovery. PMID:31518513

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  OPA1: 516 unique variants and 831 patients registered in an updated centralized Variome database. PMID:31500643

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  Tree shape-based approaches for the comparative study of cophylogeny. PMID:31312429

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  CAM: an alignment-free method to recover phylogenies using codon aversion motifs. PMID:31198636

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  GIDB: a knowledge database for the automated curation and multidimensional analysis of molecular signatures in gastrointestinal cancer. PMID:31089686

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  Advancing Computational Toxicology in the Big Data Era by Artificial Intelligence: Data-Driven and Mechanism-Driven Modeling for Chemical Toxicity. PMID:30907586

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  Succession and persistence of microbial communities and antimicrobial resistance genes associated with International Space Station environmental surfaces. PMID:30424821

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  Augmentation of crop productivity through interventions of omics technologies in India: challenges and opportunities. PMID:30370195

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  Draft genome of the Peruvian scallop Argopecten purpuratus. PMID:29617765

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  A divide-and-conquer algorithm for large-scale de novo transcriptome assembly through combining small assemblies from existing algorithms. PMID:29244008

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  RampDB: a web application and database for the exploration and prediction of receptor activity modifying protein interactions. PMID:29220456

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  Microbial communities in the reef water at Kham Island, lower Gulf of Thailand. PMID:28828243

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  Discovery of Variants Underlying Host Susceptibility to Virus Infection Using Whole-Exome Sequencing. PMID:28808973

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  Identification of RNA biomarkers for chemical safety screening in mouse embryonic stem cells using RNA deep sequencing analysis. PMID:28750099

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  A scalable and memory-efficient algorithm for de novo transcriptome assembly of non-model organisms. PMID:28589866

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  Impact of genetic variation on three dimensional structure and function of proteins. PMID:28296894

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  Regulatory and activated effector T cells in chronic hepatitis C virus: Relation to autoimmunity. PMID:27843539

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  Abundance and Biogeography of Picoprasinophyte Ecotypes and Other Phytoplankton in the Eastern North Pacific Ocean. PMID:26729718

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  Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data. PMID:26576690

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  RFX transcription factors are essential for hearing in mice. PMID:26469318

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  Genetic Polymorphisms in Inflammasome-Dependent Innate Immunity among Pediatric Patients with Severe Renal Parenchymal Infections. PMID:26444566

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  Micropublications: a semantic model for claims, evidence, arguments and annotations in biomedical communications. PMID:26261718

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  Evolution of selenophosphate synthetases: emergence and relocation of function through independent duplications and recurrent subfunctionalization. PMID:26194102

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  The microRNA-183 cluster: the family that plays together stays together. PMID:26170234

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  Natural variability of minimotifs in 1092 people indicates that minimotifs are targets of evolution. PMID:26068475

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  Preferential Amplification of Pathogenic Sequences. PMID:26067233

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  CMRegNet-An interspecies reference database for corynebacterial and mycobacterial regulatory networks. PMID:26062809

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  Current Methods for Automated Filtering of Multiple Sequence Alignments Frequently Worsen Single-Gene Phylogenetic Inference. PMID:26031838

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  Transcriptional activity of the giant barrel sponge, Xestospongia muta Holobiont: molecular evidence for metabolic interchange. PMID:25972851

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  Identification of Novel Crk-associated Substrate (p130Cas) Variants with Functionally Distinct Focal Adhesion Kinase Binding Activities. PMID:25805500

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  High-Performance Integrated Virtual Environment (HIVE) Tools and Applications for Big Data Analysis. PMID:25271953

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  Big data in chemical toxicity research: the use of high-throughput screening assays to identify potential toxicants. PMID:25195622

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  Inhibition of the SR protein-phosphorylating CLK kinases of Plasmodium falciparum impairs blood stage replication and malaria transmission. PMID:25188378

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  STATdb: a specialised resource for the STATome. PMID:25157689

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  A memory-efficient algorithm to obtain splicing graphs and de novo expression estimates from de Bruijn graphs of RNA-Seq data. PMID:25082000

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  Robustness and evolvability of the human signaling network. PMID:25077791

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  The common marmoset genome provides insight into primate biology and evolution. PMID:25038751

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  Structural and functional diversity of free-living microorganisms in reef surface, Kra island, Thailand. PMID:25037613

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  Phylogenetic analysis and molecular signatures defining a monophyletic clade of heterocystous cyanobacteria and identifying its closest relatives. PMID:24917519

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  The HIVToolbox 2 web system integrates sequence, structure, function and mutation analysis. PMID:24886930

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  Reassessing domain architecture evolution of metazoan proteins: major impact of gene prediction errors. PMID:24710207

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  An Examination of KCNE1 Mutations and Common Variants in Chronic Tinnitus. PMID:24710009

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  Microbial ecology of Thailand tsunami and non-tsunami affected terrestrials. PMID:24710002

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  Hen uterine gene expression profiling during eggshell formation reveals putative proteins involved in the supply of minerals or in the shell mineralization process. PMID:24649854

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  A phylogenomic view of ecological specialization in the Lachnospiraceae, a family of digestive tract-associated bacteria. PMID:24625961

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  tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria. PMID:24586126

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  The phylogenetic distribution and evolution of enzymes within the thymidine kinase 2-like gene family in metazoa. PMID:24500774

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  17β-estradiol upregulates GREB1 and accelerates ovarian tumor progression in vivo. PMID:24469735

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  PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations. PMID:24453961

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  Diversity and history of the long-chain acyl-CoA synthetase (Acsl) gene family in vertebrates. PMID:24330521

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  Knowledge and theme discovery across very large biological data sets using distributed queries: a prototype combining unstructured and structured data. PMID:24312478

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  Genome-wide identification and expression analysis of the mitogen-activated protein kinase gene family from banana suggest involvement of specific members in different stages of fruit ripening. PMID:24275941

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  Transcriptome deep-sequencing and clustering of expressed isoforms from Favia corals. PMID:23937070

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  Crystallographic analysis of the reaction cycle of 2',3'-cyclic nucleotide 3'-phosphodiesterase, a unique member of the 2H phosphoesterase family. PMID:23831225

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  Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum. PMID:23805903

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  Prevotella jejuni sp. nov., isolated from the small intestine of a child with coeliac disease. PMID:23793857

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  Genetic polymorphisms in Toll-like receptors among pediatric patients with renal parenchymal infections of different clinical severities. PMID:23484049

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  Structure-based comparative analysis and prediction of N-linked glycosylation sites in evolutionarily distant eukaryotes. PMID:23459159

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  Inhibition of the Pim1 oncogene results in diminished visual function. PMID:23300608

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  Chapter 12: Human microbiome analysis. PMID:23300406

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  Metagenomic profiles of free-living archaea, bacteria and small eukaryotes in coastal areas of Sichang island, Thailand. PMID:23282134

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  Semantically enabling a genome-wide association study database. PMID:23244533

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  Mutual information and variants for protein domain-domain contact prediction. PMID:23244412

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  WholeCellKB: model organism databases for comprehensive whole-cell models. PMID:23175606

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  Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability. PMID:23064114

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  Metagenomic analysis reveals a functional signature for biomass degradation by cecal microbiota in the leaf-eating flying squirrel (Petaurista alborufus lena). PMID:22963241

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  Diverse correlation patterns between microRNAs and their targets during tomato fruit development indicates different modes of microRNA actions. PMID:22922939

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  Network medicine: linking disorders. PMID:22825316

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  Conotoxins that confer therapeutic possibilities. PMID:22822370

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  IUPHAR-DB: an open-access, expert-curated resource for receptor and ion channel research. PMID:22778867

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  Semantically linking molecular entities in literature through entity relationships. PMID:22759460

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  Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology, and Indirect Associations. PMID:22719757

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  Biomine: predicting links between biological entities using network models of heterogeneous databases. PMID:22672646

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  Mutations and binding sites of human transcription factors. PMID:22670148

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  Three ontologies to define phenotype measurement data. PMID:22654893

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  Semantic text mining support for lignocellulose research. PMID:22595090

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  Bioinformatics opportunities for identification and study of medicinal plants. PMID:22589384

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  Proteome-wide analysis of single-nucleotide variations in the N-glycosylation sequon of human genes. PMID:22586465

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  Biochemical characterization of a novel haloalkane dehalogenase from a cold-adapted bacterium. PMID:22582053

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  Evolutionary conservation and network structure characterize genes of phenotypic relevance for mitosis in human. PMID:22577488

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  Computational analysis of cysteine and methionine metabolism and its regulation in dairy starter and related bacteria. PMID:22522891

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  Identification and characterization of novel mutations in the human gene encoding the catalytic subunit Calpha of protein kinase A (PKA). PMID:22514673

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  Context-specific protein network miner--an online system for exploring context-specific protein interaction networks from the literature. PMID:22493694

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  Fungal endophytic communities in grapevines (Vitis vinifera L.) respond to crop management. PMID:22492448

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  Protein interaction data curation: the International Molecular Exchange (IMEx) consortium. PMID:22453911

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  Genome-wide determination of RNA stability reveals hundreds of short-lived noncoding transcripts in mammals. PMID:22369889

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  Identification of gene-oriented exon orthology between human and mouse. PMID:22369432

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  Challenges in whole exome sequencing: an example from hereditary deafness. PMID:22363784

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  Characterization of the viral microbiome in patients with severe lower respiratory tract infections, using metagenomic sequencing. PMID:22355331

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  Genome sequencing and analysis of the Tasmanian devil and its transmissible cancer. PMID:22341448

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  Structural and functional characterization of H2 haplotype MAPT promoter: unique neurospecific domains and a hypoxia-inducible element would enhance rationally targeted tauopathy research for Alzheimer's disease. PMID:22310385

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  Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence. PMID:22292095

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  Partitioning the genetic diversity of a virus family: approach and evaluation through a case study of picornaviruses. PMID:22278230

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  Lachnoanaerobaculum gen. nov., a new genus in the Lachnospiraceae: characterization of Lachnoanaerobaculum umeaense gen. nov., sp. nov., isolated from the human small intestine, and Lachnoanaerobaculum orale sp. nov., isolated from saliva, and reclassification of Eubacterium saburreum (Prevot 1966) Holdeman and Moore 1970 as Lachnoanaerobaculum saburreum comb. nov. PMID:22228654

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  Towards Structuring Unstructured GenBank Metadata for Enhancing Comparative Biological Studies. PMID:22211174

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  The Y-segment of novel cold dehydrin genes is conserved and codons in the PR-10 genes are under positive selection in Oxytropis (Fabaceae) from contrasting climates. PMID:22183143

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  Update of the human secretoglobin (SCGB) gene superfamily and an example of 'evolutionary bloom' of androgen-binding protein genes within the mouse Scgb gene superfamily. PMID:22155607

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  Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequences. PMID:22146221

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  The Comprehensive Phytopathogen Genomics Resource: a web-based resource for data-mining plant pathogen genomes. PMID:22120664

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  NovelSNPer: A Fast Tool for the Identification and Characterization of Novel SNPs and InDels. PMID:22110502

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  Comparative genomics study of polyhydroxyalkanoates (PHA) and ectoine relevant genes from Halomonas sp. TD01 revealed extensive horizontal gene transfer events and co-evolutionary relationships. PMID:22040376

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  FilmArray, an automated nested multiplex PCR system for multi-pathogen detection: development and application to respiratory tract infection. PMID:22039434

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  ProGlycProt: a repository of experimentally characterized prokaryotic glycoproteins. PMID:22039152

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  ALFRED: an allele frequency resource for research and teaching. PMID:22039151

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  Towards Viral Genome Annotation Standards, Report from the 2010 NCBI Annotation Workshop. PMID:21994619

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  Cell type-specific transcriptome analysis reveals a major role for Zeb1 and miR-200b in mouse inner ear morphogenesis. PMID:21980309

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  Persistence and availability of Web services in computational biology. PMID:21966383

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  Reviewing ligand-based rational drug design: the search for an ATP synthase inhibitor. PMID:21954360

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  Visualization and exploration of conserved regulatory modules using ReXSpecies 2. PMID:21942985

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  A novel candidate cis-regulatory motif pair in the promoters of germline and oogenesis genes in C. elegans. PMID:21930893

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  Neisseria Base: a comparative genomics database for Neisseria meningitidis. PMID:21930505

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  The functional spectrum of low-frequency coding variation. PMID:21917140

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  A kinesin-1 binding motif in vaccinia virus that is widespread throughout the human genome. PMID:21915095

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  TheViral MetaGenome Annotation Pipeline(VMGAP):an automated tool for the functional annotation of viral Metagenomic shotgun sequencing data. PMID:21886867

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  Increased levels of noisy splicing in cancers, but not for oncogene-derived transcripts. PMID:21862452

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  Evolution of the Max and Mlx networks in animals. PMID:21859806

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  Knowledge engineering tools for reasoning with scientific observations and interpretations: a neural connectivity use case. PMID:21859449

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  Development of a classification scheme for disease-related enzyme information. PMID:21827651

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  BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons. PMID:21824423

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  Lung gene expression in a rhesus allergic asthma model correlates with physiologic parameters of disease and exhibits common and distinct pathways with human asthma and a mouse asthma model. PMID:21819959

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  Comparative analyses imply that the enigmatic Sigma factor 54 is a central controller of the bacterial exterior. PMID:21806785

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  Dynamics of nuclear matrix proteome during embryonic development in Drosophila melanogaster. PMID:21799256

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  IsoformEx: isoform level gene expression estimation using weighted non-negative least squares from mRNA-Seq data. PMID:21794104

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  PubChem3D: Biologically relevant 3-D similarity. PMID:21781288

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  PubChem3D: Shape compatibility filtering using molecular shape quadrupoles. PMID:21774809

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  Intuitive visualization and analysis of multi-omics data and application to Escherichia coli carbon metabolism. PMID:21731702

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  The functional cancer map: a systems-level synopsis of genetic deregulation in cancer. PMID:21718500

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  Update on the aldehyde dehydrogenase gene (ALDH) superfamily. PMID:21712190

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  Using VAAST to identify an X-linked disorder resulting in lethality in male infants due to N-terminal acetyltransferase deficiency. PMID:21700266

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  Exploiting PubChem for Virtual Screening. PMID:21691435

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  Testis-specific glyceraldehyde-3-phosphate dehydrogenase: origin and evolution. PMID:21663662

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  The association of genome-wide significant spirometric loci with chronic obstructive pulmonary disease susceptibility. PMID:21659657

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  iScreen: world's first cloud-computing web server for virtual screening and de novo drug design based on TCM database@Taiwan. PMID:21647737

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  HIVToolbox, an integrated web application for investigating HIV. PMID:21647445

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  Tensor decomposition reveals concurrent evolutionary convergences and divergences and correlations with structural motifs in ribosomal RNA. PMID:21625625

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  Génie: literature-based gene prioritization at multi genomic scale. PMID:21609954

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  Taxonomic classification of metagenomic shotgun sequences with CARMA3. PMID:21586583

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  Representative proteomes: a stable, scalable and unbiased proteome set for sequence analysis and functional annotation. PMID:21556138

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  PubChem3D: Similar conformers. PMID:21554721

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  Evaluating ortholog prediction algorithms in a yeast model clade. PMID:21533202

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  Tasting soil fungal diversity with earth tongues: phylogenetic test of SATé alignments for environmental ITS data. PMID:21533038

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  Integrating diverse databases into an unified analysis framework: a Galaxy approach. PMID:21531983

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  Linking NCBI to Wikipedia: a wiki-based approach. PMID:21516242

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  mmView: a web-based viewer of the mmCIF format. PMID:21486459

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  Hierarchical clustering of shotgun proteomics data. PMID:21447708

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  Composite transcriptome assembly of RNA-seq data in a sheep model for delayed bone healing. PMID:21435219

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  Cross-sample validation provides enhanced proteome coverage in rat vocal fold mucosa. PMID:21423617

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  Current trends and new challenges of databases and web applications for systems driven biological research. PMID:21423387

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  PubChem3D: Diversity of shape. PMID:21418625

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  Data-driven high-throughput prediction of the 3-D structure of small molecules: review and progress. PMID:21417267

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  Disease and phenotype data at Ensembl. PMID:21400687

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  A signature inferred from Drosophila mitotic genes predicts survival of breast cancer patients. PMID:21386884

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  Leveraging biomedical ontologies and annotation services to organize microbiome data from Mammalian hosts. PMID:21347072

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  GOChase-II: correcting semantic inconsistencies from Gene Ontology-based annotations for gene products. PMID:21342572

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  TRAM (Transcriptome Mapper): database-driven creation and analysis of transcriptome maps from multiple sources. PMID:21333005

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  dPORE-miRNA: polymorphic regulation of microRNA genes. PMID:21326606

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  Extremely variable conservation of γ-type small, acid-soluble proteins from spores of some species in the bacterial order Bacillales. PMID:21317325

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  GeneReporter--sequence-based document retrieval and annotation. PMID:21310745

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  MicroRNAs differentially expressed in postnatal aortic development downregulate elastin via 3' UTR and coding-sequence binding sites. PMID:21305018

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  Characterization of the deleted in autism 1 protein family: implications for studying cognitive disorders. PMID:21283809

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  PubChem3D: Conformer generation. PMID:21272340

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  SciReader enables reading of medical content with instantaneous definitions. PMID:21266060

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  DIA1R is an X-linked gene related to Deleted In Autism-1. PMID:21264219

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  Genomic analysis using high-resolution single-nucleotide polymorphism arrays reveals novel microdeletions associated with premature ovarian failure. PMID:21256485

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  MicroRNAs: Meta-controllers of gene expression in synaptic activity emerge as genetic and diagnostic markers of human disease. PMID:21256154

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  TCM Database@Taiwan: the world's largest traditional Chinese medicine database for drug screening in silico. PMID:21253603

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  Measuring the evolutionary rewiring of biological networks. PMID:21253555

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  PubMed and beyond: a survey of web tools for searching biomedical literature. PMID:21245076

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  ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants. PMID:21217125

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  DNA sequence polymorphisms within the bovine guanine nucleotide-binding protein Gs subunit alpha (Gsα)-encoding (GNAS) genomic imprinting domain are associated with performance traits. PMID:21214909

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  Combating unethical publications with plagiarism detection services. PMID:21194644

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  An unbiased metagenomic search for infectious agents using monozygotic twins discordant for chronic fatigue. PMID:21194495

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  HaloWeb: the haloarchaeal genomes database. PMID:21192823

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  Literature curation of protein interactions: measuring agreement across major public databases. PMID:21183497

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  TogoDoc server/client system: smart recommendation and efficient management of life science literature. PMID:21179453

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  IsoBase: a database of functionally related proteins across PPI networks. PMID:21177658

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  Searching NCBI's dbSNP database. PMID:21154707

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  Gerontome: a web-based database server for aging-related genes and analysis pipelines. PMID:21143804

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  Refining orthologue groups at the transcript level. PMID:21143794

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  A computational approach to analyze the mechanism of action of the kinase inhibitor bafetinib. PMID:21124949

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  Bovine Genome Database: integrated tools for genome annotation and discovery. PMID:21123190

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  Entrez Gene: gene-centered information at NCBI. PMID:21115458

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  lncRNAdb: a reference database for long noncoding RNAs. PMID:21112873

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  CDD: a Conserved Domain Database for the functional annotation of proteins. PMID:21109532

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  A molecular phylogeny of Hypnales (Bryophyta) inferred from ITS2 sequence-structure data. PMID:21108782

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  T3SEdb: data warehousing of virulence effectors secreted by the bacterial Type III Secretion System. PMID:21106126

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  PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database. PMID:21097470

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  Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins. PMID:21087995

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  IUPHAR-DB: new receptors and tools for easy searching and visualization of pharmacological data. PMID:21087994

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  PhEVER: a database for the global exploration of virus-host evolutionary relationships. PMID:21081560

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  EvoPipes.net: Bioinformatic Tools for Ecological and Evolutionary Genomics. PMID:21079755

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  Conserved mechanism for sensor phosphatase control of two-component signaling revealed in the nitrate sensor NarX. PMID:21078995

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  AgBase: supporting functional modeling in agricultural organisms. PMID:21075795

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  NCBI Epigenomics: a new public resource for exploring epigenomic data sets. PMID:21075792

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  Effective--a database of predicted secreted bacterial proteins. PMID:21071416

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  Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera. PMID:21071397

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  Reactome: a database of reactions, pathways and biological processes. PMID:21067998

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  BRENDA, the enzyme information system in 2011. PMID:21062828

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  ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing. PMID:21051348

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  CCDB: a curated database of genes involved in cervix cancer. PMID:21045064

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  Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource. PMID:21045053

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  Cat-Map: putting cataract on the map. PMID:21042563

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  New tools and methods for direct programmatic access to the dbSNP relational database. PMID:21037260

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  DNA sequence polymorphisms in a panel of eight candidate bovine imprinted genes and their association with performance traits in Irish Holstein-Friesian cattle. PMID:20942903

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  Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes. PMID:20929876

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  TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea. PMID:20929871

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  Cloning and expression pattern of alkaline phosphatase during the development of Paralichthys olivaceus. PMID:20922565

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  DDPC: Dragon Database of Genes associated with Prostate Cancer. PMID:20880996

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  Promoting a structural view of biology for varied audiences: an overview of RCSB PDB resources and experiences. PMID:20877496

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  Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes. PMID:20861026

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  MatrixDB, the extracellular matrix interaction database. PMID:20852260

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  Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions. PMID:20843356

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  Exploring zebrafish genomic, functional and phenotypic data using ZFIN. PMID:20836073

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  Candidate gene prioritization based on spatially mapped gene expression: an application to XLMR. PMID:20823330

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  OpenHelix: bioinformatics education outside of a different box. PMID:20798181

  ---

  Cpl-7, a lysozyme encoded by a pneumococcal bacteriophage with a novel cell wall-binding motif. PMID:20720016

  ---

  On the power and limits of evolutionary conservation--unraveling bacterial gene regulatory networks. PMID:20699275

  ---

  Research resource: Tissue-specific transcriptomics and cistromics of nuclear receptor signaling: a web research resource. PMID:20685849

  ---

  Hashing algorithms and data structures for rapid searches of fingerprint vectors. PMID:20681581

  ---

  Genomic information infrastructure after the deluge. PMID:20670392

  ---

  Comparative Membranome expression analysis in primary tumors and derived cell lines. PMID:20668533

  ---

  Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research. PMID:20615486

  ---

  Education resources of the National Center for Biotechnology Information. PMID:20570844

  ---

  EntrezAJAX: direct web browser access to the Entrez Programming Utilities. PMID:20565938

  ---

  Origin and evolution of eukaryotic large nucleo-cytoplasmic DNA viruses. PMID:20551680

  ---

  Accessing the SEED genome databases via Web services API: tools for programmers. PMID:20546611

  ---

  SPOT: a web-based tool for using biological databases to prioritize SNPs after a genome-wide association study. PMID:20529875

  ---

  Cerebral malaria: insights from host-parasite protein-protein interactions. PMID:20529383

  ---

  Proteomics profiling of Madin-Darby canine kidney plasma membranes reveals Wnt-5a involvement during oncogenic H-Ras/TGF-beta-mediated epithelial-mesenchymal transition. PMID:20511395

  ---

  SOBA: sequence ontology bioinformatics analysis. PMID:20494974

  ---

  Targeted investigation of the Neandertal genome by array-based sequence capture. PMID:20448179

  ---

  A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches. PMID:20439257

  ---

  Widespread head-to-head hydrocarbon biosynthesis in bacteria and role of OleA. PMID:20418421

  ---

  Structural and functional analysis of the hemagglutinin-esterase of infectious salmon anaemia virus. PMID:20398710

  ---

  Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer. PMID:20108112

  ---

  GenBank. PMID:19910366

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More detailed information about this field from each metasource. ×

other molecular biology databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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biology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

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medicine

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

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literature and language

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

---

data integration and warehousing

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

---

data governance

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

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rare diseases

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:57.636780

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molecular biology medicine literature and language data integration and warehousing data governance rare diseases