Predicting protein-protein interactions between banana and Fusarium oxysporum f. sp. cubense race 4 integrating sequence and domain homologous alignment and neural network verification.
PMID:35351140
Interpretation of network-based integration from multi-omics longitudinal data.
PMID:34883510
Sequence-Based Prediction of Plant Protein-Protein Interactions by Combining Discrete Sine Transformation With Rotation Forest.
PMID:34671178
Prediction of Protein-Protein Interactions in Arabidopsis, Maize, and Rice by Combining Deep Neural Network With Discrete Hilbert Transform.
PMID:34616437
mPPI: a database extension to visualize structural interactome in a one-to-many manner.
PMID:34156447
Next-generation yeast-two-hybrid analysis with Y2H-SCORES identifies novel interactors of the MLA immune receptor.
PMID:33798202
GelFAP: Gene Functional Analysis Platform for Gastrodia elata.
PMID:33193491
A temporal hierarchy underpins the transcription factor-DNA interactome of the maize UPR.
PMID:33098715
Evolution of Sequence-based Bioinformatics Tools for Protein-protein Interaction Prediction.
PMID:33093807
Machine learning: A powerful tool for gene function prediction in plants.
PMID:32765975
Exploring dynamic protein-protein interactions in cassava through the integrative interactome network.
PMID:32300157
Coriander Genomics Database: a genomic, transcriptomic, and metabolic database for coriander.
PMID:32257241
PlaPPISite: a comprehensive resource for plant protein-protein interaction sites.
PMID:32028878
CUBIC: an atlas of genetic architecture promises directed maize improvement.
PMID:31980033
Construction and analysis of an interologous protein-protein interaction network of Camellia sinensis leaf (TeaLIPIN) from RNA-Seq data sets.
PMID:31197449
Elucidation and analyses of the regulatory networks of upland and lowland ecotypes of switchgrass in response to drought and salt stresses.
PMID:30248119
Hub Protein Controversy: Taking a Closer Look at Plant Stress Response Hubs.
PMID:29922309
Distinct tissue-specific transcriptional regulation revealed by gene regulatory networks in maize.
PMID:29879919
Large Scale Proteomic Data and Network-Based Systems Biology Approaches to Explore the Plant World.
PMID:29865292
Prediction of cassava protein interactome based on interolog method.
PMID:29222529
Distinct genetic architectures for phenotype means and plasticities in Zea mays.
PMID:29150689
Substantial contribution of genetic variation in the expression of transcription factors to phenotypic variation revealed by eRD-GWAS.
PMID:29041960
A two-step framework for inferring direct protein-protein interaction network from AP-MS data.
PMID:28950876
Construction and Optimization of a Large Gene Coexpression Network in Maize Using RNA-Seq Data.
PMID:28768814
Plant genome and transcriptome annotations: from misconceptions to simple solutions.
PMID:28062412
Techniques for the Analysis of Protein-Protein Interactions in Vivo.
PMID:27208310
PTIR: Predicted Tomato Interactome Resource.
PMID:27121261