Minimum Information for Reporting Next Generation Sequencing Genotyping
Names
More detailed information about this field from each metasource.
Minimum Information for Reporting Next Generation Sequencing Genotyping
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
MIRING
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
Minimum Information for Reporting Next Generation Sequencing Genotyping
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
MIRING
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
Minimum Information for Reporting Next Generation Sequencing Genotyping
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
MIRING
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
This source may no longer be available. No known URL could be resolved successfully.
MIRING defines the minimum information needed to describe genotyping results for HLA and KIR genes generated using Next Generation Sequencing (NGS) methods, allowing reinterpretation in light of continuous developments in reference sequence and genomic alignment resources for these genes. MIRING further defines the elements of a message to be used to exchange genotyping results. Use of MIRING ensures the long-term portability and broad application of NGS genotyping data for histocompatibility, immunogenetic and immunogenomic applications.
Description
More detailed information about this field from each metasource.
MIRING defines the minimum information needed to describe genotyping results for HLA and KIR genes generated using Next Generation Sequencing (NGS) methods, allowing reinterpretation in light of continuous developments in reference sequence and genomic alignment resources for these genes. MIRING further defines the elements of a message to be used to exchange genotyping results. Use of MIRING ensures the long-term portability and broad application of NGS genotyping data for histocompatibility, immunogenetic and immunogenomic applications.
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Webpage:
http://miring.immunogenomics.orgWebpage
More detailed information about this field from each metasource.
http://miring.immunogenomics.org
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Licence:
Name: Creative Commons Attribution 4.0 International (CC BY 4.0)Licence name
More detailed information about this field from each metasource.
Creative Commons Attribution 4.0 International (CC BY 4.0)
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/licenses/by/4.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping
PMID: 26319908
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing
PMID: 26407912
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications
More detailed information about this field from each metasource.
Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping
PMID: 26319908
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing
PMID: 26407912
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
-
Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping
PubMed citations: 14.
14 articles citing: Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping
Virtual Crossmatching in Kidney Transplantation, Shiraz Experience in Development of a Web-Based Program. PMID:34987737
Approaching Genetics Through the MHC Lens: Tools and Methods for HLA Research. PMID:34925459
Challenges for the standardized reporting of NGS HLA genotyping: Surveying gaps between clinical and research laboratories. PMID:34479742
High Resolution Haplotype Analyses of Classical HLA Genes in Families With Multiple Sclerosis Highlights the Role of HLA-DP Alleles in Disease Susceptibility. PMID:34211458
High-resolution HLA allele and haplotype frequencies in several unrelated populations determined by next generation sequencing: 17th International HLA and Immunogenetics Workshop joint report. PMID:34030896
Standard reference sequences for submission of HLA genotyping for the 18th International HLA and Immunogenetics Workshop. PMID:33719220
Bioinformatics Strategies, Challenges, and Opportunities for Next Generation Sequencing-Based HLA Genotyping. PMID:31832057
HLA alleles and haplotypes observed in 263 US families. PMID:31256909
Tools for building, analyzing and evaluating HLA haplotypes from families. PMID:30735756
Exploring the ancestry and admixture of Mexican Oaxaca Mestizos from Southeast Mexico using next-generation sequencing of 11 HLA loci. PMID:30708029
Collection and storage of HLA NGS genotyping data for the 17th International HLA and Immunogenetics Workshop. PMID:29247682
A FHIR Human Leukocyte Antigen (HLA) Interface for Platelet Transfusion Support. PMID:28850154
Application of High-Throughput Next-Generation Sequencing for HLA Typing on Buccal Extracted DNA: Results from over 10,000 Donor Recruitment Samples. PMID:27798706
Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing. PMID:26407912 -
Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing
PubMed citations: 12.
12 articles citing: Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing
Approaching Genetics Through the MHC Lens: Tools and Methods for HLA Research. PMID:34925459
Challenges for the standardized reporting of NGS HLA genotyping: Surveying gaps between clinical and research laboratories. PMID:34479742
Bioinformatics Strategies, Challenges, and Opportunities for Next Generation Sequencing-Based HLA Genotyping. PMID:31832057
Allele-Level KIR Genotyping of More Than a Million Samples: Workflow, Algorithm, and Observations. PMID:30564239
Immunogenetic factors in early immune control of human immunodeficiency virus type 1 (HIV-1) infection: Evaluation of HLA class I amino acid variants in two African populations. PMID:29289742
Collection and storage of HLA NGS genotyping data for the 17th International HLA and Immunogenetics Workshop. PMID:29247682
Deciphering the fine nucleotide diversity of full HLA class I and class II genes in a well-documented population from sub-Saharan Africa. PMID:29160618
Applying rigor and reproducibility standards to assay donor-derived cell-free DNA as a non-invasive method for detection of acute rejection and graft injury after heart transplantation. PMID:28624139
Immunogenomics: using genomics to personalize cancer immunotherapy. PMID:28528510
Application of High-Throughput Next-Generation Sequencing for HLA Typing on Buccal Extracted DNA: Results from over 10,000 Donor Recruitment Samples. PMID:27798706
The impact of Docker containers on the performance of genomic pipelines. PMID:26421241
Histoimmunogenetics Markup Language 1.0: Reporting next generation sequencing-based HLA and KIR genotyping. PMID:26319908
Tags:
Tags
More detailed information about this field from each metasource.
annotation
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
genotype
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
next generation dna sequencing
metasource: Fairsharing.org
version: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Tags
More detailed information about this field from each metasource.
annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
genotype
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
next generation dna sequencing
metasource: Fairsharing.orgversion: FAIRsharing.org: MIRING; Minimum Information for Reporting Next Generation Sequencing Genotyping; DOI: https://doi.org/10.25504/FAIRsharing.jw7rq3; Last edited: Jan. 8, 2019, 1:27 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
genotype next generation dna sequencing
Need help integrating and/or managing biomedical data?