DBASS5/3

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DBASS5/3

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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DBASS

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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dbass

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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Other names: DBASS, dbass

Database of Aberrant Splice Sites: sequences flanking cryptic and de novo 3' and 5' splice sites

Webpage:

Publications:

Publications

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DBASS3 and DBASS5: databases of aberrant 3'- and 5'-splice sites
PMID: 20929868

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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http://dx.doi.org/10.1093/nar/gkq887

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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• DBASS3 and DBASS5: databases of aberrant 3'- and 5'-splice sites PubMed citations: 30.

  30 articles citing: DBASS3 and DBASS5: databases of aberrant 3'- and 5'-splice sites

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  Background splicing as a predictor of aberrant splicing in genetic disease. PMID:35188075

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  A novel cryptic splice site mutation in COL1A2 as a cause of osteogenesis imperfecta. PMID:34381850

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  Induction of cryptic pre-mRNA splice-switching by antisense oligonucleotides. PMID:34302060

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  A Deep Intronic Variant Activates a Pseudoexon in the MTM1 Gene in a Family with X-Linked Myotubular Myopathy. PMID:33505229

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  Transposon clusters as substrates for aberrant splice-site activation. PMID:32965162

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  Systematics for types and effects of RNA variations. PMID:32951567

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  ATP7B variant c.1934T > G p.Met645Arg causes Wilson disease by promoting exon 6 skipping. PMID:32284880

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  Detection of polymorphism within leptin gene in Egyptian river buffalo and predict its effects on different molecular levels. PMID:32037476

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  The CYCLIN-DEPENDENT KINASE Module of the Mediator Complex Promotes Flowering and Reproductive Development in Pea. PMID:31964799

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  The Scope for Thalassemia Gene Therapy by Disruption of Aberrant Regulatory Elements. PMID:31766235

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  Activation of Cryptic 3' Splice-Sites by SRSF2 Contributes to Cassette Exon Skipping. PMID:31295920

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  PUF60-activated exons uncover altered 3' splice-site selection by germline missense mutations in a single RRM. PMID:29788428

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  Short-hairpin RNA against aberrant HBBIVSI-110(G>A) mRNA restores β-globin levels in a novel cell model and acts as mono- and combination therapy for β-thalassemia in primary hematopoietic stem cells. PMID:29700171

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  ABCA4 midigenes reveal the full splice spectrum of all reported noncanonical splice site variants in Stargardt disease. PMID:29162642

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  A birth of bipartite exon by intragenic deletion. PMID:28546999

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  Adding In Silico Assessment of Potential Splice Aberration to the Integrated Evaluation of BRCA Gene Unclassified Variants. PMID:26913838

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  Qualitative and quantitative analysis of FBN1 mRNA from 16 patients with Marfan Syndrome. PMID:26684006

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  In silico prediction of splice-altering single nucleotide variants in the human genome. PMID:25416802

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  Separate introns gained within short and long soluble peridinin-chlorophyll a-protein genes during radiation of Symbiodinium (Dinophyceae) clade A and B lineages. PMID:25330037

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  Optimal antisense target reducing INS intron 1 retention is adjacent to a parallel G quadruplex. PMID:24944197

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  The missing puzzle piece: splicing mutations. PMID:24294354

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  Review: Alternative Splicing (AS) of Genes As An Approach for Generating Protein Complexity. PMID:24179441

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  Pre-mRNA splicing in disease and therapeutics. PMID:22819011

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  Targeting branch sites of new exons? PMID:22730556

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  Cryptic transcripts from a ubiquitous plasmid origin of replication confound tests for cis-regulatory function. PMID:22618870

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  Clinical application of exome sequencing in undiagnosed genetic conditions. PMID:22581936

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  SpliceDisease database: linking RNA splicing and disease. PMID:22139928

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  Classification of missense substitutions in the BRCA genes: a database dedicated to Ex-UVs. PMID:21990165

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  Compensatory signals associated with the activation of human GC 5' splice sites. PMID:21609956

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  Cryptic splice sites and split genes. PMID:21470962
• http://dx.doi.org/10.1093/nar/gkq887

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Tags

More detailed information about this field from each metasource. ×

nucleotide sequence databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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gene structure, introns and exons, splice sites

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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gene transcripts

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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genetic variation

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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rna splicing

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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pathology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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model organisms

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:33.112423

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nucleic acid sequence gene structure, introns and exons, splice sites gene transcripts genetic variation rna splicing pathology model organisms