ProSAS

ECgene

Genome annotation for alternative splicing

Spliceosome Database

Hollywood

Exon annotation database

SpliceInfo

The database provides a means of investigating alternative splicing and can be used for identifying alternative splicing - related motifs, such as the exonic splicing enhancer (ESE), the exonic splici ...

SpliceNest

A tool for visualizing splicing of genes from EST data

HEXEvent

Human Exone Splicing Events

JuncDB

Exon-exon Junction database

EDAS - EST-Derived Alternative Splicing Database

EDAS is a database of alternative splicing derived from the anlaysis of genomic, protein, mRNA and EST data. It provides classification of elementary alternatives into main types, combined searches fo ...

uORFdb

Upstream ORFs and their effect of translation of downstream CDSs

ASPicDB

ASPicDB is a database designed to provide access to reliable annotations of the alternative splicing pattern of human genes, obtained by ASPic algorithm (Castrignano' et al. 2006), and to the function ...

AS-ALPS

Alternative Splicing-induced Alteration of Protein Structure

APPRIS

Annotates variants with biological data such as protein structural information, functionally important residues, conservation of functional domains and evidence of cross-species conservation.

DBASS5/3

Database of Aberrant Splice Sites: sequences flanking cryptic and de novo 3' and 5' splice sites

PSI-SGKB

Protein Structure Initiative Structural Genomics Knowledgebase

Alternative Splicing Gallery

The Alternative Splicing Gallery (ASG) takes an identifier such as an EnsEMBL gene ID or a RefSeq ID as input, and provides a graph mapping splice events to transcript information. The user can also v ...

Yeast Intron Database

This searchable database contains information about the location, structure, and function of spliceosomal introns in the nuclear genome of Saccharomyces cerevisiae. Searches produce reports for each i ...

RetNet

RetNet provides tables of genes and loci causing inherited retinal diseases, such as retinitis pigmentosa, macular degeneration and Usher syndrome, and related information. This information is provide ...

ASlive

A database for alternative splicing atlas in livestock animals. The alternative splicing in livestock animals database (ASlive.org) is a collection of alternative splicing events across tissues in li ...

Protein Geometry Database

Protein conformation and bond angles and lengths