iModulonDB

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iModulonDB

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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imodulondb

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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Other names: imodulondb

"iModulons", groups of independently-modulated genes

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Publications

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iModulonDB: a knowledgebase of microbial transcriptional regulation derived from machine learning
PMID: 33045728

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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https://doi.org/10.1093/nar/gkaa810

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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• iModulonDB: a knowledgebase of microbial transcriptional regulation derived from machine learning PubMed citations: 6.

  6 articles citing: iModulonDB: a knowledgebase of microbial transcriptional regulation derived from machine learning

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  Mathematical models to study the biology of pathogens and the infectious diseases they cause. PMID:35359802

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  proChIPdb: a chromatin immunoprecipitation database for prokaryotic organisms. PMID:34791440

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  Machine Learning Uncovers a Data-Driven Transcriptional Regulatory Network for the Crenarchaeal Thermoacidophile Sulfolobus acidocaldarius. PMID:34777307

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  Machine Learning of Bacterial Transcriptomes Reveals Responses Underlying Differential Antibiotic Susceptibility. PMID:34431696

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  The Expanding Computational Toolbox for Engineering Microbial Phenotypes at the Genome Scale. PMID:33371386

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  Machine learning uncovers independently regulated modules in the Bacillus subtilis transcriptome. PMID:33311500
• https://doi.org/10.1093/nar/gkaa810

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gene expression

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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machine learning

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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microarray experiment

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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rna-seq

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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gene transcripts

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:41.779514

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gene expression microarray experiment rna sequence gene transcripts