LungGENS
Query single-cell gene expression databases by entering a gene symbol or a list of genes or selecting a cell type of their interest. Gene query provides quantitative RNA expression of the gene of interest in each lung cell type. Cell type query returns associated selective gene signatures and genes encoding cell surface markers and transcription factors in interactive heatmap and tables.
Description
More detailed information about this field from each metasource.
Query single-cell gene expression databases by entering a gene symbol or a list of genes or selecting a cell type of their interest. Gene query provides quantitative RNA expression of the gene of interest in each lung cell type. Cell type query returns associated selective gene signatures and genes encoding cell surface markers and transcription factors in interactive heatmap and tables.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:49.667880
Webpage:
https://research.cchmc.org/pbge/lunggens/default.htmlWebpage
More detailed information about this field from each metasource.
https://research.cchmc.org/pbge/lunggens/default.html
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:49.667880
Publications:
Publications
More detailed information about this field from each metasource.
'LungGENS': a web-based tool for mapping single-cell gene expression in the developing lung
PMID: 26130332
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:49.667880
Publications
More detailed information about this field from each metasource.
'LungGENS': a web-based tool for mapping single-cell gene expression in the developing lung
PMID: 26130332
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:49.667880
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'LungGENS': a web-based tool for mapping single-cell gene expression in the developing lung
PubMed citations: 67.
67 articles citing: 'LungGENS': a web-based tool for mapping single-cell gene expression in the developing lung
Experimental Search for New Means of Pathogenetic Therapy COVID-19: Inhibitor of H2-Receptors Famotidine Increases the Effect of Oseltamivir on Survival and Immune Status of Mice Infected by A/PR/8/34 (H1N1). PMID:35283537
Fetal Tracheal Occlusion Increases Lung Basal Cells via Increased Yap Signaling. PMID:35280447
Gene-gene interaction of AhRwith and within the Wntcascade affects susceptibility to lung cancer. PMID:35101137
A single-cell atlas of mouse lung development. PMID:34927678
Radiation-activated secretory proteins of Scgb1a1 + club cells increase the efficacy of immune checkpoint blockade in lung cancer. PMID:34917944
Proliferative diabetic retinopathy transcriptomes reveal angiogenesis, anti-angiogenic therapy escape mechanisms, fibrosis and lymphatic involvement. PMID:34552123
YAP regulates alveolar epithelial cell differentiation and AGER via NFIB/KLF5/NKX2-1. PMID:34466790
Ciclesonide activates glucocorticoid signaling in neonatal rat lung but does not trigger adverse effects in the cortex and cerebellum. PMID:34126164
Obese adipose tissue modulates proinflammatory responses of mouse airway epithelial cells. PMID:34105399
Stromal Heterogeneity in the Human Proliferative Endometrium-A Single-Cell RNA Sequencing Study. PMID:34067358
COVID-19: Famotidine, Histamine, Mast Cells, and Mechanisms. PMID:33833683
Loss of Parkinson's susceptibility gene LRRK2 promotes carcinogen-induced lung tumorigenesis. PMID:33483550
Lung Gene Expression Analysis Web Portal Version 3: Lung-at-a-Glance. PMID:33385216
An integrated multiomic and quantitative label-free microscopy-based approach to study pro-fibrotic signalling in ex vivo human precision-cut lung slices. PMID:33361096
Prenatal inflammation enhances antenatal corticosteroid-induced fetal lung maturation. PMID:33328385
K2P2.1 (TREK-1) potassium channel activation protects against hyperoxia-induced lung injury. PMID:33319831
Molecular Basis of Cardiac and Vascular Injuries Associated With COVID-19. PMID:33240937
Regulation of Angiotensin- Converting Enzyme 2 in Obesity: Implications for COVID-19. PMID:33071815
Multilineage murine stem cells generate complex organoids to model distal lung development and disease. PMID:32985719
Transcriptomic Evaluation of Pulmonary Fibrosis-Related Genes: Utilization of Transgenic Mice with Modifying p38 Signal in the Lungs. PMID:32937976
COVID-19: Famotidine, Histamine, Mast Cells, and Mechanisms. PMID:32702719
Club Cell Heme Oxygenase-1 Deletion: Effects in Hyperoxia-Exposed Adult Mice. PMID:32587658
Pro-lymphangiogenic VEGFR-3 signaling modulates memory T cell responses in allergic airway inflammation. PMID:32518367
Single-Cell RNA Sequencing of Human, Macaque, and Mouse Testes Uncovers Conserved and Divergent Features of Mammalian Spermatogenesis. PMID:32504559
Glucocorticoid regulates mesenchymal cell differentiation required for perinatal lung morphogenesis and function. PMID:32460513
CPEB2-activated PDGFRα mRNA translation contributes to myofibroblast proliferation and pulmonary alveologenesis. PMID:32295602
Lung developmental arrest caused by PDGF-A deletion: consequences for the adult mouse lung. PMID:32186397
Regenerative lineages and immune-mediated pruning in lung cancer metastasis. PMID:32042191
Cyp26b1 is an essential regulator of distal airway epithelial differentiation during lung development. PMID:32001436
The RNFT2/IL-3Rα axis regulates IL-3 signaling and innate immunity. PMID:31990690
Identification of a FGF18-expressing alveolar myofibroblast that is developmentally cleared during alveologenesis. PMID:31862844
FSTL-1 Attenuation Causes Spontaneous Smoke-Resistant Pulmonary Emphysema. PMID:31834999
Comprehensive anatomic ontologies for lung development: A comparison of alveolar formation and maturation within mouse and human lung. PMID:31651362
Interleukin 1 beta and Matrix Metallopeptidase 3 Contribute to Development of Epidermal Growth Factor Receptor-Dependent Serrated Polyps in Mouse Cecum. PMID:31470007
Integrating multiomics longitudinal data to reconstruct networks underlying lung development. PMID:31432713
Integration of transcriptomic and proteomic data identifies biological functions in cell populations from human infant lung. PMID:31268347
Continuous-state HMMs for modeling time-series single-cell RNA-Seq data. PMID:31038684
Single cell RNA analysis identifies cellular heterogeneity and adaptive responses of the lung at birth. PMID:30604742
Nicotine Modulates Growth Factors and MicroRNA to Promote Inflammatory and Fibrotic Processes. PMID:30446578
Building and Regenerating the Lung Cell by Cell. PMID:30427276
Smoking-induced iron dysregulation in the lung. PMID:30075191
Reply to D'Alessandro-Gabazza et al.: Risks of Treating Idiopathic Pulmonary Fibrosis with a TAM Receptor Kinase Inhibitor. PMID:29979883
Role of integrin alpha8 in murine model of lung fibrosis. PMID:29813125
Single-Cell Deconvolution of Fibroblast Heterogeneity in Mouse Pulmonary Fibrosis. PMID:29590628
Single-Cell Transcriptome Analysis Using SINCERA Pipeline. PMID:29508300
Role for Cela1 in Postnatal Lung Remodeling and Alpha-1 Antitrypsin-Deficient Emphysema. PMID:29420065
An Introduction to Integrative Genomics and Systems Medicine in Cancer. PMID:29329216
Reconstructing differentiation networks and their regulation from time series single-cell expression data. PMID:29317474
scRNASeqDB: A Database for RNA-Seq Based Gene Expression Profiles in Human Single Cells. PMID:29206167
Female mice lacking Pald1 exhibit endothelial cell apoptosis and emphysema. PMID:29133847
Long-term expansion of alveolar stem cells derived from human iPS cells in organoids. PMID:28967890
LungMAP: The Molecular Atlas of Lung Development Program. PMID:28798251
Sin3a regulates epithelial progenitor cell fate during lung development. PMID:28619823
The Future of Bronchopulmonary Dysplasia: Emerging Pathophysiological Concepts and Potential New Avenues of Treatment. PMID:28589122
The Intersection of Aging Biology and the Pathobiology of Lung Diseases: A Joint NHLBI/NIA Workshop. PMID:28498894
The "Iron"-y of Iron Overload and Iron Deficiency in Chronic Obstructive Pulmonary Disease. PMID:28410559
Temporal, spatial, and phenotypical changes of PDGFRα expressing fibroblasts during late lung development. PMID:28408205
Expression analysis of platelet-derived growth factor receptor alpha and its ligands in the developing mouse lung. PMID:28330949
[Advances in Classification and Research Methods of Lung Epithelial Stem and Progenitor Cells]. PMID:28228225
Lung Gene Expression Analysis (LGEA): an integrative web portal for comprehensive gene expression data analysis in lung development. PMID:28070014
SLICE: determining cell differentiation and lineage based on single cell entropy. PMID:27998929
Single-cell RNA sequencing identifies diverse roles of epithelial cells in idiopathic pulmonary fibrosis. PMID:27942595
Airway Epithelial KIF3A Regulates Th2 Responses to Aeroallergens. PMID:27794000
Lethal lung hypoplasia and vascular defects in mice with conditional Foxf1 overexpression. PMID:27638768
Regeneration of the lung: Lung stem cells and the development of lung mimicking devices. PMID:27107715
Initial Suppression of Transforming Growth Factor-β Signaling and Loss of TGFBI Causes Early Alveolar Structural Defects Resulting in Bronchopulmonary Dysplasia. PMID:26878215
Stretch regulates expression and binding of chymotrypsin-like elastase 1 in the postnatal lung. PMID:26443822
Tags:
Tags
More detailed information about this field from each metasource.
gene expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:49.667880
rna-seq
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:49.667880
gene transcripts
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:49.667880
Tags
More detailed information about this field from each metasource.
gene expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:49.667880
rna-seq
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:49.667880
gene transcripts
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:33:49.667880
gene expression rna sequence gene transcripts
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