VDJServer
VDJServer is a free, scalable resource for performing immune repertoire analysis and sharing data.
Description
More detailed information about this field from each metasource.
VDJServer is a free, scalable resource for performing immune repertoire analysis and sharing data.
metasource: Fairsharing.orgversion: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
Webpage:
https://vdjserver.orgWebpage
More detailed information about this field from each metasource.
https://vdjserver.org
metasource: Fairsharing.orgversion: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
Licence:
Name: VDJServer Free but requires an accountLicence name
More detailed information about this field from each metasource.
VDJServer Free but requires an account
metasource: Fairsharing.orgversion: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
Licence URL
More detailed information about this field from each metasource.
https://vdjserver.org/
metasource: Fairsharing.orgversion: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements
PMID: 27766961
metasource: Fairsharing.org
version: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
VDJPipe: a pipelined tool for pre-processing immune repertoire sequencing data
PMID: 29020925
metasource: Fairsharing.org
version: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
Publications
More detailed information about this field from each metasource.
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements
PMID: 27766961
metasource: Fairsharing.org
version: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
VDJPipe: a pipelined tool for pre-processing immune repertoire sequencing data
PMID: 29020925
metasource: Fairsharing.org
version: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
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VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements
PubMed citations: 8.
8 articles citing: VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements
Single-Cell Sequencing Reveals the Transcriptome and TCR Characteristics of pTregs and in vitro Expanded iTregs. PMID:33868236
AIRR Community Standardized Representations for Annotated Immune Repertoires. PMID:30323809
VDJServer: A Cloud-Based Analysis Portal and Data Commons for Immune Repertoire Sequences and Rearrangements. PMID:29867956
Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data. PMID:29163494
Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data. PMID:29144493
T Cell Receptor Profiling in Type 1 Diabetes. PMID:29022222
The Repertoire Dissimilarity Index as a method to compare lymphocyte receptor repertoires. PMID:28264647
Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. PMID:27766933 -
VDJPipe: a pipelined tool for pre-processing immune repertoire sequencing data
PubMed citations: 7.
7 articles citing: VDJPipe: a pipelined tool for pre-processing immune repertoire sequencing data
Adaptive Immune Receptor Repertoire (AIRR) Community Guide to TR and IG Gene Annotation. PMID:35622332
The methods and advances of adaptive immune receptors repertoire sequencing. PMID:34522220
The Pipeline Repertoire for Ig-Seq Analysis. PMID:31114573
Identification of Subject-Specific Immunoglobulin Alleles From Expressed Repertoire Sequencing Data. PMID:30814994
Efficient Selection of Antibodies Reactive to Homologous Epitopes on Human and Mouse Hepatocyte Growth Factors by Next-Generation Sequencing-Based Analysis of the B Cell Repertoire. PMID:30669409
VDJServer: A Cloud-Based Analysis Portal and Data Commons for Immune Repertoire Sequences and Rearrangements. PMID:29867956
Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data. PMID:29163494
Tags:
Tags
More detailed information about this field from each metasource.
immune system
metasource: Fairsharing.org
version: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence alignment
metasource: Fairsharing.org
version: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
Tags
More detailed information about this field from each metasource.
immune system
metasource: Fairsharing.orgversion: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
sequence alignment
metasource: Fairsharing.orgversion: FAIRsharing.org: VDJServer; VDJServer; DOI: https://doi.org/10.25504/FAIRsharing.nzdq0f; Last edited: April 27, 2021, 7:36 a.m.; Last accessed: Jan 03 2022 7:08 p.m.
immune system sequence alignment
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