Structure, Interfaces and Alignments for Protein-Protein Interactions Database
Names
More detailed information about this field from each metasource.
Structure, Interfaces and Alignments for Protein-Protein Interactions Database
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
SNAPPI-DB
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Names
More detailed information about this field from each metasource.
Structure, Interfaces and Alignments for Protein-Protein Interactions Database
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
SNAPPI-DB
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Names
More detailed information about this field from each metasource.
Structure, Interfaces and Alignments for Protein-Protein Interactions Database
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
SNAPPI-DB
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
SNAPPI-DB is an object-oriented database of domain-domain interactions observed in structural data. The structural data is obtained from the MSD data warehouse as the MSD provides consistent data with links to many types of data about proteins and nucleic acids.
Description
More detailed information about this field from each metasource.
SNAPPI-DB is an object-oriented database of domain-domain interactions observed in structural data. The structural data is obtained from the MSD data warehouse as the MSD provides consistent data with links to many types of data about proteins and nucleic acids.
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Webpage:
http://www.compbio.dundee.ac.uk/SNAPPI/index.jspWebpage
More detailed information about this field from each metasource.
http://www.compbio.dundee.ac.uk/SNAPPI/index.jsp
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Licence:
Name: NIH Web Policies and NoticesLicence name
More detailed information about this field from each metasource.
NIH Web Policies and Notices
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Licence URL
More detailed information about this field from each metasource.
https://www.nih.gov/web-policies-notices
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
SNAPPI-DB: a database and API of Structures, iNterfaces and Alignments for Protein-Protein Interactions
PMID: 17202171
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Publications
More detailed information about this field from each metasource.
SNAPPI-DB: a database and API of Structures, iNterfaces and Alignments for Protein-Protein Interactions
PMID: 17202171
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
-
SNAPPI-DB: a database and API of Structures, iNterfaces and Alignments for Protein-Protein Interactions
PubMed citations: 23.
23 articles citing: SNAPPI-DB: a database and API of Structures, iNterfaces and Alignments for Protein-Protein Interactions
An Integrative Computational Approach for the Prediction of Human-Plasmodium Protein-Protein Interactions. PMID:33426052
Building Bridges Between Structural and Network-Based Systems Biology. PMID:30656572
PPInS: a repository of protein-protein interaction sitesbase. PMID:30127348
Dockground: A comprehensive data resource for modeling of protein complexes. PMID:28891124
DOMMINO 2.0: integrating structurally resolved protein-, RNA-, and DNA-mediated macromolecular interactions. PMID:26827237
3did: a catalog of domain-based interactions of known three-dimensional structure. PMID:24081580
2P2Idb: a structural database dedicated to orthosteric modulation of protein-protein interactions. PMID:23203891
Comparison of tertiary structures of proteins in protein-protein complexes with unbound forms suggests prevalence of allostery in signalling proteins. PMID:22554255
DOMMINO: a database of macromolecular interactions. PMID:22135305
Comprehensive, atomic-level characterization of structurally characterized protein-protein interactions: the PICCOLO database. PMID:21801404
iWRAP: An interface threading approach with application to prediction of cancer-related protein-protein interactions. PMID:21130772
DIMA 3.0: Domain Interaction Map. PMID:21097782
BISC: binary subcomplexes in proteins database. PMID:21081561
The protein common interface database (ProtCID)--a comprehensive database of interactions of homologous proteins in multiple crystal forms. PMID:21036862
Struct2Net: a web service to predict protein-protein interactions using a structure-based approach. PMID:20513650
Towards genome-scale signalling network reconstructions. PMID:20177425
PSPP: a protein structure prediction pipeline for computing clusters. PMID:19606223
ModLink+: improving fold recognition by using protein-protein interactions. PMID:19357100
JAIL: a structure-based interface library for macromolecules. PMID:18832369
Statistical analysis of interface similarity in crystals of homologous proteins. PMID:18599072
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces. PMID:18474114
The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction. PMID:18221517
Probabilistic prediction and ranking of human protein-protein interactions. PMID:17615067
Tags:
Tags
More detailed information about this field from each metasource.
molecular interaction
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein interaction
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure
metasource: Fairsharing.org
version: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Tags
More detailed information about this field from each metasource.
molecular interaction
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
protein interaction
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
structure
metasource: Fairsharing.orgversion: FAIRsharing.org: SNAPPI-DB; Structure, Interfaces and Alignments for Protein-Protein Interactions Database; DOI: https://doi.org/10.25504/FAIRsharing.zjcys8; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
molecular interaction protein protein interaction structure
Need help integrating and/or managing biomedical data?