Other names: rlbase
Exploration and analysis of R-loop mapping data with RLBase.
mapping rna sequence nucleic acid structure analysis gene expression
The Nucleic Acids Database contains information about experimentally-determined nucleic acids and complex assemblies. NDB can be used to perform searches based on annotations relating to sequence, str ...
Database for binding affinities of protein-nucleic acid complexes and their mutants.
The Database of Macromolecular Movements (MolMovDB) contains a collection of animated protein and RNA structures to assist in the exploration of macromolecular flexibility. Software for structure anal ...
Nearest Neighbor parameters for predicting RNA folding
The Swiss Portal for Immune Cell Analysis (SPICA) is a web resource dedicated to the exploration and analysis of single-cell RNA-seq data of immune cells.
NAPP (Nucleic Acids Phylogenetic Profile) enables users to retrieve RNA-rich clusters from any genome in a list of 1000+ sequenced bacterial genomes. RNA-rich clusters can be viewed separately or, alt ...
INDIGO enables the integration of annotations for the exploration and analysis of newly sequenced microbial genomes.
Within this database you will to able to find more than 12,000 extracted three-dimensional junction and kissing loop structures as well as detailed annotations for each.
RNA Characterization of Secondary Structure Motifs (RNA CoSSMos) database allows the systematic searching of all catalogued three-dimensional nucleic acid PDB structures that contain secondary structu ...
A database of ribozymes.
Molecular Modeling of RNA Structure-From Base Pair Analysis in Crystals to Structure Prediction.
A database of RNA multiloops.
Database designed to provide a comprehensive perspective and understanding of RNA motif structure, function, tertiary interactions and their relationships.
RNA aptamer 3D-structural modeling database.
Small molecule inhibitors of RNA
FPC Mapping data files from species that have been fingerprinted at Canada's Michael Smith Genome Sciences Centre (BCGSC).
A repository of cleaned PDB-derived RNA 3D structures.
RNA structural modules and their interactions
A major update of the ruminant functional and evolutionary genomics database.
A database of 3D RNA fragments within known RNA structures