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Protein Contacts Atlas

Names
More detailed information about this field from each metasource.

Protein Contacts Atlas
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

protein_contacts_atlas
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

Other names: protein_contacts_atlas

Names

More detailed information about this field from each metasource.

Protein Contacts Atlas

metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

protein_contacts_atlas

metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

An interactive resource of non-covalent contacts from over 100,000 publicly available crystal structures in the Protein Data Bank

Description

More detailed information about this field from each metasource.

An interactive resource of non-covalent contacts from over 100,000 publicly available crystal structures in the Protein Data Bank

metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

Webpage:

http://www.mrc-lmb.cam.ac.uk/pca/

Webpage

More detailed information about this field from each metasource.

http://www.mrc-lmb.cam.ac.uk/pca/

metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1038/s41594-017-0019-z
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

http://dx.doi.org/10.1038/s41594-017-0019-z

Tags:

Tags
More detailed information about this field from each metasource.

molecular interactions, pathways and networks
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

protein interactions
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

molecular interactions, pathways and networks protein interaction

More to explore:

1/20

Structural Classification Of Proteins

The SCOP database is a curated both manually and with the use of automated tools. This freely available resource aims to provide a comprehensive description of the structural and evolutionary relation ...

PDEStrIAn

The database revolves around the protein structure of catalytic PDE domains and the way PDE inhibitors can interact with them. It contains a systematic analysis of all phosphodiesterase (PDE) catalyti ...

Worldwide Protein Data Bank

The Protein Data Bank (PDB) is an archive of experimentally determined three-dimensional structures of biological macromolecules that serves a global community of researchers, educators, and students. ...

Protein Data Bank in Europe

The Protein Data Bank in Europe (PDBe) is the European resource for the collection, organisation and dissemination of data on biological macromolecular structures. It is a founding member of the world ...

CovPDB

CovPDB, a database solely dedicated to high-resolution cocrystal structures of biologically relevant cP–L complexes, curated from the Protein Data Bank

TRIP

Protein-protein interactions for mammalian TRP channels

Protein Data Bank Japan

The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules.

Pocketome: an encyclopedia of small-molecule binding sites in 4D

The Pocketome is an encyclopedia of conformational ensembles of druggable binding sites that can be identified experimentally from co-crystal structures in the Protein Data Bank. Each Pocketome entry ...

AtPID

Arabidopsis thaliana Protein Interactome Database

Protein Data Bank: Proteins, Interfaces, Structures and Assemblies

The Protein Quaternary Structure file server (PDBePISA) is an internet resource that makes available coordinates for likely quaternary states for structures contained in the Brookhaven Protein Data Ba ...

DOMMINO

Database of MacroMolecular INteractions

The Protein Database

The Entrez Protein search and retrieval system contains protein entries that have been compiled from a variety of sources, including SwissProt, PIR, PRF, PDB, and translations from annotated coding re ...

PDBsum; at-a-glance overview of macromolecular structures

PDBsum provides an overview of every macromolecular structure deposited in the Protein Data Bank (PDB), giving schematic diagrams of the molecules in each structure and of the interactions between the ...

DroID - Drosophila Interactions Database

DroID, the Drosophila Interactions Database, assembles gene and protein interaction data from a variety of sources into one easily accessible, comprehensive database. The database includes published a ...

FlyTF

FlyTF (v2) is a manually curated catalogue of Drosophila site-specific transcription factors (TFs). It integrates proteins identified as DNA-binding TFs by computational prediction based on structural ...

ProtCID

Protein Common Interface Database

FireDB

fireDB is a database of Protein Data Bank structures, ligands and annotated functional site residues. The database can be accessed by PDB codes or UniProt accession numbers as well as keywords.

mini Protein Data Bank Format

"mini Protein Data Bank Format" is a standard. This text was generated automatically. If you work on the project responsible for "mini Protein Data Bank Format" then please consider helping us by clai ...

HitPredict

Quality assessed protein-protein interactions in 9 species

PAIR

Predicted Arabidopsis Interactome Resource

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[email protected]

Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine

Protein Contacts Atlas Names More detailed information about this field from each metasource. × Protein Contacts Atlas metasource: bio.tools version: extracted_at: 2022-11-04T11:33:19.495487 protein_contacts_atlas metasource: bio.tools version: extracted_at: 2022-11-04T11:33:19.495487 Close

Webpage:

Publications: Publications More detailed information about this field from each metasource. × http://dx.doi.org/10.1038/s41594-017-0019-z metasource: bio.tools version: extracted_at: 2022-11-04T11:33:19.495487 Close

Tags: Tags More detailed information about this field from each metasource. × molecular interactions, pathways and networks metasource: bio.tools version: extracted_at: 2022-11-04T11:33:19.495487 protein interactions metasource: bio.tools version: extracted_at: 2022-11-04T11:33:19.495487 Close

More to explore:

1/20

Structural Classification Of Proteins

PDEStrIAn

Worldwide Protein Data Bank

Protein Data Bank in Europe

CovPDB

TRIP

Protein Data Bank Japan

Pocketome: an encyclopedia of small-molecule binding sites in 4D

AtPID

Protein Data Bank: Proteins, Interfaces, Structures and Assemblies

DOMMINO

The Protein Database

PDBsum; at-a-glance overview of macromolecular structures

DroID - Drosophila Interactions Database

FlyTF

ProtCID

FireDB

mini Protein Data Bank Format

HitPredict

PAIR

Protein Contacts Atlas

Names
More detailed information about this field from each metasource.

Protein Contacts Atlas
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

protein_contacts_atlas
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1038/s41594-017-0019-z
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

Tags:

Tags
More detailed information about this field from each metasource.

molecular interactions, pathways and networks
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487

protein interactions
metasource: bio.tools
version: extracted_at: 2022-11-04T11:33:19.495487