PaIntDB
PaIntDB (Pseudomonas aeruginosa Interactions Database) is a tool for network-based omics integration and visualization using protein–protein interactions in Pseudomonas aeruginosa. PaIntDB contains more than 150K protein-protein (PPI) and protein-metabolite interactions in P. aeruginosa. It allows the integration and visualization of high-throughput (proteomics, RNASeq and/or TnSeq) experimental results, using a list of genes as input and mapping them onto a network using the PPI data.
Description
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PaIntDB (Pseudomonas aeruginosa Interactions Database) is a tool for network-based omics integration and visualization using protein–protein interactions in Pseudomonas aeruginosa. PaIntDB contains more than 150K protein-protein (PPI) and protein-metabolite interactions in P. aeruginosa. It allows the integration and visualization of high-throughput (proteomics, RNASeq and/or TnSeq) experimental results, using a list of genes as input and mapping them onto a network using the PPI data.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:25:42.981431
Webpage:
https://www.paintdb.caWebpage
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Licence:
Name: BSD-3-ClauseLicence name
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Publications:
Publications
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PaIntDB: Network-based omics integration and visualization using protein-protein interactions in Pseudomonas aeruginosa
PMID: 33978706
metasource: bio.tools
version: extracted_at: 2022-11-04T11:25:42.981431
Publications
More detailed information about this field from each metasource.
PaIntDB: Network-based omics integration and visualization using protein-protein interactions in Pseudomonas aeruginosa
PMID: 33978706
metasource: bio.tools
version: extracted_at: 2022-11-04T11:25:42.981431
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PaIntDB: Network-based omics integration and visualization using protein-protein interactions in Pseudomonas aeruginosa
PubMed citations: 0.
0 articles citing: PaIntDB: Network-based omics integration and visualization using protein-protein interactions in Pseudomonas aeruginosa
Tags:
Tags
More detailed information about this field from each metasource.
protein interactions
metasource: bio.tools
version: extracted_at: 2022-11-04T11:25:42.981431
proteomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:25:42.981431
rna-seq
metasource: bio.tools
version: extracted_at: 2022-11-04T11:25:42.981431
mapping
metasource: bio.tools
version: extracted_at: 2022-11-04T11:25:42.981431
gene expression
metasource: bio.tools
version: extracted_at: 2022-11-04T11:25:42.981431
Tags
More detailed information about this field from each metasource.
protein interactions
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:25:42.981431
proteomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:25:42.981431
rna-seq
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:25:42.981431
mapping
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:25:42.981431
gene expression
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:25:42.981431
protein interaction proteomics rna sequence mapping gene expression
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