R3WW7G last accessed: 2022-11-04

Other names: Lipid MAPS, LIPID MAPS Lipidomics Gateway, LIPID Metabolites And Pathways Strategy

The LIPID MAPS Lipid Classification System is comprised of eight lipid categories, each with its own subclassification hierarchy. All lipids in the LIPID MAPS Structure Database (LMSD) have been classified using this system and have been assigned LIPID MAPS ID's which reflects their position in the classification hierarchy.

Webpage:

http://www.lipidmaps.org

Licence:

Name: Open Data Commons (ODC) Public Domain Dedication and Licence (PDDL) 1.0
URL: http://opendatacommons.org/licenses/pddl/1.0/

Publications:

Publications
More detailed information about this field from each metasource.

Update of the LIPID MAPS comprehensive classification system for lipids
PMID: 19098281
metasource: Fairsharing.org
version: FAIRsharing.org: LIPID MAPS; LIPID MAPS; DOI: https://doi.org/10.25504/FAIRsharing.cpneh8; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

LMSD: LIPID MAPS structure database
PMID: 17098933
metasource: Fairsharing.org
version: FAIRsharing.org: LIPID MAPS; LIPID MAPS; DOI: https://doi.org/10.25504/FAIRsharing.cpneh8; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

LIPID MAPS online tools for lipid research
PMID: 17584797
metasource: Fairsharing.org
version: FAIRsharing.org: LIPID MAPS; LIPID MAPS; DOI: https://doi.org/10.25504/FAIRsharing.cpneh8; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

Update of the LIPID MAPS comprehensive classification system for lipids PubMed citations: 469.

469 articles citing: Update of the LIPID MAPS comprehensive classification system for lipids

Metabolic Rewiring in Glioblastoma Cancer: EGFR, IDH and Beyond. PMID:35912242
Insights into Polyphenol-Lipid Interactions: Chemical Methods, Molecular Aspects and Their Effects on Membrane Structures. PMID:35890443
A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics. PMID:35888710
Circulating Exosome Cargoes Contain Functionally Diverse Cancer Biomarkers: From Biogenesis and Function to Purification and Potential Translational Utility. PMID:35884411
Mixotrophy in a Local Strain of Nannochloropsis&nbsp;granulata for Renewable High-Value Biomass Production on the West Coast of Sweden. PMID:35877717
Implications of Sphingolipids on Aging and Age-Related Diseases. PMID:35822041
A Divergent Selection on Breast Meat Ultimate pH, a Key Factor for Chicken Meat Quality, is Associated With Different Circulating Lipid Profiles. PMID:35812337
Outtakes from My Journey through the World of LIPID MAPS. PMID:35745008
Current State of Fluid Lipid Biomarkers for Personalized Diagnostics and Therapeutics in Schizophrenia Spectrum Disorders and Related Psychoses: A Narrative Review. PMID:35711577
PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management. PMID:35699774
Lipidomics Reveals That Rice or Flour as a Single Source of Carbohydrates Cause Adverse Health Effects in Rats. PMID:35673359
Tracing Lipid Metabolism by Alkyne Lipids and Mass Spectrometry: The State of the Art. PMID:35669564
Combining Micropunch Histology and Multidimensional Lipidomic Measurements for In-Depth Tissue Mapping. PMID:35647605
Plasmalogens and Photooxidative Stress Signaling in Myxobacteria, and How it Unmasked CarF/TMEM189 as the Δ1'-Desaturase PEDS1 for Human Plasmalogen Biosynthesis. PMID:35646900
Nipple aspirate fluid and its use for the early detection of breast cancer. PMID:35638006
Unsaturation in the Fatty Acids of Phospholipids Drastically Alters the Structure and Toxicity of Insulin Aggregates Grown in Their Presence. PMID:35580189
High-throughput untargeted metabolomics and chemometrics reveals pharmacological action and molecular mechanism of chuanxiong by ultra performance liquid chromatography combined with quadrupole-time-of-flight-mass spectrometry. PMID:35540684
De novo labeling and trafficking of individual lipid species in live cells. PMID:35504533
The Role of Lipids in Allergic Sensitization: A Systematic Review. PMID:35495627
Validation of a multiplexed and targeted lipidomics assay for accurate quantification of lipidomes. PMID:35489416
The Potential Antipyretic Mechanism of Ellagic Acid with Brain Metabolomics Using Rats with Yeast-Induced Fever. PMID:35458665
Head and Neck Cancer Susceptibility and Metabolism in Fanconi Anemia. PMID:35454946
The State of Data in Healthcare: Path Towards Standardization. PMID:35415409
Providing Adverse Outcome Pathways from the AOP-Wiki in a Semantic Web Format to Increase Usability and Accessibility of the Content. PMID:35388368
The vesicular transporter STX11 governs ATGL-mediated hepatic lipolysis and lipophagy. PMID:35372814
Lipidomic analysis identifies age-disease-related changes and potential new biomarkers in brain-derived extracellular vesicles from metachromatic leukodystrophy mice. PMID:35351138
Conception and early pregnancy in the mare: lipidomics the unexplored frontier. PMID:35350651
Identification of Metabolism-Associated Biomarkers for Early and Precise Diagnosis of Oral Squamous Cell Carcinoma. PMID:35327590
Lipid Metabolism Interplay in CRC-An Update. PMID:35323656
A concise review on lipidomics analysis in biological samples. PMID:35299875
Integrated Metabolomics and Lipidomics Reveal High Accumulation of Glycerophospholipids in Human Astrocytes under the Lipotoxic Effect of Palmitic Acid and Tibolone Protection. PMID:35269616
Small Molecule Signatures of Mice Lacking T-cell p38 Alternate Activation, a Model for Immunosuppression Conditions, after Total-Body Irradiation. PMID:35245386
Adaptation of Lipid Profiling in Depression Disease and Treatment: A Critical Review. PMID:35216147
Lipidome Alterations following Mild Traumatic Brain Injury in the Rat. PMID:35208224
LPS-induced lipid alterations in microglia revealed by MALDI mass spectrometry-based cell fingerprinting in neuroinflammation studies. PMID:35190595
Cryogenic infrared spectroscopy provides mechanistic insight into the fragmentation of phospholipid silver adducts. PMID:35147717
Lipidomics Analysis of Outer Membrane Vesicles and Elucidation of the Inositol Phosphoceramide Biosynthetic Pathway in Bacteroides thetaiotaomicron. PMID:35080445
Effects of Formyl Peptide Receptor Agonists Ac9-12 and WKYMV in In Vivo and In Vitro Acute Inflammatory Experimental Models. PMID:35053343
Structural characterization of phospholipids and sphingolipids by in-source fragmentation MALDI/TOF mass spectrometry. PMID:35013808
Lipidomic profiling of human serum enables detection of pancreatic cancer. PMID:35013261
Molecular Probes, Chemosensors, and Nanosensors for Optical Detection of Biorelevant Molecules and Ions in Aqueous Media and Biofluids. PMID:34995461
Lipid analysis by ion mobility spectrometry combined with mass spectrometry: A brief update with a perspective on applications in the clinical laboratory. PMID:34988541
Identification of Lipid Heterogeneity and Diversity in the Developing Human Brain. PMID:34977897
Novel Extraction Method for Combined Lipid and Metal Speciation From Caenorhabditis elegans With Focus on Iron Redox Status and Lipid Profiling. PMID:34957049
Advances in Lipid Extraction Methods-A Review. PMID:34948437
Lipids and Trehalose Actively Cooperate in Heat Stress Management of Schizosaccharomyces pombe. PMID:34948069
Ceramide Transfer Protein (CERT): An Overlooked Molecular Player in Cancer. PMID:34947980
Automated data-driven mass spectrometry for improved analysis of lipids with dual dissociation techniques. PMID:34939054
A Novel Approach to Characterize the Lipidome of Marine Archaeon Nitrosopumilus maritimus by Ion Mobility Mass Spectrometry. PMID:34925256
Advances in Analyzing the Breast Cancer Lipidome and Its Relevance to Disease Progression and Treatment. PMID:34914014
The Updates of Podocyte Lipid Metabolism in Proteinuric Kidney Disease. PMID:34901191
Shear-Mediated Platelet Activation is Accompanied by Unique Alterations in Platelet Release of Lipids. PMID:34900013
MCF-7 Drug Resistant Cell Lines Switch Their Lipid Metabolism to Triple Negative Breast Cancer Signature. PMID:34884983
The Many Faces of Lipids in Genome Stability (and How to Unmask Them). PMID:34884734
Development and Application of Multidimensional Lipid Libraries to Investigate Lipidomic Dysregulation Related to Smoke Inhalation Injury Severity. PMID:34874736
Long-lived Humans Have a Unique Plasma Sphingolipidome. PMID:34871393
Membrane composition and organization of Bacillus subtilis 168 and its genome-reduced derivative miniBacillus PG10. PMID:34856064
The Hitchhiker's Guide to Untargeted Lipidomics Analysis: Practical Guidelines. PMID:34822371
Advances in decomposing complex metabolite mixtures using substructure- and network-based computational metabolomics approaches. PMID:34821250
Comparative lipid profiling of murine and human atherosclerotic plaques using high-resolution MALDI MSI. PMID:34797426
Structure-specific, accurate quantitation of plasmalogen glycerophosphoethanolamine. PMID:34756256
Paediatric obesity: a systematic review and pathway mapping of metabolic alterations underlying early disease processes. PMID:34742239
Effects of the donor factors and freezing protocols on the bovine embryonic lipid profile†. PMID:34718415
Histone Deacetylase Inhibition Regulates Lipid Homeostasis in a Mouse Model of Amyotrophic Lateral Sclerosis. PMID:34681883
NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products. PMID:34662515
Serum lipids are associated with nonalcoholic fatty liver disease: a pilot case-control study in Mexico. PMID:34629052
Image-guided MALDI mass spectrometry for high-throughput single-organelle characterization. PMID:34594032
Systematic Review of Recent Lipidomics Approaches Toward Inflammatory Bowel Disease. PMID:34565718
Insights Into Walnut Lipid Metabolism From Metabolome and Transcriptome Analysis. PMID:34539744
ST-2191, an Anellated Bismorpholino Derivative of Oxy-Fingolimod, Shows Selective S1P1 Agonist and Functional Antagonist Potency In Vitro and In Vivo. PMID:34500564
Effect of Polystyrene Microplastics on Rice Seed Germination and Antioxidant Enzyme Activity. PMID:34437497
Metabolomic Studies for the Evaluation of Toxicity Induced by Environmental Toxicants on Model Organisms. PMID:34436425
Protocol for multimodal analysis of human kidney tissue by imaging mass spectrometry and CODEX multiplexed immunofluorescence. PMID:34430920
Lipidomics in Biomarker Research. PMID:34409495
Silencing of ceramide synthase 2 in hepatocytes modulates plasma ceramide biomarkers predictive of cardiovascular death. PMID:34400330
Biomarkers for the Clinical Diagnosis of Alzheimer's Disease: Metabolomics Analysis of Brain Tissue and Blood. PMID:34366852
Phospholipids: Identification and Implication in Muscle Pathophysiology. PMID:34360941
LipiDisease: associate lipids to diseases using literature mining. PMID:34358314
Shared Biological Pathways between Antipsychotics and Omega-3 Fatty Acids: A Key Feature for Schizophrenia Preventive Treatment? PMID:34206945
Oleic Acid Protects Caenorhabditis Mothers From Mating-Induced Death and the Cost of Reproduction. PMID:34179018
A Skin Lipidomics Study Reveals the Therapeutic Effects of Tanshinones in a Rat Model of Acne. PMID:34177586
Capturing Membrane Phase Separation by Dual Resolution Molecular Dynamics Simulations. PMID:34165988
Metabolomic and Lipidomic Approaches to Evaluate the Effects of Eucommia ulmoides Leaves on Milk Quality and Biochemical Properties. PMID:34141731
Plasma metabolomic profiles as affected by diet and stress in Spanish goats. PMID:34131197
An overview of lipidomics utilizing cadaver derived biological samples. PMID:34130579
Cerebrospinal fluid lipidomics for biomarkers of Alzheimer's disease. PMID:34125126
Lipid profile of bovine grade-1 blastocysts produced either in vivo or in vitro before and after slow freezing process. PMID:34078963
Hepatic lipid signatures of little brown bats (Myotis lucifugus) and big brown bats (Eptesicus fuscus) at early stages of white-nose syndrome. PMID:34078939
Comprehensive Plasma Metabolomic Profile of Patients with Advanced Neuroendocrine Tumors (NETs). Diagnostic and Biological Relevance. PMID:34072010
Untargeted Lipidomic Profiling of Dry Blood Spots Using SFC-HRMS. PMID:34064856
Chemical Derivatization-Aided High Resolution Mass Spectrometry for Shotgun Lipidome Analysis. PMID:33954940
Characterization of Extracellular Vesicles Secreted in Lentiviral Producing HEK293SF Cell Cultures. PMID:33946875
Metabolic View on Human Healthspan: A Lipidome-Wide Association Study. PMID:33946321
A resource of lipidomics and metabolomics data from individuals with undiagnosed diseases. PMID:33883556
NMR Methods for Determining Lipid Turnover via Stable Isotope Resolved Metabolomics. PMID:33805301
Mass Spectrometry-Based Shotgun Lipidomics for Cancer Research. PMID:33791973
Validation of Ultrasonic Harmonic Scalpel for Real-Time Tissue Identification Using Rapid Evaporative Ionization Mass Spectrometry. PMID:33787247
Diet and Life Stage-Associated Lipidome Remodeling in Atlantic Salmon. PMID:33754702
Lipid Metabolism in Tumor-Associated Fibroblasts. PMID:33740247
Lipid Metabolism in Tumor-Associated Natural Killer Cells. PMID:33740244
Integrated Microbiome and Metabolome Analysis Reveals a Positive Change in the Intestinal Environment of Myostatin Edited Large White Pigs. PMID:33679652
Shared genetic etiology between Parkinson's disease and blood levels of specific lipids. PMID:33674605
Obesity-Related Changes in Human Plasma Lipidome Determined by the Lipidyzer Platform. PMID:33669967
Spatially Resolved Mass Spectrometry at the Single Cell: Recent Innovations in Proteomics and Metabolomics. PMID:33656885
Shotgun lipidomics and mass spectrometry imaging unveil diversity and dynamics in Gammarus fossarum lipid composition. PMID:33615205
Lipidomic and in-gel analysis of maleic acid co-polymer nanodiscs reveals differences in composition of solubilized membranes. PMID:33594255
Spatially resolved 3D metabolomic profiling in tissues. PMID:33571119
BioPAN: a web-based tool to explore mammalian lipidome metabolic pathways on LIPID MAPS. PMID:33564392
Sphingolipidomics in Translational Sepsis Research-Biomedical Considerations and Perspectives. PMID:33553212
Bioactive Lipids in MSCs Biology: State of the Art and Role in Inflammation. PMID:33540695
Lipid droplets and lipid mediators in viral infection and immunity. PMID:33512504
The Effect of Antioxidant and Anti-Inflammatory Capacity of Diet on Psoriasis and Psoriatic Arthritis Phenotype: Nutrition as Therapeutic Tool? PMID:33499118
High Throughput Semiquantitative UHPSFC-MS/MS Lipid Profiling and Lipid Class Determination. PMID:33479755
Integrating lipidomics and genomics: emerging tools to understand cardiovascular diseases. PMID:33449144
MYC regulates ribosome biogenesis and mitochondrial gene expression programs through its interaction with host cell factor-1. PMID:33416496
The diversity and breadth of cancer cell fatty acid metabolism. PMID:33413672
Circulating 27-hydroxycholesterol and Risk of Colorectal Adenomas and Serrated Polyps. PMID:33408073
From Prevention to Disease Perturbations: A Multi-Omic Assessment of Exercise and Myocardial Infarctions. PMID:33396843
Accumulation of Cerebrospinal Fluid Glycerophospholipids and Sphingolipids in Cognitively Healthy Participants With Alzheimer's Biomarkers Precedes Lipolysis in the Dementia Stage. PMID:33390893
Marine-Derived Biologically Active Compounds for the Potential Treatment of Rheumatoid Arthritis. PMID:33383638
An international classification of inherited metabolic disorders (ICIMD). PMID:33340416
Lipid alterations in human frontal cortex in ALS-FTLD-TDP43 proteinopathy spectrum are partly related to peroxisome impairment. PMID:33332650
Maturation of Monocyte-Derived DCs Leads to Increased Cellular Stiffness, Higher Membrane Fluidity, and Changed Lipid Composition. PMID:33329576
The Biosynthesis of Enzymatically Oxidized Lipids. PMID:33329396
Nuclear Hormone Receptors and Their Ligands: Metabolites in Control of Transcription. PMID:33291787
Single-Step Extraction Coupled with Targeted HILIC-MS/MS Approach for Comprehensive Analysis of Human Plasma Lipidome and Polar Metabolome. PMID:33276464
ALDH4A1 is an atherosclerosis auto-antigen targeted by protective antibodies. PMID:33268892
Steps Toward Minimal Reporting Standards for Lipidomics Mass Spectrometry in Biomedical Research Publications. PMID:33196315
Metabolic Alterations in FMR1 Premutation Carriers. PMID:33195417
Concordant peripheral lipidome signatures in two large clinical studies of Alzheimer's disease. PMID:33173055
MetaNetX/MNXref: unified namespace for metabolites and biochemical reactions in the context of metabolic models. PMID:33156326
Dual-polarity SALDI FT-ICR MS imaging and Kendrick mass defect data filtering for lipid analysis. PMID:33125540
LiPydomics: A Python Package for Comprehensive Prediction of Lipid Collision Cross Sections and Retention Times and Analysis of Ion Mobility-Mass Spectrometry-Based Lipidomics Data. PMID:33119270
The Function and Mechanism of Lipid Molecules and Their Roles in The Diagnosis and Prognosis of Breast Cancer. PMID:33096860
Structural-based connectivity and omic phenotype evaluations (SCOPE): a cheminformatics toolbox for investigating lipidomic changes in complex systems. PMID:33094747
Comparing Extraction Methods for Biomarker Steroid Characterisation from Soil and Slurry. PMID:33088005
Comprehensive Survey on Nanobiomaterials for Bone Tissue Engineering Applications. PMID:33066127
Cross-talk between lipid homeostasis and endoplasmic reticulum stress in neurodegeneration: Insights for HIV-1 associated neurocognitive disorders (HAND). PMID:33065212
Update on LIPID MAPS classification, nomenclature, and shorthand notation for MS-derived lipid structures. PMID:33037133
High-coverage plasma lipidomics reveals novel sex-specific lipidomic fingerprints of age and BMI: Evidence from two large population cohort studies. PMID:32986697
Laser-assisted rapid evaporative ionisation mass spectrometry (LA-REIMS) as a metabolomics platform in cervical cancer screening. PMID:32980699
Recent advances in the mass spectrometric analysis of glycosphingolipidome - A review. PMID:32980104
Integrating metabolomics and targeted gene expression to uncover potential biomarkers of fungal/oomycetes-associated disease susceptibility in grapevine. PMID:32973337
A large-scale genome-lipid association map guides lipid identification. PMID:32958938
Chemically synthesized Gb3 glycosphingolipids: tools to access their function in lipid membranes. PMID:32948883
Enhancing detection and characterization of lipids using charge manipulation in electrospray ionization-tandem mass spectrometry. PMID:32890498
Differentiation and Quantification of Diastereomeric Pairs of Glycosphingolipids Using Gas-Phase Ion Chemistry. PMID:32883073
Ion mobility collision cross-section atlas for known and unknown metabolite annotation in untargeted metabolomics. PMID:32859911
Explorative Combined Lipid and Transcriptomic Profiling of Substantia Nigra and Putamen in Parkinson's Disease. PMID:32858884
Plant-Derived Nutraceuticals and Immune System Modulation: An Evidence-Based Overview. PMID:32842641
Not So Slim Anymore-Evidence for the Role of SUMO in the Regulation of Lipid Metabolism. PMID:32781719
Analytical challenges of shotgun lipidomics at different resolution of measurements. PMID:32713986
Lipids and cancer: Emerging roles in pathogenesis, diagnosis and therapeutic intervention. PMID:32711004
Genetic and environmental determinants of variation in the plasma lipidome of older Australian twins. PMID:32697195
Goslin: A Grammar of Succinct Lipid Nomenclature. PMID:32589019
Interplay Between Lipid Metabolism and Autophagy. PMID:32582708
Injectable Lipid-Based Depot Formulations: Where Do We Stand? PMID:32575406
A lipidome atlas in MS-DIAL 4. PMID:32541957
Toll-Like Receptors Induce Signal-Specific Reprogramming of the Macrophage Lipidome. PMID:32516576
Short-term inhibition of autophagy benefits pancreatic β-cells by augmenting ether lipids and peroxisomal function, and by countering depletion of n-3 polyunsaturated fatty acids after fat-feeding. PMID:32504884
Exploring the Lipidome: Current Lipid Extraction Techniques for Mass Spectrometry Analysis. PMID:32503331
The Influence of Different Forms of Silver on Selected Pathogenic Bacteria. PMID:32456144
β-Oxidation and autophagy are critical energy providers during acute glucose depletion in Saccharomyces cerevisiae. PMID:32430326
HILIC-ESI-FTMS with All Ion Fragmentation (AIF) Scans as a Tool for Fast Lipidome Investigations. PMID:32423109
Functional diversity in a lipidome. PMID:32398365
Lipidomic Profiling for Serum Biomarkers in Mice Exposed to Ionizing Radiation. PMID:32362795
Differential annotation of converted metabolites (DAC-Met): Exploration of Maoto (Ma-huang-tang)-derived metabolites in plasma using high-resolution mass spectrometry. PMID:32335721
Lipidomics reveals associations between rice quality traits. PMID:32306193
Lipidomic study of cell lines reveals differences between breast cancer subtypes. PMID:32287294
Annexin A1 Regulates NLRP3 Inflammasome Activation and Modifies Lipid Release Profile in Isolated Peritoneal Macrophages. PMID:32283822
Male sterile 305 Mutation Leads the Misregulation of Anther Cuticle Formation by Disrupting Lipid Metabolism in Maize. PMID:32260292
Crosstalk Between the Gut Microbiome and Bioactive Lipids: Therapeutic Targets in Cognitive Frailty. PMID:32219095
Improving lipid mapping in Genome Scale Metabolic Networks using ontologies. PMID:32215752
Recent applications of mass spectrometry in bacterial lipidomics. PMID:32189013
Metabolome Analysis Identified Okaramines in the Soybean Rhizosphere as a Legacy of Hairy Vetch. PMID:32153648
Metabolic alterations in the erythrocyte during blood-stage development of the malaria parasite. PMID:32103749
Energy-stress-mediated AMPK activation inhibits ferroptosis. PMID:32029897
Toward a Standardized Strategy of Clinical Metabolomics for the Advancement of Precision Medicine. PMID:32013105
Methods of the Analysis of Oxylipins in Biological Samples. PMID:31952163
Styrene maleic-acid lipid particles (SMALPs) into detergent or amphipols: An exchange protocol for membrane protein characterisation. PMID:31945320
Anabolic androgenic steroids exert a selective remodeling of the plasma lipidome that mirrors the decrease of the de novo lipogenesis in the liver. PMID:31925559
Fatty acids - from energy substrates to key regulators of cell survival, proliferation and effector function. PMID:31922096
Analytical Strategies in Lipidomics for Discovery of Functional Biomarkers from Human Saliva. PMID:31885741
Shaping of Innate Immune Response by Fatty Acid Metabolite Palmitate. PMID:31847240
The Influence of Dietary Fatty Acids on Immune Responses. PMID:31817726
The Fusion of Lipid and DNA Nanotechnology. PMID:31816934
The effect of acyl-CoA synthetase long-chain family member 5 on triglyceride synthesis in bovine preadipocytes. PMID:31807636
Shared reference materials harmonize lipidomics across MS-based detection platforms and laboratories. PMID:31732502
The Effects of Meldonium on the Renal Acute Ischemia/Reperfusion Injury in Rats. PMID:31731785
Lipidomics by HILIC-Ion Mobility-Mass Spectrometry. PMID:31729657
Enzyme annotation in UniProtKB using Rhea. PMID:31688925
LXRβ controls glioblastoma cell growth, lipid balance, and immune modulation independently of ABCA1. PMID:31664073
Ultrahigh-Performance capillary liquid chromatography-mass spectrometry at 35 kpsi for separation of lipids. PMID:31607445
High-Performance Molecular Imaging with MALDI Trapped Ion-Mobility Time-of-Flight (timsTOF) Mass Spectrometry. PMID:31593446
Stoichiometric gene-to-reaction associations enhance model-driven analysis performance: Metabolic response to chronic exposure to Aldrin in prostate cancer. PMID:31416420
Targeting Cellular Metabolism Modulates Head and Neck Oncogenesis. PMID:31416244
Polar Lipids in Starch-Rich Commodities to be Analyzed with LC-MS-Based Metabolomics-Optimization of Ionization Parameters and High-Throughput Extraction Protocols. PMID:31408959
Lipid and Lipid Raft Alteration in Aging and Neurodegenerative Diseases: A Window for the Development of New Biomarkers. PMID:31382686
Cholesterol Acceptors Regulate the Lipidome of Macrophage Foam Cells. PMID:31382484
Lipid remodeling regulator 1 (LRL1) is differently involved in the phosphorus-depletion response from PSR1 in Chlamydomonas reinhardtii. PMID:31350858
Metabolome signature of autism in the human prefrontal cortex. PMID:31263778
Improved quantitation of lipid classes using supercritical fluid chromatography with a charged aerosol detector. PMID:31201290
Characterization of Bulk Phosphatidylcholine Compositions in Human Plasma Using Side-Chain Resolving Lipidomics. PMID:31181753
LION/web: a web-based ontology enrichment tool for lipidomic data analysis. PMID:31141612
The Effect of Anticoagulants, Temperature, and Time on the Human Plasma Metabolome and Lipidome from Healthy Donors as Determined by Liquid Chromatography-Mass Spectrometry. PMID:31126114
A comparative analysis of egg provisioning using mass spectrometry during rapid life history evolution in sea urchins. PMID:31102332
Reconstructed Skin Models Revealed Unexpected Differences in Epidermal African and Caucasian Skin. PMID:31092846
A Comprehensive UHPLC Ion Mobility Quadrupole Time-of-Flight Method for Profiling and Quantification of Eicosanoids, Other Oxylipins, and Fatty Acids. PMID:31074960
Optic Nerve Lipidomics Reveal Impaired Glucosylsphingosine Lipids Pathway in Glaucoma. PMID:31022733
CFM-ID 3.0: Significantly Improved ESI-MS/MS Prediction and Compound Identification. PMID:31013937
Metabolic signature of extracellular vesicles depends on the cell culture conditions. PMID:31007875
Tutorial on lipidomics. PMID:30926037
Expanding lipidomics coverage: effective ultra performance liquid chromatography-high resolution mass spectrometer methods for detection and quantitation of cardiolipin, phosphatidylglycerol, and lysyl-phosphatidylglycerol. PMID:30919213
Glycerophospholipids pathways and chromosomal instability in gastric cancer: Global lipidomics analysis. PMID:30918592
Plasma lipidome variation during the second half of the human lifespan is associated with age and sex but minimally with BMI. PMID:30893377
Repeated administration of the NSAID meloxicam alters the plasma and urine lipidome. PMID:30867479
Metabolomic Insights into Human Arboviral Infections: Dengue, Chikungunya, and Zika Viruses. PMID:30845653
Comparative label-free lipidomic analysis of Mycobacterium tuberculosis during dormancy and reactivation. PMID:30842473
Lipophilic Allergens, Different Modes of Allergen-Lipid Interaction and Their Impact on Asthma and Allergy. PMID:30837983
An LC-MS-based lipidomics pre-processing framework underpins rapid hypothesis generation towards CHO systems biotechnology. PMID:30830409
Impact of hydroxyurea therapy on serum fatty acids of β-thalassemia patients. PMID:30830370
Absolute quantitative lipidomics reveals lipidome-wide alterations in aging brain. PMID:30830317
Utilisation of Ambient Laser Desorption Ionisation Mass Spectrometry (ALDI-MS) Improves Lipid-Based Microbial Species Level Identification. PMID:30816263
Ion mobility conformational lipid atlas for high confidence lipidomics. PMID:30816114
Identification of bioactive metabolites using activity metabolomics. PMID:30814649
Discovery of Salmonella trehalose phospholipids reveals functional convergence with mycobacteria. PMID:30804000
Detection and Structural Characterization of Ether Glycerophosphoethanolamine from Cortical Lysosomes Following Traumatic Brain Injury Using UPLC-HDMSE. PMID:30790445
Emerging Diversity in Lipid-Protein Interactions. PMID:30758191
Advances of supercritical fluid chromatography in lipid profiling. PMID:30740251
Directed Non-targeted Mass Spectrometry and Chemical Networking for Discovery of Eicosanoids and Related Oxylipins. PMID:30661990
The Role of Lipids in Parkinson's Disease. PMID:30621069
In-depth structural characterization of phospholipids by pairing solution photochemical reaction with charge inversion ion/ion chemistry. PMID:30613841
Inhibition of early response genes prevents changes in global joint metabolomic profiles in mouse post-traumatic osteoarthritis. PMID:30572121
Tumor suppressor RARRES1- A novel regulator of fatty acid metabolism in epithelial cells. PMID:30557378
Class I Phosphoinositide 3-Kinase PIK3CA/p110α and PIK3CB/p110β Isoforms in Endometrial Cancer. PMID:30544563
Intricate role of mitochondrial lipid in mitophagy and mitochondrial apoptosis: its implication in cancer therapeutics. PMID:30539200
Yeast and human P4-ATPases transport glycosphingolipids using conserved structural motifs. PMID:30530492
Modeling Meets Metabolomics-The WormJam Consensus Model as Basis for Metabolic Studies in the Model Organism Caenorhabditis elegans. PMID:30488036
Stable Isotope-Labeled Lipidomics to Unravel the Heterogeneous Development Lipotoxicity. PMID:30400243
Does lipidomic serum analysis support the assessment of digestive efficiency in chickens? PMID:30325459
Exosomal lipids for classifying early and late stage non-small cell lung cancer. PMID:30292300
Updates in Rhea: SPARQLing biochemical reaction data. PMID:30272209
Comprehensive and Reproducible Untargeted Lipidomic Workflow Using LC-QTOF Validated for Human Plasma Analysis. PMID:30256116
Serum Lipidomics Profiling to Identify Biomarkers for Non-Small Cell Lung Cancer. PMID:30175133
MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines. PMID:30115755
The integration of LC-MS and NMR for the analysis of low molecular weight trace analytes in complex matrices. PMID:30024655
Unbiased Lipidomic Profiling of Triple-Negative Breast Cancer Tissues Reveals the Association of Sphingomyelin Levels with Patient Disease-Free Survival. PMID:30011843
Lysophospholipid Signaling in the Epithelial Ovarian Cancer Tumor Microenvironment. PMID:29987226
Karenia brevis allelopathy compromises the lipidome, membrane integrity, and photosynthesis of competitors. PMID:29934632
Effects of atopic dermatitis and gender on sebum lipid mediator and fatty acid profiles. PMID:29886894
Importance of Hydrophilic Groups on Modulating the Structural, Mechanical, and Interfacial Properties of Bilayers: A Comparative Molecular Dynamics Study of Phosphatidylcholine and Ion Pair Amphiphile Membranes. PMID:29882873
The Role of Lipid Metabolism for Neural Stem Cell Regulation. PMID:29765860
Lipidome Evolution in Mammalian Tissues. PMID:29762743
A novel sample preparation strategy for shotgun lipidomics of phospholipids employing multilamellar vesicles. PMID:29736703
Identification of novel lipid modifications and intermembrane dynamics in Corynebacterium glutamicum using high-resolution mass spectrometry. PMID:29724782
Synthesis of multi-omic data and community metabolic models reveals insights into the role of hydrogen sulfide in colon cancer. PMID:29704665
Discovery of Lipidome Alterations Following Traumatic Brain Injury via High-Resolution Metabolomics. PMID:29671324
Percutaneous Closure of Left Atrial Appendage significantly affects Lipidome Metabolism. PMID:29650978
LipidPedia: a comprehensive lipid knowledgebase. PMID:29648583
Sequence-Based Analysis of Lipid-Related Metabolites in a Multiethnic Study. PMID:29610217
Systematic Analysis of Fatty Acids in Human Cells with a Multiplexed Isobaric Tag (TMT)-Based Method. PMID:29521506
Paradigm shift - Metabolic transformation of docosahexaenoic and eicosapentaenoic acids to bioactives exemplify the promise of fatty acid drug discovery. PMID:29499340
Study of the Serum Metabolomic Profile in Nonalcoholic Fatty Liver Disease: Research and Clinical Perspectives. PMID:29495258
Dynamic remodeling of lipids coincides with dengue virus replication in the midgut of Aedes aegypti mosquitoes. PMID:29447265
Lipidomics unveils the complexity of the lipidome in metabolic diseases. PMID:29374337
Lipid-mediated signals that regulate mitochondrial biology. PMID:29348169
Optic Nerve Regeneration After Crush Remodels the Injury Site: Molecular Insights From Imaging Mass Spectrometry. PMID:29340649
Untargeted Metabolomics Approach in Halophiles: Understanding the Biodeterioration Process of Building Materials. PMID:29321766
UV Lamp as a Facile Ozone Source for Structural Analysis of Unsaturated Lipids Via Electrospray Ionization-Mass Spectrometry. PMID:29235039
Simultaneous lipidomic and transcriptomic profiling in mouse brain punches of acute epileptic seizure model compared to controls. PMID:29208697
Proposal for a common nomenclature for fragment ions in mass spectra of lipids. PMID:29161304
Mild heat induces a distinct "eustress" response in Chinese Hamster Ovary cells but does not induce heat shock protein synthesis. PMID:29142280
WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research. PMID:29136241
UC2 search: using unique connectivity of uncharged compounds for metabolite annotation by database searching in mass spectrometry-based metabolomics. PMID:29040459
Rapid determination of medulloblastoma subgroup affiliation with mass spectrometry using a handheld picosecond infrared laser desorption probe. PMID:28989676
Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma. PMID:28986437
Lipid and Carbohydrate Metabolism in Caenorhabditis elegans. PMID:28978773
The ESRP1-GPR137 axis contributes to intestinal pathogenesis. PMID:28975893
Spontaneous charged lipid transfer between lipid vesicles. PMID:28974701
Avocado fruit maturation and ripening: dynamics of aliphatic acetogenins and lipidomic profiles from mesocarp, idioblasts and seed. PMID:28969589
Establishing multiple omics baselines for three Southeast Asian populations in the Singapore Integrative Omics Study. PMID:28935855
Lipidomic Signatures of Nonhuman Primates with Radiation-Induced Hematopoietic Syndrome. PMID:28852188
Multiplexed silicon photonic sensor arrays enable facile characterization of coagulation protein binding to nanodiscs with variable lipid content. PMID:28801460
Neuronal Cholesterol Accumulation Induced by Cyp46a1 Down-Regulation in Mouse Hippocampus Disrupts Brain Lipid Homeostasis. PMID:28744197
Matrix coating assisted by an electric field (MCAEF) for enhanced tissue imaging by MALDI-MS. PMID:28706636
Lipidomics in translational research and the clinical significance of lipid-based biomarkers. PMID:28668521
A Robust Lipidomics Workflow for Mammalian Cells, Plasma, and Tissue Using Liquid-Chromatography High-Resolution Tandem Mass Spectrometry. PMID:28660577
Lipid homeostasis and regulated cell death. PMID:28645028
Biofluid lipidome: a source for potential diagnostic biomarkers. PMID:28639235
The early metabolomic response of adipose tissue during acute cold exposure in mice. PMID:28615704
The role of endothelial lipase in lipid metabolism, inflammation, and cancer. PMID:28540715
Detailed Structural Characterization of Sphingolipids via 193 nm Ultraviolet Photodissociation and Ultra High Resolution Tandem Mass Spectrometry. PMID:28455688
Lipidomic Signature of Progression of Chronic Kidney Disease in the Chronic Renal Insufficiency Cohort. PMID:28451650
PIF* promotes brain re-myelination locally while regulating systemic inflammation- clinically relevant multiple sclerosis M.smegmatis model. PMID:28423529
Lipidomics by ultrahigh performance liquid chromatography-high resolution mass spectrometry and its application to complex biological samples. PMID:28415015
LipidFinder: A computational workflow for discovery of lipids identifies eicosanoid-phosphoinositides in platelets. PMID:28405621
Phospholipidomic Studies in Human Cornea From Climatic Droplet Keratopathy. PMID:28401586
The lipidome in major depressive disorder: Shared genetic influence for ether-phosphatidylcholines, a plasma-based phenotype related to inflammation, and disease risk. PMID:28365467
Defining the Baseline and Oxidant Perturbed Lipidomic Profiles of Daphnia magna. PMID:28294984
Metabolic crosstalk between membrane and storage lipids facilitates heat stress management in Schizosaccharomyces pombe. PMID:28282432
Common cases of improper lipid annotation using high-resolution tandem mass spectrometry data and corresponding limitations in biological interpretation. PMID:28263877
A Lipidomic and Metabolomic Serum Signature from Nonhuman Primates Exposed to Ionizing Radiation. PMID:28220056
NMR metabolic fingerprints of murine melanocyte and melanoma cell lines: application to biomarker discovery. PMID:28198377
Metabolomic and Metagenomic Analysis of Two Crude Oil Production Pipelines Experiencing Differential Rates of Corrosion. PMID:28197141
Metabolomics: A Primer. PMID:28196646
Infection-derived lipids elicit an immune deficiency circuit in arthropods. PMID:28195158
Opinion article on lipidomics: Inherent challenges of lipidomic analysis of sphingolipids. PMID:28161582
Changes in Lipidome Composition during Brain Development in Humans, Chimpanzees, and Macaque Monkeys. PMID:28158622
Lipidomics reveals dramatic lipid compositional changes in the maturing postnatal lung. PMID:28145528
Lipidome determinants of maximal lifespan in mammals. PMID:28127055
Budding Yeast: An Ideal Backdrop for In vivo Lipid Biochemistry. PMID:28119915
Proposed Confidence Scale and ID Score in the Identification of Known-Unknown Compounds Using High Resolution MS Data. PMID:28116700
Comparing identified and statistically significant lipids and polar metabolites in 15-year old serum and dried blood spot samples for longitudinal studies. PMID:27958645
Impaired liver regeneration in aged mice can be rescued by silencing Hippo core kinases MST1 and MST2. PMID:27940445
Internet Databases of the Properties, Enzymatic Reactions, and Metabolism of Small Molecules-Search Options and Applications in Food Science. PMID:27929431
Recent advances in expanding the coverage of the lipidome. PMID:27915214
YMDB 2.0: a significantly expanded version of the yeast metabolome database. PMID:27899612
ClassyFire: automated chemical classification with a comprehensive, computable taxonomy. PMID:27867422
Rapid Evaporative Ionisation Mass Spectrometry (REIMS) Provides Accurate Direct from Culture Species Identification within the Genus Candida. PMID:27841356
Lipidomics-Reshaping the Analysis and Perception of Type 2 Diabetes. PMID:27827927
Glycosphingolipid-Protein Interaction in Signal Transduction. PMID:27754465
Computational Modeling of Lipid Metabolism in Yeast. PMID:27730126
Psoralen and Ultraviolet A Light Treatment Directly Affects Phosphatidylinositol 3-Kinase Signal Transduction by Altering Plasma Membrane Packing. PMID:27687726
Alterations in Serum Polyunsaturated Fatty Acids and Eicosanoids in Patients with Mild to Moderate Chronic Obstructive Pulmonary Disease (COPD). PMID:27657052
Metabolomic profiling predicts outcome of rituximab therapy in rheumatoid arthritis. PMID:27651926
Lipid specific molecular ion emission as a function of the primary ion characteristics in TOF-SIMS. PMID:27648391
Guinea pig genital tract lipidome reveals in vivo and in vitro regulation of phosphatidylcholine 16:0/18:1 and contribution to Chlamydia trachomatis serovar D infectivity. PMID:27642272
Food-induced changes of lipids in rat neuronal tissue visualized by ToF-SIMS imaging. PMID:27596988
Phospholipid Species in Newborn and 4 Month Old Infants after Consumption of Different Formulas or Breast Milk. PMID:27571269
Enhanced Lipidome Coverage in Shotgun Analyses by using Gas-Phase Fractionation. PMID:27562503
Liberating Chiral Lipid Mediators, Inflammatory Enzymes, and LIPID MAPS from Biological Grease. PMID:27555328
Simple LC-MS Method for Differentiation of Isobaric Phosphatidylserines and Phosphatidylcholines with Deuterated Mobile Phase Additives. PMID:27532481
Fatty Acid Oxidation Mediated by Acyl-CoA Synthetase Long Chain 3 Is Required for Mutant KRAS Lung Tumorigenesis. PMID:27477280
PreImplantation factor (PIF) therapy provides comprehensive protection against radiation induced pathologies. PMID:27449294
Biological Effects of Naturally Occurring Sphingolipids, Uncommon Variants, and Their Analogs. PMID:27393119
Imaging mass spectrometry: Molecular microscopy for the new age of biology and medicine. PMID:27159897
Plasma lipidomics profiling identified lipid biomarkers in distinguishing early-stage breast cancer from benign lesions. PMID:27153558
A protocol for the systematic and quantitative measurement of protein-lipid interactions using the liposome-microarray-based assay. PMID:27149326
Quantitative analysis of N-acylphosphatidylethanolamine molecular species in rat brain using solid-phase extraction combined with reversed-phase chromatography and tandem mass spectrometry. PMID:27144983
Use of lipidomics to investigate sebum dysfunction in juvenile acne. PMID:27127078
Annotation of the human cerebrospinal fluid lipidome using high resolution mass spectrometry and a dedicated data processing workflow. PMID:27110228
Sphingosine-1-Phosphate Lyase Deficient Cells as a Tool to Study Protein Lipid Interactions. PMID:27100999
Bioprospecting of Marine Macrophytes Using MS-Based Lipidomics as a New Approach. PMID:27005634
Wolbachia Modulates Lipid Metabolism in Aedes albopictus Mosquito Cells. PMID:26994075
Emerging roles for lipids in non-apoptotic cell death. PMID:26967968
Lipid interaction sites on channels, transporters and receptors: Recent insights from molecular dynamics simulations. PMID:26946244
Metabolomics in rheumatic diseases: desperately seeking biomarkers. PMID:26935283
Ion mobility mass spectrometry enhances low-abundance species detection in untargeted lipidomics. PMID:26900387
Purity matters: A workflow for the valid high-resolution lipid profiling of mitochondria from cell culture samples. PMID:26892142
Integration of lipidomics and transcriptomics unravels aberrant lipid metabolism and defines cholesteryl oleate as potential biomarker of prostate cancer. PMID:26865432
Reduced expression of CDP-DAG synthase changes lipid composition and leads to male sterility in Drosophila. PMID:26791243
Extraction, chromatographic and mass spectrometric methods for lipid analysis. PMID:26762903
Comprehensive systems biology analysis of a 7-month cigarette smoke inhalation study in C57BL/6 mice. PMID:26731301
Unbiased Metabolomic Investigation of Alzheimer's Disease Brain Points to Dysregulation of Mitochondrial Aspartate Metabolism. PMID:26717242
Requirement of Phosphoinositides Containing Stearic Acid To Control Cell Polarity. PMID:26711260
Changes in PTGS1 and ALOX12 Gene Expression in Peripheral Blood Mononuclear Cells Are Associated with Changes in Arachidonic Acid, Oxylipins, and Oxylipin/Fatty Acid Ratios in Response to Omega-3 Fatty Acid Supplementation. PMID:26672987
Evidence of a molecular boundary lubricant at snakeskin surfaces. PMID:26655468
Electron-induced dissociation (EID) for structure characterization of glycerophosphatidylcholine: determination of double-bond positions and localization of acyl chains. PMID:26634966
Optimized Protocol To Analyze Changes in the Lipidome of Xenografts after Treatment with 2-Hydroxyoleic Acid. PMID:26607740
Effects of Cigarette Smoke, Cessation, and Switching to Two Heat-Not-Burn Tobacco Products on Lung Lipid Metabolism in C57BL/6 and Apoe-/- Mice-An Integrative Systems Toxicology Analysis. PMID:26582801
Mechanotransduction in primary human osteoarthritic chondrocytes is mediated by metabolism of energy, lipids, and amino acids. PMID:26573901
Targeting host lipid synthesis and metabolism to inhibit dengue and hepatitis C viruses. PMID:26526588
The systematic analysis of protein-lipid interactions comes of age. PMID:26507169
COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. PMID:26491418
ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli. PMID:26481353
Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools. PMID:26467476
Metabolomics in childhood diabetes. PMID:26420304
The LUX Score: A Metric for Lipidome Homology. PMID:26393792
Translational metabolomics in cancer research. PMID:26329905
The Hepatic Lipidome: A Gateway to Understanding the Pathogenes is of Alcohol-Induced Fatty Liver. PMID:26278391
Unsaturated fatty acids as high-affinity ligands of the C-terminal Per-ARNT-Sim domain from the Hypoxia-inducible factor 3α. PMID:26237540
Metabolomic profiling of Burkholderia pseudomallei using UHPLC-ESI-Q-TOF-MS reveals specific biomarkers including 4-methyl-5-thiazoleethanol and unique thiamine degradation pathway. PMID:26097677
Lipidomics by Supercritical Fluid Chromatography. PMID:26090714
Untargeted Metabolomics Reveals Predominant Alterations in Lipid Metabolism Following Light Exposure in Broccoli Sprouts. PMID:26084047
Glycerophospholipid Profiles of Bats with White-Nose Syndrome. PMID:26052639
Introduction to Thematic Review Series: Phospholipases: Central Role in Lipid Signaling and Disease. PMID:26031662
Omega-3 fatty acids, lipid rafts, and T cell signaling. PMID:26001374
Reverse enGENEering of Regulatory Networks from Big Data: A Roadmap for Biologists. PMID:25983554
Transcriptome Analysis Comparison of Lipid Biosynthesis in the Leaves and Developing Seeds of Brassica napus. PMID:25965272
Mitochondrial responses to extreme environments: insights from metabolomics. PMID:25949809
Temperament type specific metabolite profiles of the prefrontal cortex and serum in cattle. PMID:25927228
ESI-MS/MS and MALDI-IMS Localization Reveal Alterations in Phosphatidic Acid, Diacylglycerol, and DHA in Glioma Stem Cell Xenografts. PMID:25880480
A rapid ambient ionization-mass spectrometry approach to monitoring the relative abundance of isomeric glycerophospholipids. PMID:25880027
Inflammaging and cancer: a challenge for the Mediterranean diet. PMID:25859884
MALDI Mass Spectrometry Imaging of Lipids and Gene Expression Reveals Differences in Fatty Acid Metabolism between Follicular Compartments in Porcine Ovaries. PMID:25756245
Targeting of the hydrophobic metabolome by pathogens. PMID:25754025
Metabolomics in the developmental origins of obesity and its cardiometabolic consequences. PMID:25631626
Lipid metabolism, apoptosis and cancer therapy. PMID:25561239
Autonomous metabolomics for rapid metabolite identification in global profiling. PMID:25496351
Ion mobility-derived collision cross section as an additional measure for lipid fingerprinting and identification. PMID:25495617
Lipidomic analysis of cerebrospinal fluid by mass spectrometry-based methods. PMID:25488626
Metabolite localization by atmospheric pressure high-resolution scanning microprobe matrix-assisted laser desorption/ionization mass spectrometry imaging in whole-body sections and individual organs of the rove beetle Paederus riparius. PMID:25424178
Metabolism of propionic acid to a novel acyl-coenzyme A thioester by mammalian cell lines and platelets. PMID:25424005
Dose-dependent metabolic alterations in human cells exposed to gamma irradiation. PMID:25419661
Cigarette smoke increases cardiomyocyte ceramide accumulation and inhibits mitochondrial respiration. PMID:25416336
Towards automated discrimination of lipids versus peptides from full scan mass spectra. PMID:25414814
Principles and practice of lipidomics. PMID:25409862
Liposomes in tissue engineering and regenerative medicine. PMID:25401172
Lipidomic assessment of plasma and placenta of women with early-onset preeclampsia. PMID:25329382
A high-fat diet suppresses de novo lipogenesis and desaturation but not elongation and triglyceride synthesis in mice. PMID:25271296
A semi-automated methodology for finding lipid-related GO terms. PMID:25209026
Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view. PMID:25078324
The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience. PMID:24980485
Characterization of complex lipid mixtures in contaminant exposed JEG-3 cells using liquid chromatography and high-resolution mass spectrometry. PMID:24969426
Insulin increases ceramide synthesis in skeletal muscle. PMID:24949486
Characterization of acyl chain position in unsaturated phosphatidylcholines using differential mobility-mass spectrometry. PMID:24939921
Enhanced lipid isomer separation in human plasma using reversed-phase UPLC with ion-mobility/high-resolution MS detection. PMID:24891331
Do lipids influence the allergic sensitization process? PMID:24880633
NMR based metabonomics study on celiac disease in the blood serum. PMID:24834271
LIPID MAPS-Nature Lipidomics Gateway: An Online Resource for Students and Educators Interested in Lipids. PMID:24764601
Predicting glycerophosphoinositol identities in lipidomic datasets using VaLID (Visualization and Phospholipid Identification)--an online bioinformatic search engine. PMID:24701584
Statistical methods for the analysis of high-throughput metabolomics data. PMID:24688690
LC-MS-based Metabolomics of Xenobiotic-induced Toxicities. PMID:24688689
LipidMiner: a software for automated identification and quantification of lipids from multiple liquid chromatography/mass spectrometry data files. PMID:24623704
Lipid integration in neurodegeneration: an overview of Alzheimer's disease. PMID:24590317
Modeling of eicosanoid fluxes reveals functional coupling between cyclooxygenases and terminal synthases. PMID:24559999
Glycerophospholipid analysis of Eastern red bat (Lasiurus borealis) hair by electrospray ionization tandem mass spectrometry. PMID:24532214
Systems-Level Lipid Analysis Methodologies for Qualitative and Quantitative Investigation of Lipid Signaling Events During Wound Healing. PMID:24527363
Candidate mediators of chondrocyte mechanotransduction via targeted and untargeted metabolomic measurements. PMID:24440608
Impact of lipid nutrition on neural stem/progenitor cells. PMID:24260036
Analysis of lipid experiments (ALEX): a software framework for analysis of high-resolution shotgun lipidomics data. PMID:24244551
13C-isotope-based protocol for prenyl lipid metabolic analysis in zebrafish embryos. PMID:24177291
Lipid metabolism emerges as a promising target for malignant glioma therapy. PMID:24159371
Profiling the triacylglyceride contents in bat integumentary lipids by preparative thin layer chromatography and MALDI-TOF mass spectrometry. PMID:24056580
Alterations in cerebrospinal fluid glycerophospholipids and phospholipase A2 activity in Alzheimer's disease. PMID:23868911
Crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid-assisted flavoprotein strategy for regioselective aromatic hydroxylation. PMID:23864660
Nutritional lipidomics: molecular metabolism, analytics, and diagnostics. PMID:23818328
LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics. PMID:23667450
The MetaboLights repository: curation challenges in metabolomics. PMID:23630246
Shorthand notation for lipid structures derived from mass spectrometry. PMID:23549332
Ozone-induced dissociation of conjugated lipids reveals significant reaction rate enhancements and characteristic odd-electron product ions. PMID:23292977
Automated compound classification using a chemical ontology. PMID:23273256
Trans-fatty acids, dangerous bonds for health? A background review paper of their use, consumption, health implications and regulation in France. PMID:23269652
Lipids in preventive dentistry. PMID:23053698
Template-based combinatorial enumeration of virtual compound libraries for lipids. PMID:23006594
Metabolite profiling of a diverse collection of wheat lines using ultraperformance liquid chromatography coupled with time-of-flight mass spectrometry. PMID:22957002
4,8-Sphingadienine and 4-hydroxy-8-sphingenine activate ceramide production in the skin. PMID:22937840
Mass spectrometry images acylcarnitines, phosphatidylcholines, and sphingomyelin in MDA-MB-231 breast tumor models. PMID:22930811
CardioNet: a human metabolic network suited for the study of cardiomyocyte metabolism. PMID:22929619
Ultra performance liquid chromatography and high resolution mass spectrometry for the analysis of plant lipids. PMID:22629264
Function and Regulation of Lipid Biology in Caenorhabditis elegans Aging. PMID:22629250
Investigation of chronic alcohol consumption in rodents via ultra-high-performance liquid chromatography-mass spectrometry based metabolite profiling. PMID:22446076
Sphingolipid and ceramide homeostasis: potential therapeutic targets. PMID:22400113
Polyunsaturated fatty acids and peripheral artery disease. PMID:22363018
A reversed-phase capillary ultra-performance liquid chromatography-mass spectrometry (UPLC-MS) method for comprehensive top-down/bottom-up lipid profiling. PMID:22354571
Quantitative analysis of the lipidomes of the influenza virus envelope and MDCK cell apical membrane. PMID:22249292
Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics--database and tools update. PMID:22080512
The human plasma lipidome. PMID:22070478
Localization of fatty acyl and double bond positions in phosphatidylcholines using a dual stage CID fragmentation coupled with ion mobility mass spectrometry. PMID:21953258
Bioinformatics and systems biology of the lipidome. PMID:21939287
Phytoceramide and sphingoid bases derived from brewer's yeast Saccharomyces pastorianus activate peroxisome proliferator-activated receptors. PMID:21861924
Anacetrapib promotes reverse cholesterol transport and bulk cholesterol excretion in Syrian golden hamsters. PMID:21841206
ApoB siRNA-induced liver steatosis is resistant to clearance by the loss of fatty acid transport protein 5 (Fatp5). PMID:21826528
High sensitivity quantitative lipidomics analysis of fatty acids in biological samples by gas chromatography-mass spectrometry. PMID:21787881
Lipid analysis and lipidomics by structurally selective ion mobility-mass spectrometry. PMID:21708282
Lipid classification, structures and tools. PMID:21704189
A mathematical model for the determination of steady-state cardiolipin remodeling mechanisms using lipidomic data. PMID:21695174
Applications of mass spectrometry to lipids and membranes. PMID:21469951
Lipidomic analyses of Mycobacterium tuberculosis based on accurate mass measurements and the novel "Mtb LipidDB". PMID:21285232
A simple desalting method for direct MALDI mass spectrometry profiling of tissue lipids. PMID:21266365
Development of stereotactic mass spectrometry for brain tumor surgery. PMID:21135749
Analytical approaches to metabolomics and applications to systems biology. PMID:21044761
Mass-spectrometry based oxidative lipidomics and lipid imaging: applications in traumatic brain injury. PMID:20950335
A mouse macrophage lipidome. PMID:20923771
Ozone-induced dissociation on a modified tandem linear ion-trap: observations of different reactivity for isomeric lipids. PMID:20869881
Solution structure and function of YndB, an AHSA1 protein from Bacillus subtilis. PMID:20818668
Lipidomics reveals a remarkable diversity of lipids in human plasma. PMID:20671299
Lipidomics joins the omics evolution. PMID:19211786
Founding, early history, and transformation of the Journal for Lipid Research to an American Society of Biochemistry and Molecular Biology journal. PMID:19116414
LMSD: LIPID MAPS structure database PubMed citations: 370.

370 articles citing: LMSD: LIPID MAPS structure database

A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics. PMID:35888710
DES-Amyloidoses "Amyloidoses through the looking-glass": A knowledgebase developed for exploring and linking information related to human amyloid-related diseases. PMID:35877764
LipidClock: A Lipid-Based Predictor of Biological Age. PMID:35821819
Cholesterol Alters the Phase Separation in Model Membranes Containing hBest1. PMID:35807512
Outtakes from My Journey through the World of LIPID MAPS. PMID:35745008
The Hard Choice about Dry Pet Food: Comparison of Protein and Lipid Nutritional Qualities and Digestibility of Three Different Chicken-Based Formulations. PMID:35739874
Current State of Fluid Lipid Biomarkers for Personalized Diagnostics and Therapeutics in Schizophrenia Spectrum Disorders and Related Psychoses: A Narrative Review. PMID:35711577
Bioactive lipid screening during respiratory tract infections with bacterial and viral pathogens in mice. PMID:35687250
Unravelling hierarchical levels of structure in lipid membranes. PMID:35685357
High-throughput metabolomics reveals dysregulation of hydrophobic metabolomes in cancer cell lines by Eleusine indica. PMID:35668092
Archeochemistry reveals the first steps into modern industrial brewing. PMID:35661112
A High Throughput Lipidomics Method Using Scheduled Multiple Reaction Monitoring. PMID:35625636
FT-ICR Mass Spectrometry Imaging at Extreme Mass Resolving Power Using a Dynamically Harmonized ICR Cell with 1ω or 2ω Detection. PMID:35604839
Self-Adhesive and Antioxidant Poly(vinylpyrrolidone)/Alginate-Based Bilayer Films Loaded with Malva sylvestris Extracts as Potential Skin Dressings. PMID:35583459
Improving confidence in lipidomic annotations by incorporating empirical ion mobility regression analysis and chemical class prediction. PMID:35561172
MALDI mass spectrometry imaging workflow for the aquatic model organisms Danio rerio and Daphnia magna. PMID:35508492
Lipid Alterations in Early-Stage High-Grade Serous Ovarian Cancer. PMID:35495636
Listeria monocytogenes exposed to antimicrobial peptides displays differential regulation of lipids and proteins associated to stress response. PMID:35482131
The SARS-CoV2 envelope differs from host cells, exposes procoagulant lipids, and is disrupted in vivo by oral rinses. PMID:35436499
Mass recalibration for desorption electrospray ionization mass spectrometry imaging using endogenous reference ions. PMID:35428194
Multiomics implicate gut microbiota in altered lipid and energy metabolism in Parkinson's disease. PMID:35411052
Goslin 2.0 Implements the Recent Lipid Shorthand Nomenclature for MS-Derived Lipid Structures. PMID:35404045
Long-chain ceramides are cell non-autonomous signals linking lipotoxicity to endoplasmic reticulum stress in skeletal muscle. PMID:35365625
Intermittent prednisone treatment in mice promotes exercise tolerance in obesity through adiponectin. PMID:35363257
Elucidating the molecular landscape of the stratum corneum. PMID:35298332
DIAMetAlyzer allows automated false-discovery rate-controlled analysis for data-independent acquisition in metabolomics. PMID:35292629
Plasma proteomic and metabolomic characterization of COVID-19 survivors 6 months after discharge. PMID:35288537
Lysophosphatidylethanolamine Affects Lipid Accumulation and Metabolism in a Human Liver-Derived Cell Line. PMID:35276938
Analysis and Comparison of Mouse and Human Brain Gangliosides via Two-Stage Matching of MS/MS Spectra. PMID:35224401
Identification of a novel cationic glycolipid in Streptococcus agalactiae that contributes to brain entry and meningitis. PMID:35180210
Enzymatic Synthesis of Human Milk Fat Substitute - A Review on Technological Approaches. PMID:35136372
A clinician's guide to omics resources in dermatology. PMID:35104371
SALDI-MS and SERS Multimodal Imaging: One Nanostructured Substrate to Rule Them Both. PMID:35102738
The immunotoxicity, but not anti-tumor efficacy, of anti-CD40 and anti-CD137 immunotherapies is dependent on the gut microbiota. PMID:35028606
Maternal diet-induced obesity during pregnancy alters lipid supply to mouse E18.5 fetuses and changes the cardiac tissue lipidome in a sex-dependent manner. PMID:35025731
Effects of changing from a diet with saturated fat to a diet with n-6 polyunsaturated fat on the serum metabolome in relation to cardiovascular disease risk factors. PMID:34999928
The foundations and development of lipidomics. PMID:34953866
Ceramide Transfer Protein (CERT): An Overlooked Molecular Player in Cancer. PMID:34947980
A reversed phase ultra-high-performance liquid chromatography-data independent mass spectrometry method for the rapid identification of mycobacterial lipids. PMID:34929571
Gas-Phase Ion-Ion Reactions for Lipid Identification in Biological Tissue Sections. PMID:34902137
High-Quality Genome-Scale Reconstruction of Corynebacterium glutamicum ATCC 13032. PMID:34867870
Identification of potential endometriosis biomarkers in peritoneal fluid and blood plasma via shotgun lipidomics. PMID:34841082
PALP: A rapid imaging technique for stratifying ferroptosis sensitivity in normal and tumor tissues in situ. PMID:34813762
A Single Human-Relevant Fast Food Meal Rapidly Reorganizes Metabolomic and Transcriptomic Signatures in a Gut Microbiota-Dependent Manner. PMID:34804604
Multivariate classification techniques and mass spectrometry as a tool in the screening of patients with fibromyalgia. PMID:34799667
Mitochondrial Effects in the Liver of C57BL/6 Mice by Low Dose, High Energy, High Charge Irradiation. PMID:34769236
Classification of target tissues of Eisenia fetida using sequential multimodal chemical analysis and machine learning. PMID:34750664
Metabolomics for Crop Breeding: General Considerations. PMID:34680996
Vitamin D deficiency promotes accumulation of bioactive lipids and increased endocannabinoid tone in zebrafish. PMID:34673019
MS4A15 drives ferroptosis resistance through calcium-restricted lipid remodeling. PMID:34663908
Recommendations for good practice in MS-based lipidomics. PMID:34662536
Mass spectrometry imaging of mice brain lipid profile changes over time under high fat diet. PMID:34608169
Non-Targeted LC-MS Metabolomics Approach towards an Authentication of the Geographical Origin of Grain Maize (Zea mays L.) Samples. PMID:34574275
An Extensive Metabolomics Workflow to Discover Cardiotoxin-Induced Molecular Perturbations in Microtissues. PMID:34564460
Matrix-Free High-Resolution Atmospheric-Pressure SALDI Mass Spectrometry Imaging of Biological Samples Using Nanostructured DIUTHAME Membranes. PMID:34564440
Protocol for multimodal analysis of human kidney tissue by imaging mass spectrometry and CODEX multiplexed immunofluorescence. PMID:34430920
Profiling Analysis of Volatile and Non-volatile Compounds in Vitis Vinifera Berries (cv. Chardonnay) and Spontaneous Bud Mutation. PMID:34422886
Isomer-Resolved Imaging of Prostate Cancer Tissues Reveals Specific Lipid Unsaturation Profiles Associated With Lymphocytes and Abnormal Prostate Epithelia. PMID:34421820
Functions of Sphingolipids in Pathogenesis During Host-Pathogen Interactions. PMID:34408731
Phospholipids: Identification and Implication in Muscle Pathophysiology. PMID:34360941
Long-Term Fluoxetine Administration Causes Substantial Lipidome Alteration of the Juvenile Macaque Brain. PMID:34360852
Untargeted Plasma Metabolomic Profiling in Patients with Major Depressive Disorder Using Ultra-High Performance Liquid Chromatography Coupled with Mass Spectrometry. PMID:34357360
YPIBP: A repository for phosphoinositide-binding proteins in yeast. PMID:34285772
MolDiscovery: learning mass spectrometry fragmentation of small molecules. PMID:34140479
Alterations in lipid profile upon uterine fibroids and its recurrence. PMID:34075062
Aspergillus Metabolome Database for Mass Spectrometry Metabolomics. PMID:34063531
Plant Lipid Databases. PMID:34047992
Inhibitory affinity modulation of FcγRIIA ligand binding by glycosphingolipids by inside-out signaling. PMID:34010642
Targeted Lipidomics of Drosophila melanogaster During Development. PMID:33954948
Mass Spectrometry-Based Lipidomics: An Overview. PMID:33954936
LipidSuite: interactive web server for lipidomics differential and enrichment analysis. PMID:33950258
Quo Vadis Caenorhabditis elegans Metabolomics-A Review of Current Methods and Applications to Explore Metabolism in the Nematode. PMID:33947148
How Does Liquid-Liquid Phase Separation in Model Membranes Reflect Cell Membrane Heterogeneity? PMID:33925240
Streamlined Multimodal DESI and MALDI Mass Spectrometry Imaging on a Singular Dual-Source FT-ICR Mass Spectrometer. PMID:33923908
First Genome-Scale Metabolic Model of Dolosigranulum pigrum Confirms Multiple Auxotrophies. PMID:33918864
Secondary Ion Mass Spectrometry Imaging Reveals Changes in the Lipid Structure of the Plasma Membranes of Hippocampal Neurons following Drugs Affecting Neuronal Activity. PMID:33896172
An Arabidopsis lipid map reveals differences between tissues and dynamic changes throughout development. PMID:33866624
Determination of the size of lipid rafts studied through single-molecule FRET simulations. PMID:33864789
Perspective on Emerging Mass Spectrometry Technologies for Comprehensive Lipid Structural Elucidation. PMID:33856206
Coupling Machine Learning and Lipidomics as a Tool to Investigate Metabolic Dysfunction-Associated Fatty Liver Disease. A General Overview. PMID:33810079
NMR Methods for Determining Lipid Turnover via Stable Isotope Resolved Metabolomics. PMID:33805301
Effects of Low Dose Space Radiation Exposures on the Splenic Metabolome. PMID:33802822
Metabolomics and Lipidomics: Expanding the Molecular Landscape of Exercise Biology. PMID:33799958
Mass Spectrometry-Based Shotgun Lipidomics for Cancer Research. PMID:33791973
Detergent-free Lipodisq Nanoparticles Facilitate High-Resolution Mass Spectrometry of Folded Integral Membrane Proteins. PMID:33787280
Diet and Life Stage-Associated Lipidome Remodeling in Atlantic Salmon. PMID:33754702
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application. PMID:33677548
Metabolomic and elemental profiling of human tissue in kidney cancer. PMID:33661419
Mass shift in mass spectrometry imaging: comprehensive analysis and practical corrective workflow. PMID:33517478
Exploring Metabolic Adaptations to the Acidic Microenvironment of Osteosarcoma Cells Unveils Sphingosine 1-Phosphate as a Valuable Therapeutic Target. PMID:33467731
Creation and filtering of a recurrent spectral library of CHO cell metabolites and media components. PMID:33404064
Functional Characterization of the Lin28/let-7 Circuit During Forelimb Regeneration in Ambystoma mexicanum and Its Influence on Metabolic Reprogramming. PMID:33330447
The Biosynthesis of Enzymatically Oxidized Lipids. PMID:33329396
Exosomes for Wound Healing: Purification Optimization and Identification of Bioactive Components. PMID:33304765
Single-Step Extraction Coupled with Targeted HILIC-MS/MS Approach for Comprehensive Analysis of Human Plasma Lipidome and Polar Metabolome. PMID:33276464
The plasma lipidome of the Quaker parrot (Myiopsitta monachus). PMID:33259543
Multi-omics integration in biomedical research - A metabolomics-centric review. PMID:33248648
Steps Toward Minimal Reporting Standards for Lipidomics Mass Spectrometry in Biomedical Research Publications. PMID:33196315
Design and Characterisation of a Randomized Food Intervention That Mimics Exposure to a Typical UK Diet to Provide Urine Samples for Identification and Validation of Metabolite Biomarkers of Food Intake. PMID:33195362
jMorp updates in 2020: large enhancement of multi-omics data resources on the general Japanese population. PMID:33179747
Changes in transcriptomic and metabolomic profiles of morphotypes of Ophiocordyceps sinensis within the hemocoel of its host larvae, Thitarodes xiaojinensis. PMID:33176684
Vitamin A and D Absorption in Adults with Metabolic Syndrome versus Healthy Controls: A Pilot Study Utilizing Targeted and Untargeted LC-MS Lipidomics. PMID:33167078
Correlation between the Antimicrobial Activity and Metabolic Profiles of Cell Free Supernatants and Membrane Vesicles Produced by Lactobacillus reuteri DSM 17938. PMID:33114410
137Cs γ Ray and 28Si Irradiation Induced Murine Hepatocellular Carcinoma Lipid Changes in Liver Assessed by MALDI-MSI Combined with Spatial Shrunken Centroid Clustering Algorithm: A Pilot Study. PMID:33043195
3D DESI-MS lipid imaging in a xenograft model of glioblastoma: a proof of principle. PMID:33020565
Automated Annotation of Sphingolipids Including Accurate Identification of Hydroxylation Sites Using MSn Data. PMID:33003696
Recent advances in the mass spectrometric analysis of glycosphingolipidome - A review. PMID:32980104
The Lipidome Fingerprint of Longevity. PMID:32971886
Chasing the Major Sphingolipids on Earth: Automated Annotation of Plant Glycosyl Inositol Phospho Ceramides by Glycolipidomics. PMID:32961698
Ecotoxico-lipidomics: An emerging concept to understand chemical-metabolic relationships in comparative fish models. PMID:32956922
Sample preparation of bone tissue for MALDI-MSI for forensic and (pre)clinical applications. PMID:32930817
Decomposing the molecular complexity of brewing. PMID:32885047
Scaling relationships for the elastic moduli and viscosity of mixed lipid membranes. PMID:32883879
Potential Lipid Signatures for Diagnosis and Prognosis of Sepsis and Systemic Inflammatory Response Syndrome. PMID:32882869
Fumonisin B1-Induced Changes in Cotton Fiber Elongation Revealed by Sphingolipidomics and Proteomics. PMID:32878249
Food Phenotyping: Recording and Processing of Non-Targeted Liquid Chromatography Mass Spectrometry Data for Verifying Food Authenticity. PMID:32878155
Regulating Lipid Composition Rationalizes Acyl Tail Saturation Homeostasis in Ectotherms. PMID:32814063
liputils: a Python module to manage individual fatty acid moieties from complex lipids. PMID:32770020
The Lysophosphatidylserines-An Emerging Class of Signalling Lysophospholipids. PMID:32767057
Integrated Datasets of Proteomic and Metabolomic Biomarkers to Predict Its Impacts on Comorbidities of Type 2 Diabetes Mellitus. PMID:32753925
Myc linked to dysregulation of cholesterol transport and storage in nonsmall cell lung cancer. PMID:32753459
Evaluating a targeted multiple reaction monitoring approach to global untargeted lipidomic analyses of human plasma. PMID:32738001
Analytical challenges of shotgun lipidomics at different resolution of measurements. PMID:32713986
A global lipid map defines a network essential for Zika virus replication. PMID:32694525
Adiponectin and related C1q/TNF-related proteins bind selectively to anionic phospholipids and sphingolipids. PMID:32632018
Validation of Breast Cancer Margins by Tissue Spray Mass Spectrometry. PMID:32604966
Longitudinal wastewater sampling in buildings reveals temporal dynamics of metabolites. PMID:32598361
Fast and sensitive flow-injection mass spectrometry metabolomics by analyzing sample-specific ion distributions. PMID:32581242
Machine Learning Applications for Mass Spectrometry-Based Metabolomics. PMID:32545768
Untargeted lipidomics using liquid chromatography-ion mobility-mass spectrometry reveals novel triacylglycerides in human milk. PMID:32518313
Alterations in Tissue Metabolite Profiles with Amifostine-Prophylaxed Mice Exposed to Gamma Radiation. PMID:32455594
LipidCreator workbench to probe the lipidomic landscape. PMID:32345972
DES-ROD: Exploring Literature to Develop New Links between RNA Oxidation and Human Diseases. PMID:32308806
Crystal structures of lysophospholipid-bound MHC class I molecules. PMID:32269076
HIGH RESOLUTION MASS SPECTROMETRY IN LIPIDOMICS. PMID:32233039
Deriving Lipid Classification Based on Molecular Formulas. PMID:32214009
Lipids in Entamoeba histolytica: Host-Dependence and Virulence Factors. PMID:32211340
A Metabolic Insight Into the Neuroprotective Effect of Jin-Mai-Tong (JMT) Decoction on Diabetic Rats With Peripheral Neuropathy Using Untargeted Metabolomics Strategy. PMID:32194428
Wikidata as a knowledge graph for the life sciences. PMID:32180547
A Simple and Effective Sample Preparation Strategy for MALDI-MS Imaging of Neuropeptide Changes in the Crustacean Brain Due to Hypoxia and Hypercapnia Stress. PMID:32150406
Lipidomic profiles, lipid trajectories and clinical biomarkers in female elite endurance athletes. PMID:32047202
Advanced identification of global bioactivity hotspots via screening of the metabolic fingerprint of entire ecosystems. PMID:31992728
Metabolomic and Lipidomic Signatures of Metabolic Syndrome and its Physiological Components in Adults: A Systematic Review. PMID:31959772
Methods of the Analysis of Oxylipins in Biological Samples. PMID:31952163
Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts. PMID:31949144
Principles and Applications of Biological Membrane Organization. PMID:31913664
Evaluation of lipid coverage and high spatial resolution MALDI-imaging capabilities of oversampling combined with laser post-ionisation. PMID:31879798
Emerging Insights into the Metabolic Alterations in Aging Using Metabolomics. PMID:31847272
Transformation of Prostaglandin D2 to 11-Dehydro Thromboxane B2 by Baeyer-Villiger Oxidation. PMID:31833075
Lipidomics from sample preparation to data analysis: a primer. PMID:31820027
Accessible and reproducible mass spectrometry imaging data analysis in Galaxy. PMID:31816088
Differences in lipidome and metabolome organization of prefrontal cortex among human populations. PMID:31797944
Lipid mechanisms in hallmarks of cancer. PMID:31755509
Mass Spectrometry: A Guide for the Clinician. PMID:31695250
Metabolic Profiling and Compound-Class Identification Reveal Alterations in Serum Triglyceride Levels in Mice Immunized with Human Vaccine Adjuvant Alum. PMID:31625748
Hybrid Search: A Method for Identifying Metabolites Absent from Tandem Mass Spectrometry Libraries. PMID:31600070
Comprehensive relationships between gut microbiome and faecal metabolome in individuals with type 2 diabetes and its complications. PMID:31591683
Lymphatic Cannulation for Lymph Sampling and Molecular Delivery. PMID:31519866
LAS: A Lipid Annotation Service Capable of Explaining the Annotations It Generates. PMID:31462967
Elevated Gestational IL-13 During Fetal Development Is Associated With Hyperactivity and Inattention in Eight-Year-Old Children. PMID:31428082
Salivary Metabolomics of Total Body Irradiated Nonhuman Primates Reveals Long-Term Normal Tissue Responses to Radiation. PMID:31352081
Non-targeted metabolomics reveals diagnostic biomarker in the tongue coating of patients with chronic gastritis. PMID:31255854
Literature-Based Enrichment Insights into Redox Control of Vascular Biology. PMID:31223421
Blimp1+ cells generate functional mouse sebaceous gland organoids in vitro. PMID:31138796
A Comprehensive UHPLC Ion Mobility Quadrupole Time-of-Flight Method for Profiling and Quantification of Eicosanoids, Other Oxylipins, and Fatty Acids. PMID:31074960
Addressing the pitfalls when designing intervention studies to discover and validate biomarkers of habitual dietary intake. PMID:31049735
Alterations in the gut microbiome and metabolism with coronary artery disease severity. PMID:31027508
Identification of functional lipid metabolism biomarkers of brown adipose tissue aging. PMID:31003944
Lipid Mini-On: mining and ontology tool for enrichment analysis of lipidomic data. PMID:30977807
Tutorial on lipidomics. PMID:30926037
An Unbiased Lipid Phenotyping Approach To Study the Genetic Determinants of Lipids and Their Association with Coronary Heart Disease Risk Factors. PMID:30887811
Serum lipidomic analysis from mixed neutron/X-ray radiation fields reveals a hyperlipidemic and pro-inflammatory phenotype. PMID:30872747
Host Lipids in Positive-Strand RNA Virus Genome Replication. PMID:30863375
Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance. PMID:30859819
An LC-MS-based lipidomics pre-processing framework underpins rapid hypothesis generation towards CHO systems biotechnology. PMID:30830409
Italian cohort of patients affected by inflammatory bowel disease is characterised by variation in glycerophospholipid, free fatty acids and amino acid levels. PMID:30830399
Detection and Structural Characterization of Ether Glycerophosphoethanolamine from Cortical Lysosomes Following Traumatic Brain Injury Using UPLC-HDMSE. PMID:30790445
Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. PMID:30787451
Mesorhizobium huakuii HtpG Interaction with nsLTP AsE246 Is Required for Symbiotic Nitrogen Fixation. PMID:30765481
Analysis of SMALP co-extracted phospholipids shows distinct membrane environments for three classes of bacterial membrane protein. PMID:30755655
Consistency, Inconsistency, and Ambiguity of Metabolite Names in Biochemical Databases Used for Genome-Scale Metabolic Modelling. PMID:30736318
Imbalanced sphingolipid signaling is maintained as a core proponent of a cancerous phenotype in spite of metabolic pressure and epigenetic drift. PMID:30728898
In plaque-mass spectrometry imaging of a bloom-forming alga during viral infection reveals a metabolic shift towards odd-chain fatty acid lipids. PMID:30718847
The cholesterol biosynthesis pathway regulates IL-10 expression in human Th1 cells. PMID:30700717
The Role of Lipids in Parkinson's Disease. PMID:30621069
Injury to hypothalamic Sim1 neurons is a common feature of obesity by exposure to high-fat diet in male and female mice. PMID:30615192
Elucidation of a Human Urine Metabolite as a Seryl-Leucine Glycopeptide and as a Biomarker of Effective Anti-Tuberculosis Therapy. PMID:30585483
Live single cell mass spectrometry reveals cancer-specific metabolic profiles of circulating tumor cells. PMID:30549153
Class I Phosphoinositide 3-Kinase PIK3CA/p110α and PIK3CB/p110β Isoforms in Endometrial Cancer. PMID:30544563
Defining Changes in the Spatial Distribution and Composition of Brain Lipids in the Shiverer and Cuprizone Mouse Models of Myelin Disease. PMID:30501365
Lipidomics in Major Depressive Disorder. PMID:30374314
The Various Roles of Fatty Acids. PMID:30304860
Lipidomics Reveals a Tissue-Specific Fingerprint. PMID:30210358
Human Milk Lipidomics: Current Techniques and Methodologies. PMID:30149663
Rapid discrimination of pediatric brain tumors by mass spectrometry imaging. PMID:30128689
MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines. PMID:30115755
Global metabolomic responses in urine from atm deficient mice in response to LD50/30 gamma irradiation doses. PMID:30095186
Production and analysis of multiply charged negative ions by liquid atmospheric pressure matrix-assisted laser desorption/ionization mass spectrometry. PMID:30067883
Lipidomics Suggests a New Role for Ceramide Synthase in Phagocytosis. PMID:29963848
Analysis of human C24 bile acids metabolome in serum and urine based on enzyme digestion of conjugated bile acids and LC-MS determination of unconjugated bile acids. PMID:29907951
Liver metabolomics in a mouse model of erythropoietic protoporphyria. PMID:29906468
Tocotrienol-Rich Fraction of Palm Oil Improves Behavioral Impairments and Regulates Metabolic Pathways in AβPP/PS1 Mice. PMID:29889072
A window into extreme longevity; the circulating metabolomic signature of the naked mole-rat, a mammal that shows negligible senescence. PMID:29679203
Propagating annotations of molecular networks using in silico fragmentation. PMID:29668671
LipidPedia: a comprehensive lipid knowledgebase. PMID:29648583
KniMet: a pipeline for the processing of chromatography-mass spectrometry metabolomics data. PMID:29576760
Allostery revealed within lipid binding events to membrane proteins. PMID:29507234
Optic Nerve Regeneration After Crush Remodels the Injury Site: Molecular Insights From Imaging Mass Spectrometry. PMID:29340649
Lipidomics of Thalassiosira pseudonana under Phosphorus Stress Reveal Underlying Phospholipid Substitution Dynamics and Novel Diglycosylceramide Substitutes. PMID:29305510
Metabolomics technology and bioinformatics for precision medicine. PMID:29304189
Evaluation and comparison of bioinformatic tools for the enrichment analysis of metabolomics data. PMID:29291722
Annotation of Peptide Structures Using SMILES and Other Chemical Codes-Practical Solutions. PMID:29186902
Dietary and Endogenous Sphingolipid Metabolism in Chronic Inflammation. PMID:29143791
HMDB 4.0: the human metabolome database for 2018. PMID:29140435
Deciphering lipid codes: K-Ras as a paradigm. PMID:29120102
Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D. PMID:29086112
Deciphering lipid structures based on platform-independent decision rules. PMID:29058722
Lipidomics profiling reveals the role of glycerophospholipid metabolism in psoriasis. PMID:29046044
Avocado fruit maturation and ripening: dynamics of aliphatic acetogenins and lipidomic profiles from mesocarp, idioblasts and seed. PMID:28969589
In Utero Exposure to Histological Chorioamnionitis Primes the Exometabolomic Profiles of Preterm CD4+ T Lymphocytes. PMID:28947540
Large-scale Metabolomic Analysis Reveals Potential Biomarkers for Early Stage Coronary Atherosclerosis. PMID:28924163
Navigating freely-available software tools for metabolomics analysis. PMID:28890673
Exogenous Polyunsaturated Fatty Acids Impact Membrane Remodeling and Affect Virulence Phenotypes among Pathogenic Vibrio Species. PMID:28864654
Application of sebomics for the analysis of residual skin surface components to detect potential biomarkers of type-1 diabetes mellitus. PMID:28827705
A Serum Small Molecule Biosignature of Radiation Exposure from Total Body Irradiated Patients. PMID:28825479
Ambient mass spectrometry in metabolomics. PMID:28792022
Neuronal Cholesterol Accumulation Induced by Cyp46a1 Down-Regulation in Mouse Hippocampus Disrupts Brain Lipid Homeostasis. PMID:28744197
Investigating glycemic potential of rice by unraveling compositional variations in mature grain and starch mobilization patterns during seed germination. PMID:28724910
The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization. PMID:28691704
Enriching plausible new hypothesis generation in PubMed. PMID:28678852
A methodology for elucidating regulatory mechanisms leading to changes in lipid profiles. PMID:28596719
Endometriosis foci differentiation by rapid lipid profiling using tissue spray ionization and high resolution mass spectrometry. PMID:28566741
From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics. PMID:28520864
Metabolic Dysregulation after Neutron Exposures Expected from an Improvised Nuclear Device. PMID:28475424
Lipidomics: Prospects from a technological perspective. PMID:28341148
metaX: a flexible and comprehensive software for processing metabolomics data. PMID:28327092
LipidFrag: Improving reliability of in silico fragmentation of lipids and application to the Caenorhabditis elegans lipidome. PMID:28278196
Expanding Lipidome Coverage Using LC-MS/MS Data-Dependent Acquisition with Automated Exclusion List Generation. PMID:28265968
Common cases of improper lipid annotation using high-resolution tandem mass spectrometry data and corresponding limitations in biological interpretation. PMID:28263877
DAPNe with micro-capillary separatory chemistry-coupled to MALDI-MS for the analysis of polar and non-polar lipid metabolism in one cell. PMID:28251574
compMS2Miner: An Automatable Metabolite Identification, Visualization, and Data-Sharing R Package for High-Resolution LC-MS Data Sets. PMID:28225587
The genome of Chenopodium quinoa. PMID:28178233
LIQUID: an-open source software for identifying lipids in LC-MS/MS-based lipidomics data. PMID:28158427
Ultra high performance liquid chromatography-high resolution mass spectrometry plasma lipidomics can distinguish between canine breeds despite uncontrolled environmental variability and non-standardized diets. PMID:28111530
LipidPioneer : A Comprehensive User-Generated Exact Mass Template for Lipidomics. PMID:28074328
Mass spectrometry imaging: a novel technology in rheumatology. PMID:27881864
Lipid profiling of polarized human monocyte-derived macrophages. PMID:27871801
Lipid zonation and phospholipid remodeling in nonalcoholic fatty liver disease. PMID:27863448
Lipidomics-Reshaping the Analysis and Perception of Type 2 Diabetes. PMID:27827927
Prediction, Detection, and Validation of Isotope Clusters in Mass Spectrometry Data. PMID:27775610
Metabolomic profiling of breast tumors using ductal fluid. PMID:27748798
Differential human urinary lipid profiles using various lipid-extraction protocols: MALDI-TOF and LIFT-TOF/TOF analyses. PMID:27646409
Quantitative metabolomics of photoreceptor degeneration and the effects of stem cell-derived retinal pigment epithelium transplantation. PMID:27644974
Distinct mechanisms underlying cholesterol protection against alcohol-induced BK channel inhibition and resulting vasoconstriction. PMID:27565113
On the cellular metabolism of the click chemistry probe 19-alkyne arachidonic acid. PMID:27538823
Tissue damage drives co-localization of NF-κB, Smad3, and Nrf2 to direct Rev-erb sensitive wound repair in mouse macrophages. PMID:27462873
Metabolic Profiles of Obesity in American Indians: The Strong Heart Family Study. PMID:27434237
Cytochrome P450 metabolism of the post-lanosterol intermediates explains enigmas of cholesterol synthesis. PMID:27334049
Glycosphingolipids of human embryonic stem cells. PMID:27325407
Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation. PMID:27239563
Applications of Fourier Transform Ion Cyclotron Resonance (FT-ICR) and Orbitrap Based High Resolution Mass Spectrometry in Metabolomics and Lipidomics. PMID:27231903
Structure of faustovirus, a large dsDNA virus. PMID:27185929
Mapping the Human Platelet Lipidome Reveals Cytosolic Phospholipase A2 as a Regulator of Mitochondrial Bioenergetics during Activation. PMID:27133131
Use of lipidomics to investigate sebum dysfunction in juvenile acne. PMID:27127078
MBROLE 2.0-functional enrichment of chemical compounds. PMID:27084944
Whole-body Mass Spectrometry Imaging by Infrared Matrix-assisted Laser Desorption Electrospray Ionization (IR-MALDESI). PMID:27077488
Implementation of a methodology for determining elastic properties of lipid assemblies from molecular dynamics simulations. PMID:27071656
Characterisation of the main drivers of intra- and inter- breed variability in the plasma metabolome of dogs. PMID:27065761
Bioprospecting of Marine Macrophytes Using MS-Based Lipidomics as a New Approach. PMID:27005634
Enabling Metabolomics Based Biomarker Discovery Studies Using Molecular Phenotyping of Exosome-Like Vesicles. PMID:26974972
Phosphatidylethanolamine Metabolism in Health and Disease. PMID:26811286
Identification of mumps virus protein and lipid composition by mass spectrometry. PMID:26768080
Novel advances in shotgun lipidomics for biology and medicine. PMID:26703190
Analysis of Antiretrovirals in Single Hair Strands for Evaluation of Drug Adherence with Infrared-Matrix-Assisted Laser Desorption Electrospray Ionization Mass Spectrometry Imaging. PMID:26688545
Peripheral Circadian Clocks Mediate Dietary Restriction-Dependent Changes in Lifespan and Fat Metabolism in Drosophila. PMID:26626459
Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome. PMID:26623545
Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools. PMID:26467476
Templated polymers enable selective capture and release of lysophosphatidic acid in human plasma via optimization of non-covalent binding to functional monomers. PMID:26455441
Thermal Degradation of Small Molecules: A Global Metabolomic Investigation. PMID:26434689
Influence of C-Trap Ion Accumulation Time on the Detectability of Analytes in IR-MALDESI MSI. PMID:26414177
Polarity switching mass spectrometry imaging of healthy and cancerous hen ovarian tissue sections by infrared matrix-assisted laser desorption electrospray ionization (IR-MALDESI). PMID:26402586
The LUX Score: A Metric for Lipidome Homology. PMID:26393792
Human metabolic atlas: an online resource for human metabolism. PMID:26209309
Regulation of mitochondrial ceramide distribution by members of the BCL-2 family. PMID:26059977
SpeckTackle: JavaScript charts for spectroscopy. PMID:25984241
Implementation of linked data in the life sciences at BioHackathon 2011. PMID:25973165
Marginally hydrophobic transmembrane α-helices shaping membrane protein folding. PMID:25970811
The SwissLipids knowledgebase for lipid biology. PMID:25943471
MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis. PMID:25938372
Influence of Desorption Conditions on Analyte Sensitivity and Internal Energy in Discrete Tissue or Whole Body Imaging by IR-MALDESI. PMID:25840812
Differential network analysis with multiply imputed lipidomic data. PMID:25822937
A nonapoptotic role for BAX and BAK in eicosanoid metabolism. PMID:25815636
Analytical methods in untargeted metabolomics: state of the art in 2015. PMID:25798438
Targeting of the hydrophobic metabolome by pathogens. PMID:25754025
Metabolomics and diabetes: analytical and computational approaches. PMID:25713200
Untargeted metabolic profiling identifies interactions between Huntington's disease and neuronal manganese status. PMID:25599126
Novel metabolic markers for the risk of diabetes development in American Indians. PMID:25468946
Metabolic consequences of interleukin-6 challenge in developing neurons and astroglia. PMID:25374324
Discovery of a class of endogenous mammalian lipids with anti-diabetic and anti-inflammatory effects. PMID:25303528
Silver dopants for targeted and untargeted direct analysis of unsaturated lipids via infrared matrix-assisted laser desorption electrospray ionization (IR-MALDESI). PMID:25303475
A fluorescence-activated cell sorting-based strategy for rapid isolation of high-lipid Chlamydomonas mutants. PMID:25267488
Study of leaf metabolome modifications induced by UV-C radiations in representative Vitis, Cissus and Cannabis species by LC-MS based metabolomics and antioxidant assays. PMID:25197936
A review of applications of metabolomics in cancer. PMID:24958139
Fosmidomycin decreases membrane hopanoids and potentiates the effects of colistin on Burkholderia multivorans clinical isolates. PMID:24957830
Metabolomics and proteomics reveal impacts of chemically mediated competition on marine plankton. PMID:24889616
Phenotypic mapping of metabolic profiles using self-organizing maps of high-dimensional mass spectrometry data. PMID:24856386
Benznidazole biotransformation and multiple targets in Trypanosoma cruzi revealed by metabolomics. PMID:24853684
After the feature presentation: technologies bridging untargeted metabolomics and biology. PMID:24816495
Mass spectrometry of natural products: current, emerging and future technologies. PMID:24801551
Metabolic profiles of biological aging in American Indians: the Strong Heart Family Study. PMID:24799415
LIPID MAPS-Nature Lipidomics Gateway: An Online Resource for Students and Educators Interested in Lipids. PMID:24764601
Radiation-induced changes in serum lipidome of head and neck cancer patients. PMID:24747595
A rough guide to metabolite identification using high resolution liquid chromatography mass spectrometry in metabolomic profiling in metazoans. PMID:24688687
The intestinal metabolome: an intersection between microbiota and host. PMID:24631493
Comparative evaluation of open source software for mapping between metabolite identifiers in metabolic network reconstructions: application to Recon 2. PMID:24468196
Gangliosides as a potential new class of stem cell markers: the case of GD1a in human bone marrow mesenchymal stem cells. PMID:24449473
Conformational ordering of biomolecules in the gas phase: nitrogen collision cross sections measured on a prototype high resolution drift tube ion mobility-mass spectrometer. PMID:24446877
Towards lipidomics of low-abundant species for exploring tumor heterogeneity guided by high-resolution mass spectrometry imaging. PMID:24351834
MetaboLyzer: a novel statistical workflow for analyzing Postprocessed LC-MS metabolomics data. PMID:24266674
Simple enrichment and analysis of plasma lysophosphatidic acids. PMID:24067566
Molecular networking as a dereplication strategy. PMID:24025162
In silico enzymatic synthesis of a 400,000 compound biochemical database for nontargeted metabolomics. PMID:23991755
LipidBlast in silico tandem mass spectrometry database for lipid identification. PMID:23817071
LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics. PMID:23667450
Bioanalysis of eukaryotic organelles. PMID:23570618
MSiReader: an open-source interface to view and analyze high resolving power MS imaging files on Matlab platform. PMID:23536269
Sum of the parts: mass spectrometry-based metabolomics. PMID:23442130
Prioritization of putative metabolite identifications in LC-MS/MS experiments using a computational pipeline. PMID:23307777
The yeast eukaryotic translation initiation factor 2B translation initiation complex interacts with the fatty acid synthesis enzyme YBR159W and endoplasmic reticulum membranes. PMID:23263984
Infrared matrix-assisted laser desorption electrospray ionization (IR-MALDESI) imaging source coupled to a FT-ICR mass spectrometer. PMID:23208743
Reconciliation of metabolites and biochemical reactions for metabolic networks. PMID:23172809
MetaboLights--an open-access general-purpose repository for metabolomics studies and associated meta-data. PMID:23109552
Knockdown of FIBRILLIN4 gene expression in apple decreases plastoglobule plastoquinone content. PMID:23077632
Template-based combinatorial enumeration of virtual compound libraries for lipids. PMID:23006594
An accelerated workflow for untargeted metabolomics using the METLIN database. PMID:22965049
MassTRIX reloaded: combined analysis and visualization of transcriptome and metabolome data. PMID:22815716
MetaboSearch: tool for mass-based metabolite identification using multiple databases. PMID:22768229
Time to face the fats: what can mass spectrometry reveal about the structure of lipids and their interactions with proteins? PMID:22669763
Qualitative analysis of algal secretions with multiple mass spectrometric platforms. PMID:22608776
MarVis-Filter: ranking, filtering, adduct and isotope correction of mass spectrometry data. PMID:22550397
Cardiolipin synthase is required for Streptomyces coelicolor morphogenesis. PMID:22409773
Bioinformatics and systems biology of the lipidome. PMID:21939287
Multi-dimensional mass spectrometry-based shotgun lipidomics and novel strategies for lipidomic analyses. PMID:21755525
Lipid analysis and lipidomics by structurally selective ion mobility-mass spectrometry. PMID:21708282
Lipid classification, structures and tools. PMID:21704189
Quantitative analysis of glycerophospholipids by LC-MS: acquisition, data handling, and interpretation. PMID:21683157
Lipidomics at the interface of structure and function in systems biology. PMID:21439472
Mining to find the lipid interaction networks involved in Ovarian Cancers. PMID:21347172
Essential metabolites of Mycobacterium tuberculosis and their mimics. PMID:21285434
Development of stereotactic mass spectrometry for brain tumor surgery. PMID:21135749
Computational databases, pathway and cheminformatics tools for tuberculosis drug discovery. PMID:21129975
Visualization of lipid droplet composition by direct organelle mass spectrometry. PMID:21118810
Metabolic Profiling of Human Blood by High Resolution Ion Mobility Mass Spectrometry (IM-MS). PMID:21113320
metaP-server: a web-based metabolomics data analysis tool. PMID:20936179
Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis. PMID:20426876
Oxidation of the endogenous cannabinoid arachidonoyl ethanolamide by the cytochrome P450 monooxygenases: physiological and pharmacological implications. PMID:20133390
The role of mass spectrometry-based metabolomics in medical countermeasures against radiation. PMID:19890938
An editor for pathway drawing and data visualization in the Biopathways Workbench. PMID:19799790
Metabolite signal identification in accurate mass metabolomics data with MZedDB, an interactive m/z annotation tool utilising predicted ionisation behaviour 'rules'. PMID:19622150
Database resources in metabolomics: an overview. PMID:19418229
Characterizing ion mobility-mass spectrometry conformation space for the analysis of complex biological samples. PMID:19247641
Molecular formula and METLIN Personal Metabolite Database matching applied to the identification of compounds generated by LC/TOF-MS. PMID:19137116
Update of the LIPID MAPS comprehensive classification system for lipids. PMID:19098281
Identification of phosphatidylserylglutamate: a novel minor lipid in Escherichia coli. PMID:19096047
Towards high-throughput metabolomics using ultrahigh-field Fourier transform ion cyclotron resonance mass spectrometry. PMID:19081807
A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. PMID:18846089
Towards ontology-driven navigation of the lipid bibliosphere. PMID:18315858
Membrane lipids: where they are and how they behave. PMID:18216768
ChEBI: a database and ontology for chemical entities of biological interest. PMID:17932057
LIPID MAPS online tools for lipid research. PMID:17584797
LIPID MAPS online tools for lipid research PubMed citations: 286.

286 articles citing: LIPID MAPS online tools for lipid research

A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics. PMID:35888710
Targeting de novo lipogenesis and the Lands cycle induces ferroptosis in KRAS-mutant lung cancer. PMID:35882862
Dynamic Progress in Technological Advances to Study Lipids in Aging: Challenges and Future Directions. PMID:35821837
Suitability of Dried Blood Spots for Accelerating Veterinary Biobank Collections and Identifying Metabolomics Biomarkers With Minimal Resources. PMID:35812865
Shotgun Lipidomics for Differential Diagnosis of HPV-Associated Cervix Transformation. PMID:35736434
Single-Cell Metabolic Profiling of Macrophages Using 3D OrbiSIMS: Correlations with Phenotype. PMID:35713879
Altered Lipid Profile in COVID-19 Patients and Metabolic Reprogramming. PMID:35633693
FT-ICR Mass Spectrometry Imaging at Extreme Mass Resolving Power Using a Dynamically Harmonized ICR Cell with 1ω or 2ω Detection. PMID:35604839
IDSL.IPA Characterizes the Organic Chemical Space in Untargeted LC/HRMS Data Sets. PMID:35579321
Mass Spectrometry Imaging for Spatial Chemical Profiling of Vegetative Parts of Plants. PMID:35567235
Space- and Time-Resolved Metabolomics of a High-Grade Serous Ovarian Cancer Mouse Model. PMID:35565391
Precision diagnostic approach to predict 5-year risk for microvascular complications in type 1 diabetes. PMID:35533498
Modified lipid metabolism and cytosolic phospholipase A2 activation in mesangial cells under pro-inflammatory conditions. PMID:35513427
Prediction of pregnancy-related hypertensive disorders using metabolomics: a systematic review. PMID:35470187
Oogenesis and lipid metabolism in the deep-sea sponge Phakellia ventilabrum (Linnaeus, 1767). PMID:35428825
Triacylglycerols and Other Lipids Profiling of Hemp By-Products. PMID:35408737
Finding Correspondence between Metabolomic Features in Untargeted Liquid Chromatography-Mass Spectrometry Metabolomics Datasets. PMID:35360896
Enhancing the Throughput of FT Mass Spectrometry Imaging Using Joint Compressed Sensing and Subspace Modeling. PMID:35324161
Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding. PMID:35294859
Anti-inflammatory and anti-viral actions of anionic pulmonary surfactant phospholipids. PMID:35240310
SDHB knockout and succinate accumulation are insufficient for tumorigenesis but dual SDHB/NF1 loss yields SDHx-like pheochromocytomas. PMID:35235785
Lipidome Alterations following Mild Traumatic Brain Injury in the Rat. PMID:35208224
Chronic Jetlag Alters the Landscape of the Pancreatic Lipidome. PMID:35195599
Automated Annotation of Untargeted All-Ion Fragmentation LC-MS Metabolomics Data with MetaboAnnotatoR. PMID:35180347
Signaling Lipidomic Analysis of Thermogenic Adipocytes. PMID:35167102
Lipidomics Analysis of Outer Membrane Vesicles and Elucidation of the Inositol Phosphoceramide Biosynthetic Pathway in Bacteroides thetaiotaomicron. PMID:35080445
Spatial visualization of drug uptake and distribution in Fasciola hepatica using high-resolution AP-SMALDI mass spectrometry imaging. PMID:35067744
Plasma metabolomics of autism spectrum disorder and influence of shared components in proband families. PMID:35028569
Identification of Lipid Heterogeneity and Diversity in the Developing Human Brain. PMID:34977897
Ceramide Transfer Protein (CERT): An Overlooked Molecular Player in Cancer. PMID:34947980
Enhanced hepatic respiratory capacity and altered lipid metabolism support metabolic homeostasis during short-term hypoxic stress. PMID:34911556
MCF-7 Drug Resistant Cell Lines Switch Their Lipid Metabolism to Triple Negative Breast Cancer Signature. PMID:34884983
Identification of potential endometriosis biomarkers in peritoneal fluid and blood plasma via shotgun lipidomics. PMID:34841082
Loss of Corpus-Specific Lipids in Helicobacter pylori-Induced Atrophic Gastritis. PMID:34817238
Unveiling microbial preservation under hyperacidic and oxidizing conditions in the Oligocene Rio Tinto deposit. PMID:34728655
HERMES: a molecular-formula-oriented method to target the metabolome. PMID:34725482
SARS-CoV2 Infection Alters Tryptophan Catabolism and Phospholipid Metabolism. PMID:34677374
Spatial metabolomics identifies localized chemical changes in heart tissue during chronic cardiac Chagas Disease. PMID:34606502
A Catalog of Natural Products Occurring in Watermelon-Citrullus lanatus. PMID:34595201
A Role for Inositol Pyrophosphates in the Metabolic Adaptations to Low Phosphate in Arabidopsis. PMID:34564416
Comparison of High-Resolution Fourier Transform Mass Spectrometry Platforms for Putative Metabolite Annotation. PMID:34460220
Comprehensive polar metabolomics and lipidomics profiling discriminates the transformed from the non-transformed state in colon tissue and cell lines. PMID:34446738
Preservation of Underground Microbial Diversity in Ancient Subsurface Deposits (>6 Ma) of the Rio Tinto Basement. PMID:34442671
Epithelial Cell Line Derived from Endometriotic Lesion Mimics Macrophage Nervous Mechanism of Pain Generation on Proteome and Metabolome Levels. PMID:34439896
Metabolomics for personalized medicine: the input of analytical chemistry from biomarker discovery to point-of-care tests. PMID:34432105
Protocol for multimodal analysis of human kidney tissue by imaging mass spectrometry and CODEX multiplexed immunofluorescence. PMID:34430920
Ten simple rules for creating reusable pathway models for computational analysis and visualization. PMID:34411100
Comprehensive analysis of glycosphingolipid glycans by lectin microarrays and MALDI-TOF mass spectrometry. PMID:34099941
Hepatic lipid signatures of little brown bats (Myotis lucifugus) and big brown bats (Eptesicus fuscus) at early stages of white-nose syndrome. PMID:34078939
Dysregulation of Glycerophosphocholines in the Cutaneous Lesion Caused by Leishmania major in Experimental Murine Models. PMID:34068119
The role of lipids in exosome biology and intercellular communication: Function, analytics and applications. PMID:34053166
In Situ Localization of Plant Lipid Metabolites by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging (MALDI-MSI). PMID:34047991
Toxoplasma gondii serine hydrolases regulate parasite lipid mobilization during growth and replication within the host. PMID:34043961
TOMATOMET: A metabolome database consists of 7118 accurate mass values detected in mature fruits of 25 tomato cultivars. PMID:33969254
A circular network of coregulated sphingolipids dictates lung cancer growth and progression. PMID:33813137
High-resolution AP-SMALDI MSI as a tool for drug imaging in Schistosoma mansoni. PMID:33723627
Metabolomic and elemental profiling of human tissue in kidney cancer. PMID:33661419
Comprehensive Evaluation of Metabolites and Minerals in 6 Microgreen Species and the Influence of Maturity. PMID:33644632
Role of Sphingosine Kinase in Type 2 Diabetes Mellitus. PMID:33633691
Lipid profiling of mouse intestinal organoids for studying APC mutations. PMID:33620068
Shotgun lipidomics and mass spectrometry imaging unveil diversity and dynamics in Gammarus fossarum lipid composition. PMID:33615205
Repurposing the orphan drug nitisinone to control the transmission of African trypanosomiasis. PMID:33497373
Eicosanoid Content in Fetal Calf Serum Accounts for Reproducibility Challenges in Cell Culture. PMID:33467719
Linking Gut Microbiome and Lipid Metabolism: Moving beyond Associations. PMID:33467644
Human Plasma Metabolomics for Biomarker Discovery: Targeting the Molecular Subtypes in Breast Cancer. PMID:33466323
Volumetric Absorptive Microsampling of Blood for Untargeted Lipidomics. PMID:33430231
Targeting Kinases in Fasciola hepatica: Anthelminthic Effects and Tissue Distribution of Selected Kinase Inhibitors. PMID:33409299
Glycerophospholipid and detoxification pathways associated with small for gestation age pathophysiology: discovery metabolomics analysis in the SCOPE cohort. PMID:33398476
Three-dimensional (3D) imaging of lipids in skin tissues with infrared matrix-assisted laser desorption electrospray ionization (MALDESI) mass spectrometry. PMID:33388847
Metabolome-wide association study of flavorant vanillin exposure in bronchial epithelial cells reveals disease-related perturbations in metabolism. PMID:33360165
Comparative Analysis of Milk Triglycerides Profile between Jaffarabadi Buffalo and Holstein Friesian Cow. PMID:33322613
Metabolic Signatures of Gestational Weight Gain and Postpartum Weight Loss in a Lifestyle Intervention Study of Overweight and Obese Women. PMID:33291639
The effects of amino acids and fatty acids on the disease resistance of Epinephelus fuscoguttatus in response to Vibrio vulnificus infection. PMID:33240745
Changes in transcriptomic and metabolomic profiles of morphotypes of Ophiocordyceps sinensis within the hemocoel of its host larvae, Thitarodes xiaojinensis. PMID:33176684
Circulating Metabolites as Potential Biomarkers for Neurological Disorders-Metabolites in Neurological Disorders. PMID:33003305
A Stearoyl-Coenzyme A Desaturase Inhibitor Prevents Multiple Parkinson Disease Phenotypes in α-Synuclein Mice. PMID:32996158
Ecotoxico-lipidomics: An emerging concept to understand chemical-metabolic relationships in comparative fish models. PMID:32956922
Lipidomic UPLC-MS/MS Profiles of Normal-Appearing White Matter Differentiate Primary and Secondary Progressive Multiple Sclerosis. PMID:32911763
Hepatic Lipidomics and Molecular Imaging in a Murine Non-Alcoholic Fatty Liver Disease Model: Insights into Molecular Mechanisms. PMID:32899418
Differentiation and Quantification of Diastereomeric Pairs of Glycosphingolipids Using Gas-Phase Ion Chemistry. PMID:32883073
Lipidome signatures of metastasis in a transgenic mouse model of sonic hedgehog medulloblastoma. PMID:32794007
The Lysophosphatidylserines-An Emerging Class of Signalling Lysophospholipids. PMID:32767057
Alterations of Lipid Metabolism With Age and Weight in Companion Dogs. PMID:32750116
Cell wall glycolipids from Corynebacterium pseudotuberculosis strains with different virulences differ in terms of composition and immune recognition. PMID:32712830
Antigen Retrieval and Its Effect on the MALDI-MSI of Lipids in Formalin-Fixed Paraffin-Embedded Tissue. PMID:32678590
Distinctive lipid signatures of bronchial epithelial cells associated with cystic fibrosis drugs, including Trikafta. PMID:32673287
Association Between Circulating Lipids and Future Weight Gain in Individuals With an At-Risk Mental State and in First-Episode Psychosis. PMID:32609372
Lipidomics of human adipose tissue reveals diversity between body areas. PMID:32544198
QSRR Automator: A Tool for Automating Retention Time Prediction in Lipidomics and Metabolomics. PMID:32526851
Accumulation of long-chain fatty acids in the tumor microenvironment drives dysfunction in intrapancreatic CD8+ T cells. PMID:32491160
Combining native and 'omics' mass spectrometry to identify endogenous ligands bound to membrane proteins. PMID:32371966
Lipidomic Profiling for Serum Biomarkers in Mice Exposed to Ionizing Radiation. PMID:32362795
Mtrr hypomorphic mutation alters liver morphology, metabolism and fuel storage in mice. PMID:32257815
"notame": Workflow for Non-Targeted LC-MS Metabolic Profiling. PMID:32244411
Altered composition and functional profile of high-density lipoprotein in leprosy patients. PMID:32226013
Metabolic changes during respiratory syncytial virus infection of epithelial cells. PMID:32214395
Structural and Functional Changes in Prokaryotic Communities in Artificial Pit Mud during Chinese Baijiu Production. PMID:32209718
Deregulation of the Purine Pathway in Pre-Transplant Liver Biopsies Is Associated with Graft Function and Survival after Transplantation. PMID:32151072
Lipidomic profiles, lipid trajectories and clinical biomarkers in female elite endurance athletes. PMID:32047202
Plasma lipid profile associates with the improvement of psychological well-being in individuals with perceived stress symptoms. PMID:32034255
Characterisation of the Serum Metabolic Signature of Cholangiocarcinoma in a United Kingdom Cohort. PMID:32025163
Lipids and small metabolites provisioned by ambrosia fungi to symbiotic beetles are phylogeny-dependent, not convergent. PMID:31988472
Integrative Metabolic Pathway Analysis Reveals Novel Therapeutic Targets in Osteoarthritis. PMID:31980557
Association between phospholipid metabolism in plasma and spontaneous preterm birth: a discovery lipidomic analysis in the cork pregnancy cohort. PMID:31974687
Describing the fecal metabolome in cryogenically collected samples from healthy participants. PMID:31965056
Emerging Insights into the Metabolic Alterations in Aging Using Metabolomics. PMID:31847272
Lipidomics from sample preparation to data analysis: a primer. PMID:31820027
Metabolome-Wide Association Study of Deployment to Balad, Iraq or Bagram, Afghanistan. PMID:31800448
Localized Metabolomic Gradients in Patient-Derived Xenograft Models of Glioblastoma. PMID:31767628
Comparative spatial lipidomics analysis reveals cellular lipid remodelling in different developmental zones of barley roots in response to salinity. PMID:31714612
Exploiting the Semidestructive Nature of Gas Cluster Ion Beam Time-of-Flight Secondary Ion Mass Spectrometry Imaging for Simultaneous Localization and Confident Lipid Annotations. PMID:31659904
WZ66, a novel acetyl-CoA carboxylase inhibitor, alleviates nonalcoholic steatohepatitis (NASH) in mice. PMID:31645659
Metabolic Profiling and Compound-Class Identification Reveal Alterations in Serum Triglyceride Levels in Mice Immunized with Human Vaccine Adjuvant Alum. PMID:31625748
Spatio-Temporal Metabolite and Elemental Profiling of Salt Stressed Barley Seeds During Initial Stages of Germination by MALDI-MSI and µ-XRF Spectrometry. PMID:31608088
High-Performance Molecular Imaging with MALDI Trapped Ion-Mobility Time-of-Flight (timsTOF) Mass Spectrometry. PMID:31593446
Pre- and Postoperative Neratinib for HER2-Positive Breast Cancer Brain Metastases: Translational Breast Cancer Research Consortium 022. PMID:31558424
The metaRbolomics Toolbox in Bioconductor and beyond. PMID:31548506
A precision medicine approach to defining the impact of doxorubicin on the bioenergetic-metabolite interactome in human platelets. PMID:31546171
Lymphatic Cannulation for Lymph Sampling and Molecular Delivery. PMID:31519866
Combination of Low-Temperature Electrosurgical Unit and Extractive Electrospray Ionization Mass Spectrometry for Molecular Profiling and Classification of Tissues. PMID:31443190
Generation of Human Fatty Livers Using Custom-Engineered Induced Pluripotent Stem Cells with Modifiable SIRT1 Metabolism. PMID:31390551
Cardiolipin-Dependent Properties of Model Mitochondrial Membranes from Molecular Simulations. PMID:31349988
Mass Spectrometry in Advancement of Redox Precision Medicine. PMID:31347057
Uncovering mechanisms of global ocean change effects on the Dungeness crab (Cancer magister) through metabolomics analysis. PMID:31341175
Deep Metabolomics of a High-Grade Serous Ovarian Cancer Triple-Knockout Mouse Model. PMID:31290664
Chitosan Oligosaccharide Ameliorates Nonalcoholic Fatty Liver Disease (NAFLD) in Diet-Induced Obese Mice. PMID:31269758
The Effects of Age and Reproduction on the Lipidome of Caenorhabditis elegans. PMID:31249646
Metabolomics of childhood exposure to perfluoroalkyl substances: a cross-sectional study. PMID:31227916
The Effect of Anticoagulants, Temperature, and Time on the Human Plasma Metabolome and Lipidome from Healthy Donors as Determined by Liquid Chromatography-Mass Spectrometry. PMID:31126114
Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry. PMID:31122012
A Comprehensive UHPLC Ion Mobility Quadrupole Time-of-Flight Method for Profiling and Quantification of Eicosanoids, Other Oxylipins, and Fatty Acids. PMID:31074960
Evaluation of an untargeted nano-liquid chromatography-mass spectrometry approach to expand coverage of low molecular weight dissolved organic matter in Arctic soil. PMID:30967565
Mitochondria in precision medicine; linking bioenergetics and metabolomics in platelets. PMID:30877854
Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance. PMID:30859819
Metabolomic Insights into Human Arboviral Infections: Dengue, Chikungunya, and Zika Viruses. PMID:30845653
Italian cohort of patients affected by inflammatory bowel disease is characterised by variation in glycerophospholipid, free fatty acids and amino acid levels. PMID:30830399
Targeted and global pharmacometabolomics in everolimus-based immunosuppression: association of co-medication and lysophosphatidylcholines with dose requirement. PMID:30830337
A Model Integration Pipeline for the Improvement of Human Genome-Scale Metabolic Reconstructions. PMID:30808160
Differential effects of coral-giant clam assemblages on biofouling formation. PMID:30804382
Molecular Characterization of Prostate Cancer with Associated Gleason Score Using Mass Spectrometry Imaging. PMID:30745465
Deep-ultraviolet laser ablation electrospray ionization mass spectrometry. PMID:30675964
A chemical-genetic screen identifies ABHD12 as an oxidized-phosphatidylserine lipase. PMID:30643283
Leveraging Multilayered "Omics" Data for Atopic Dermatitis: A Road Map to Precision Medicine. PMID:30631320
Sweep Jet Collection Laser-Induced Acoustic Desorption Atmospheric Pressure Photoionization for Lipid Analysis Applications. PMID:30617859
Peak Annotation and Verification Engine for Untargeted LC-MS Metabolomics. PMID:30586294
Lipidomics Reveals a Tissue-Specific Fingerprint. PMID:30210358
Specific cardiolipin-SecY interactions are required for proton-motive force stimulation of protein secretion. PMID:30012626
The effects of kisspeptin on β-cell function, serum metabolites and appetite in humans. PMID:29974637
Lipidomics Suggests a New Role for Ceramide Synthase in Phagocytosis. PMID:29963848
Comparative Evaluation of MS-based Metabolomics Software and Its Application to Preclinical Alzheimer's Disease. PMID:29915347
Metabolite extraction for high-throughput FTICR-MS-based metabolomics of grapevine leaves. PMID:29900113
Metabolomics and Ionomics of Potato Tuber Reveals an Influence of Cultivar and Market Class on Human Nutrients and Bioactive Compounds. PMID:29876353
Novel Biomarker Candidates for Febrile Neutropenia in Hematological Patients Using Nontargeted Metabolomics. PMID:29849825
High-mass-resolution MALDI mass spectrometry imaging reveals detailed spatial distribution of metabolites and lipids in roots of barley seedlings in response to salinity stress. PMID:29681790
Structural Lipids Enable the Formation of Functional Oligomers of the Eukaryotic Purine Symporter UapA. PMID:29681524
Integrated genomic and metabolomic profiling of ISC1, an emerging Leishmania donovani population in the Indian subcontinent. PMID:29679745
Substrate Specificities and Efflux Efficiencies of RND Efflux Pumps of Acinetobacter baumannii. PMID:29661860
The Warburg Effect in Diabetic Kidney Disease. PMID:29602394
KniMet: a pipeline for the processing of chromatography-mass spectrometry metabolomics data. PMID:29576760
Experimental Chagas disease-induced perturbations of the fecal microbiome and metabolome. PMID:29529084
Paradigm shift - Metabolic transformation of docosahexaenoic and eicosapentaenoic acids to bioactives exemplify the promise of fatty acid drug discovery. PMID:29499340
Precursor-Receptor Interactions in the Twin Arginine Protein Transport Pathway Probed with a New Receptor Complex Preparation. PMID:29460615
Hopanoid lipids: from membranes to plant-bacteria interactions. PMID:29456243
Time-series lipidomic analysis of the oleaginous green microalga species Ettlia oleoabundans under nutrient stress. PMID:29441127
Layer-specific lipid signatures in the human subventricular zone demonstrated by imaging mass spectrometry. PMID:29416059
Blood serum metabolome of atopic dermatitis: Altered energy cycle and the markers of systemic inflammation. PMID:29176763
Chemotaxonomic Classification Applied to the Identification of Two Closely-Related Citrus TCMs Using UPLC-Q-TOF-MS-Based Metabolomics. PMID:29027971
Rapid determination of medulloblastoma subgroup affiliation with mass spectrometry using a handheld picosecond infrared laser desorption probe. PMID:28989676
Avocado fruit maturation and ripening: dynamics of aliphatic acetogenins and lipidomic profiles from mesocarp, idioblasts and seed. PMID:28969589
Mass Spectrometry-Based Chemical Cartography of a Cardiac Parasitic Infection. PMID:28892370
Lipidomic Signatures of Nonhuman Primates with Radiation-Induced Hematopoietic Syndrome. PMID:28852188
Imaging regiospecific lipid turnover in mouse brain with desorption electrospray ionization mass spectrometry. PMID:28743728
biochem4j: Integrated and extensible biochemical knowledge through graph databases. PMID:28708831
Matrix coating assisted by an electric field (MCAEF) for enhanced tissue imaging by MALDI-MS. PMID:28706636
The metabolic analysis of psoriasis identifies the associated metabolites while providing computational models for the monitoring of the disease. PMID:28695330
Application of metabolomics in sarcoma: From biomarkers to therapeutic targets. PMID:28693790
LipidMatch: an automated workflow for rule-based lipid identification using untargeted high-resolution tandem mass spectrometry data. PMID:28693421
Rapid evaporative ionisation mass spectrometry of electrosurgical vapours for the identification of breast pathology: towards an intelligent knife for breast cancer surgery. PMID:28535818
Deep learning and 3D-DESI imaging reveal the hidden metabolic heterogeneity of cancer. PMID:28507724
A relative quantitative positive/negative ion switching method for untargeted lipidomics via high resolution LC-MS/MS from any biological source. PMID:28496395
Metabolites contributing to Rhizoctonia solani AG-1-IA maturation and sclerotial differentiation revealed by UPLC-QTOF-MS metabolomics. PMID:28489938
Metabolic Dysregulation after Neutron Exposures Expected from an Improvised Nuclear Device. PMID:28475424
LipidFinder: A computational workflow for discovery of lipids identifies eicosanoid-phosphoinositides in platelets. PMID:28405621
A Lipidomic and Metabolomic Serum Signature from Nonhuman Primates Exposed to Ionizing Radiation. PMID:28220056
Opinion article on lipidomics: Inherent challenges of lipidomic analysis of sphingolipids. PMID:28161582
Role of phosphatidylserine synthase in shaping the phospholipidome of Candida albicans. PMID:28158422
Mass spectrometry imaging: a novel technology in rheumatology. PMID:27881864
Assessment of pathological response to therapy using lipid mass spectrometry imaging. PMID:27841360
Hippocampal lipid differences in Alzheimer's disease: a human brain study using matrix-assisted laser desorption/ionization-imaging mass spectrometry. PMID:27781133
Differential human urinary lipid profiles using various lipid-extraction protocols: MALDI-TOF and LIFT-TOF/TOF analyses. PMID:27646409
Computational Metabolomics: A Framework for the Million Metabolome. PMID:27629808
High-mass-resolution MALDI mass spectrometry imaging of metabolites from formalin-fixed paraffin-embedded tissue. PMID:27414759
Mass Spectrometry Imaging Reveals Elevated Glomerular ATP/AMP in Diabetes/obesity and Identifies Sphingomyelin as a Possible Mediator. PMID:27322466
A metabolomics cell-based approach for anticipating and investigating drug-induced liver injury. PMID:27265840
Applications of Fourier Transform Ion Cyclotron Resonance (FT-ICR) and Orbitrap Based High Resolution Mass Spectrometry in Metabolomics and Lipidomics. PMID:27231903
Whole Reproductive System Non-Negative Matrix Factorization Mass Spectrometry Imaging of an Early-Stage Ovarian Cancer Mouse Model. PMID:27159635
Wolbachia Modulates Lipid Metabolism in Aedes albopictus Mosquito Cells. PMID:26994075
The Impact of Ischemia/Reperfusion Injury on Liver Allografts from Deceased after Cardiac Death versus Deceased after Brain Death Donors. PMID:26863224
Surfactant Lipids at the Host-Environment Interface. Metabolic Sensors, Suppressors, and Effectors of Inflammatory Lung Disease. PMID:26859434
Antiviral innate immunity through the lens of systems biology. PMID:26657882
Lipidomics comparing DCD and DBD liver allografts uncovers lysophospholipids elevated in recipients undergoing early allograft dysfunction. PMID:26635289
Peripheral Circadian Clocks Mediate Dietary Restriction-Dependent Changes in Lifespan and Fat Metabolism in Drosophila. PMID:26626459
An in silico MS/MS library for automatic annotation of novel FAHFA lipids. PMID:26579213
Modification of the Host Cell Lipid Metabolism Induced by Hypolipidemic Drugs Targeting the Acetyl Coenzyme A Carboxylase Impairs West Nile Virus Replication. PMID:26503654
The LUX Score: A Metric for Lipidome Homology. PMID:26393792
The metabolic response of marine copepods to environmental warming and ocean acidification in the absence of food. PMID:26364855
Characterization and Modeling of the Collision Induced Dissociation Patterns of Deprotonated Glycosphingolipids: Cleavage of the Glycosidic Bond. PMID:26297186
Organization of the Mammalian Metabolome according to Organ Function, Lineage Specialization, and Longevity. PMID:26244935
Arteriovenous Blood Metabolomics: A Readout of Intra-Tissue Metabostasis. PMID:26244428
Unsaturated fatty acids as high-affinity ligands of the C-terminal Per-ARNT-Sim domain from the Hypoxia-inducible factor 3α. PMID:26237540
An Interactive Cluster Heat Map to Visualize and Explore Multidimensional Metabolomic Data. PMID:26195918
Mass Spectrometry-based Lipidomics and Its Application to Biomedical Research. PMID:26064851
Application of metabolomics in thyroid cancer research. PMID:25972898
The SwissLipids knowledgebase for lipid biology. PMID:25943471
ESI-MS/MS and MALDI-IMS Localization Reveal Alterations in Phosphatidic Acid, Diacylglycerol, and DHA in Glioma Stem Cell Xenografts. PMID:25880480
Systems biology analysis merging phenotype, metabolomic and genomic data identifies Non-SMC Condensin I Complex, Subunit G (NCAPG) and cellular maintenance processes as major contributors to genetic variability in bovine feed efficiency. PMID:25875852
Targeting of the hydrophobic metabolome by pathogens. PMID:25754025
Urine and serum metabolite profiling of rats fed a high-fat diet and the anti-obesity effects of caffeine consumption. PMID:25689639
MRM-DIFF: data processing strategy for differential analysis in large scale MRM-based lipidomics studies. PMID:25688256
Untargeted UPLC-MS profiling pipeline to expand tissue metabolome coverage: application to cardiovascular disease. PMID:25664760
Experimental resistance to drug combinations in Leishmania donovani: metabolic and phenotypic adaptations. PMID:25645828
Qualitative characterization of the rat liver mitochondrial lipidome using all ion fragmentation on an Exactive benchtop Orbitrap MS. PMID:25631033
Subcellular metabolite and lipid analysis of Xenopus laevis eggs by LAESI mass spectrometry. PMID:25506922
TORC2-dependent protein kinase Ypk1 phosphorylates ceramide synthase to stimulate synthesis of complex sphingolipids. PMID:25279700
Lipid characterization of individual porcine oocytes by dual mode DESI-MS and data fusion. PMID:25263116
Exploring metabolic pathways and regulation through functional chemoproteomic and metabolomic platforms. PMID:25237861
Species specificity of symbiosis and secondary metabolism in ascidians. PMID:25171330
Application of stable isotope-assisted metabolomics for cell metabolism studies. PMID:24957020
Lipids in cell biology: how can we understand them better? PMID:24925915
Metabolomics of Ramadan fasting: an opportunity for the controlled study of physiological responses to food intake. PMID:24906381
CFM-ID: a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra. PMID:24895432
Metabolomic Characterization of Knockout Mutants in Arabidopsis: Development of a Metabolite Profiling Database for Knockout Mutants in Arabidopsis. PMID:24828308
LIPID MAPS-Nature Lipidomics Gateway: An Online Resource for Students and Educators Interested in Lipids. PMID:24764601
Lactobacillus acidophilus NCFM affects vitamin E acetate metabolism and intestinal bile acid signature in monocolonized mice. PMID:24717228
Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans. PMID:24690587
Systems-level analysis of innate immunity. PMID:24655298
Metabolomic insights into system-wide coordination of vertebrate metamorphosis. PMID:24495308
Gangliosides as a potential new class of stem cell markers: the case of GD1a in human bone marrow mesenchymal stem cells. PMID:24449473
Desorption electrospray ionization mass spectrometry reveals lipid metabolism of individual oocytes and embryos. PMID:24073231
Lipidomics technologies at the end of the first decade and the beginning of the next. PMID:24038259
metabolicMine: an integrated genomics, genetics and proteomics data warehouse for common metabolic disease research. PMID:23935057
LipidBlast in silico tandem mass spectrometry database for lipid identification. PMID:23817071
Evaluation of normalization methods to pave the way towards large-scale LC-MS-based metabolomics profiling experiments. PMID:23808607
Silicon era of carbon-based life: application of genomics and bioinformatics in crop stress research. PMID:23759993
Small-volume analysis of cell-cell signaling molecules in the brain. PMID:23748227
Lipidomic analysis of human plasma reveals ether-linked lipids that are elevated in morbidly obese humans compared to lean. PMID:23672807
Qualitative Characterization of the Rat Liver Mitochondrial Lipidome using LC-MS Profiling and High Energy Collisional Dissociation (HCD) All Ion Fragmentation. PMID:23646040
Recent progress in the development of metabolome databases for plant systems biology. PMID:23577015
Chapter 3: Small molecules and disease. PMID:23300405
Trans-fatty acids, dangerous bonds for health? A background review paper of their use, consumption, health implications and regulation in France. PMID:23269652
Method development for fecal lipidomics profiling. PMID:23210743
HMDB 3.0--The Human Metabolome Database in 2013. PMID:23161693
Direct imaging of single cells and tissue at sub-cellular spatial resolution using transmission geometry MALDI MS. PMID:23147833
LC-MS based serum metabolomics for identification of hepatocellular carcinoma biomarkers in Egyptian cohort. PMID:23078175
Mass spectrometry images acylcarnitines, phosphatidylcholines, and sphingomyelin in MDA-MB-231 breast tumor models. PMID:22930811
Utilization of metabolomics to identify serum biomarkers for hepatocellular carcinoma in patients with liver cirrhosis. PMID:22882828
Ion annotation-assisted analysis of LC-MS based metabolomic experiment. PMID:22759585
Mass spectrometry-based metabolomics to elucidate functions in marine organisms and ecosystems. PMID:22690147
Recent advances of metabolomics in plant biotechnology. PMID:22308170
Bioinformatics and systems biology of the lipidome. PMID:21939287
Triacylglycerol profiling of microalgae strains for biofuel feedstock by liquid chromatography-high-resolution mass spectrometry. PMID:21915640
Serum metabolomics reveals higher levels of polyunsaturated fatty acids in lepromatous leprosy: potential markers for susceptibility and pathogenesis. PMID:21909445
Prototype semantic infrastructure for automated small molecule classification and annotation in lipidomics. PMID:21791100
Serum lipidomics profiling using LC-MS and high-energy collisional dissociation fragmentation: focus on triglyceride detection and characterization. PMID:21774539
Lipid analysis and lipidomics by structurally selective ion mobility-mass spectrometry. PMID:21708282
Lipid classification, structures and tools. PMID:21704189
Quantitative analysis of glycerophospholipids by LC-MS: acquisition, data handling, and interpretation. PMID:21683157
Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration. PMID:21595881
Untargeted metabolomics identifies enterobiome metabolites and putative uremic toxins as substrates of organic anion transporter 1 (Oat1). PMID:21476605
The human serum metabolome. PMID:21359215
Metabolomics to unveil and understand phenotypic diversity between pathogen populations. PMID:21152055
MIPS: curated databases and comprehensive secondary data resources in 2010. PMID:21109531
Further developments towards a genome-scale metabolic model of yeast. PMID:21029416
Solution structure and function of YndB, an AHSA1 protein from Bacillus subtilis. PMID:20818668
Metabolomic characterization of the salt stress response in Streptomyces coelicolor. PMID:20190082
Oxidation of the endogenous cannabinoid arachidonoyl ethanolamide by the cytochrome P450 monooxygenases: physiological and pharmacological implications. PMID:20133390
The role of mass spectrometry-based metabolomics in medical countermeasures against radiation. PMID:19890938
Response and recovery in the plasma metabolome tracks the acute LCMV-induced immune response. PMID:19496611
Database resources in metabolomics: an overview. PMID:19418229
Algorithms for automatic processing of data from mass spectrometric analyses of lipids. PMID:19131280
Update of the LIPID MAPS comprehensive classification system for lipids. PMID:19098281
Towards high-throughput metabolomics using ultrahigh-field Fourier transform ion cyclotron resonance mass spectrometry. PMID:19081807
Ceramide signaling in cancer and stem cells. PMID:19050750
Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum. PMID:19043545
HMDB: a knowledgebase for the human metabolome. PMID:18953024
EndoNet: an information resource about regulatory networks of cell-to-cell communication. PMID:18045786

Tags:

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More detailed information about this field from each metasource.

lipid
metasource: Fairsharing.org
version: FAIRsharing.org: LIPID MAPS; LIPID MAPS; DOI: https://doi.org/10.25504/FAIRsharing.cpneh8; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

mass spectrometry spectra
metasource: Fairsharing.org
version: FAIRsharing.org: LIPID MAPS; LIPID MAPS; DOI: https://doi.org/10.25504/FAIRsharing.cpneh8; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

structure
metasource: Fairsharing.org
version: FAIRsharing.org: LIPID MAPS; LIPID MAPS; DOI: https://doi.org/10.25504/FAIRsharing.cpneh8; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

taxonomic classification
metasource: Fairsharing.org
version: FAIRsharing.org: LIPID MAPS; LIPID MAPS; DOI: https://doi.org/10.25504/FAIRsharing.cpneh8; Last edited: Jan. 8, 2019, 1:20 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

protein sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

databases of individual protein families
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

lipid classification system
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

biochemistry
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

lipid metabolism
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

lipid-based disease
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

lipids
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

mammalian cells
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

mass spectrometry
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

metabolite
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

metabolomics
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

molecule
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

pathway
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

pathways
metasource: re3data.org
version: re3data.org: LIPID MAPS Lipidomics Gateway; editing status 2019-01-25; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3WW7G last accessed: 2022-11-04

lipid mass spectrometry spectra structure taxonomic classification protein sequence protein family lipid classification system biochemistry lipid metabolism lipid-based disease lipids mammalian cells mass spectrometry metabolite metabolomics molecule pathway pathways

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Lipid Ontology

SwissLipids

RaftProt

GOLD.db - Genomics Of Lipid-associated Disorders

YPIBP

LipidOntology

PDB_TM

nsLTP

Reference list of Metabolite names

LipidBank

LipidIMMS

Gene Ontology

UniProt Knowledgebase

Pharmacogenomics Knowledge Base

Health Data Research Innovation Gateway

TMPad

Gene Ontology Annotation Database

ORFDB

CLiP Chlamydomonas

Manually Curated Database of Rice Proteins