The Landscape of Virus-Host Protein-Protein Interaction Databases.
PMID:35910656
Deciphering the Crosstalk Mechanisms of Wheat-Stem Rust Pathosystem: Genome-Scale Prediction Unravels Novel Host Targets.
PMID:35800602
PHILM2Web: A high-throughput database of macromolecular host-pathogen interactions on the Web.
PMID:35776535
Integrated analysis of microbe-host interactions in Crohn's disease reveals potential mechanisms of microbial proteins on host gene expression.
PMID:35479407
Tandem Mass Tagging (TMT) Reveals Tissue-Specific Proteome of L4 Larvae of Anisakis simplex s. s.: Enzymes of Energy and/or Carbohydrate Metabolism as Potential Drug Targets in Anisakiasis.
PMID:35457153
Deciphering the Host-Pathogen Interactome of the Wheat-Common Bunt System: A Step towards Enhanced Resilience in Next Generation Wheat.
PMID:35269732
Computational Systems Biology of Alfalfa - Bacterial Blight Host-Pathogen Interactions: Uncovering the Complex Molecular Networks for Developing Durable Disease Resistant Crop.
PMID:35251063
Proteomic Profiling and In Silico Characterization of the Secretome of Anisakis simplex Sensu Stricto L3 Larvae.
PMID:35215189
Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions.
PMID:34046017
A Molecular Interaction Map of Klebsiella pneumoniae and Its Human Host Reveals Potential Mechanisms of Host Cell Subversion.
PMID:33679637
Comparative Genomics and Integrated Network Approach Unveiled Undirected Phylogeny Patterns, Co-mutational Hot Spots, Functional Cross Talk, and Regulatory Interactions in SARS-CoV-2.
PMID:33622851
Internetwork connectivity of molecular networks across species of life.
PMID:33441907
Elucidating potential molecular signatures through host-microbe interactions for reactive arthritis and inflammatory bowel disease using combinatorial approach.
PMID:32934294
Methanobacterium formicicum as a target rumen methanogen for the development of new methane mitigation interventions: A review.
PMID:32734058
MicrobioLink: An Integrated Computational Pipeline to Infer Functional Effects of Microbiome-Host Interactions.
PMID:32455748
Novel Target Exploration from Hypothetical Proteins of Klebsiella pneumoniae MGH 78578 Reveals a Protein Involved in Host-Pathogen Interaction.
PMID:32318354
Recent trends in molecular diagnostics of yeast infections: from PCR to NGS.
PMID:31158289
MAFFT-DASH: integrated protein sequence and structural alignment.
PMID:31062021
Collective influencers in protein interaction networks.
PMID:30850642
Transposon mutagenesis and identification of mutated genes in growth-delayed Edwardsiella ictaluri.
PMID:30849940
Interface-Based Structural Prediction of Novel Host-Pathogen Interactions.
PMID:30298406
Evolution of In Silico Strategies for Protein-Protein Interaction Drug Discovery.
PMID:30082644
Protein-protein interactions of human viruses.
PMID:30031213
Prediction of human-Bacillus anthracis protein-protein interactions using multi-layer neural network.
PMID:29945178
Beyond degree and betweenness centrality: Alternative topological measures to predict viral targets.
PMID:29795705
System-wide coordinates of higher order functions in host-pathogen environment upon Mycobacterium tuberculosis infection.
PMID:29567998
Development of Protein-Protein Interaction Inhibitors for the Treatment of Infectious Diseases.
PMID:29459032
A Systematic In-silico Analysis of Helicobacter pylori Pathogenic Islands for Identification of Novel Drug Target Candidates.
PMID:29081700
Structural host-microbiota interaction networks.
PMID:29023448
Protein-Protein Interactions in Virus-Host Systems.
PMID:28861068
Study of intra-inter species protein-protein interactions for potential drug targets identification and subsequent drug design for Escherichia coli O104:H4 C277-11.
PMID:28401513
Using structural knowledge in the protein data bank to inform the search for potential host-microbe protein interactions in sequence space: application to Mycobacterium tuberculosis.
PMID:28376709
PCPPI: a comprehensive database for the prediction of Penicillium-crop protein-protein interactions.
PMID:28365721
Comparative Genomics of the Zoonotic Pathogen Ehrlichia chaffeensis Reveals Candidate Type IV Effectors and Putative Host Cell Targets.
PMID:28180111
Centrality in the host-pathogen interactome is associated with pathogen fitness during infection.
PMID:28090086
Local Action with Global Impact: Highly Similar Infection Patterns of Human Viruses and Bacteriophages.
PMID:27822522
A review on host-pathogen interactions: classification and prediction.
PMID:27470504
HPIDB 2.0: a curated database for host-pathogen interactions.
PMID:27374121
Reconstruction and Application of Protein-Protein Interaction Network.
PMID:27338356
Viruses are a dominant driver of protein adaptation in mammals.
PMID:27187613
Target identification in Fusobacterium nucleatum by subtractive genomics approach and enrichment analysis of host-pathogen protein-protein interactions.
PMID:27176600
Editorial: Computational Systems Biology of Pathogen-Host Interactions.
PMID:26870002
Uncovering New Pathogen-Host Protein-Protein Interactions by Pairwise Structure Similarity.
PMID:26799490
Literature Mining and Ontology based Analysis of Host-Brucella Gene-Gene Interaction Network.
PMID:26696993
Host-Microbe Protein Interactions during Bacterial Infection.
PMID:26548613
Application of Functional Genomics for Bovine Respiratory Disease Diagnostics.
PMID:26526746
Integrative Genomics-Based Discovery of Novel Regulators of the Innate Antiviral Response.
PMID:26485378
Integrated inference and evaluation of host-fungi interaction networks.
PMID:26300851
Computational analysis of protein interaction networks for infectious diseases.
PMID:26261187
A review on computational systems biology of pathogen-host interactions.
PMID:25914674
Prediction of host - pathogen protein interactions between Mycobacterium tuberculosis and Homo sapiens using sequence motifs.
PMID:25887594
Computational approaches for prediction of pathogen-host protein-protein interactions.
PMID:25759684
Computational prediction of molecular pathogen-host interactions based on dual transcriptome data.
PMID:25705211
Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study.
PMID:25652942
Network representations of immune system complexity.
PMID:25625853
Identification of putative interactions between swine and human influenza A virus nucleoprotein and human host proteins.
PMID:25547032
Diffusion of information throughout the host interactome reveals gene expression variations in network proximity to target proteins of hepatitis C virus.
PMID:25461596
The Pathogen-Host Interactions database (PHI-base): additions and future developments.
PMID:25414340
VirHostNet 2.0: surfing on the web of virus/host molecular interactions data.
PMID:25392406
Predicting genome-scale Arabidopsis-Pseudomonas syringae interactome using domain and interolog-based approaches.
PMID:25350354
Drug-Like Protein-Protein Interaction Modulators: Challenges and Opportunities for Drug Discovery and Chemical Biology.
PMID:25254076
Integrating structure to protein-protein interaction networks that drive metastasis to brain and lung in breast cancer.
PMID:24278371
High-throughput RNA interference screens integrative analysis: Towards a comprehensive understanding of the virus-host interplay.
PMID:24175227
Computational analysis of virus-host interactomes.
PMID:23996253
A systematic analysis of host factors reveals a Med23-interferon-λ regulatory axis against herpes simplex virus type 1 replication.
PMID:23950709
Predicting and analyzing interactions between Mycobacterium tuberculosis and its human host.
PMID:23844013
Multitask learning for host-pathogen protein interactions.
PMID:23812987
Computational analysis of interactomes: current and future perspectives for bioinformatics approaches to model the host-pathogen interaction space.
PMID:22750305
Infection Strategies of Bacterial and Viral Pathogens through Pathogen-Human Protein-Protein Interactions.
PMID:22347880
Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference. Introduction.
PMID:22165918
AgBase: supporting functional modeling in agricultural organisms.
PMID:21075795
Proceedings of the 2010 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference.
PMID:20946592