GlycoRDF
Names
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GlycoRDF
metasource: Fairsharing.org
version: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
GLYCORDF
metasource: Fairsharing.org
version: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
Names
More detailed information about this field from each metasource.
GlycoRDF
metasource: Fairsharing.orgversion: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
GLYCORDF
metasource: Fairsharing.orgversion: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
Names
More detailed information about this field from each metasource.
GlycoRDF
metasource: Fairsharing.orgversion: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
GLYCORDF
metasource: Fairsharing.orgversion: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
GlycoRDF is a standard representation for storing Glycomcis data (glycan structures, publication information, biological source information, experimental data) in RDF. The RDF language is defined by an OWL ontology and documented in the ontology and generated WORD files. Its GitHub repository also contains source code for the generation of RDF data for glycomics databases.
Description
More detailed information about this field from each metasource.
GlycoRDF is a standard representation for storing Glycomcis data (glycan structures, publication information, biological source information, experimental data) in RDF. The RDF language is defined by an OWL ontology and documented in the ontology and generated WORD files. Its GitHub repository also contains source code for the generation of RDF data for glycomics databases.
metasource: Fairsharing.orgversion: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
GlycoRDF is a standard representation for storing Glycomcis data (glycan structures, publication information, biological source information, experimental data) in RDF.
metasource: Biontology / Bioportalversion: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
Webpage:
http://www.glycoinfo.org/GlycoRDF/Webpage
More detailed information about this field from each metasource.
http://www.glycoinfo.org/GlycoRDF/
metasource: Fairsharing.orgversion: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
https://github.com/glycoinfo/GlycoRDF
metasource: Biontology / Bioportalversion: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
Publications:
Publications
More detailed information about this field from each metasource.
GlycoRDF: an ontology to standardize glycomics data in RDF
PMID: 25388145
metasource: Fairsharing.org
version: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Introducing glycomics data into the Semantic Web
PMID: 24280648
metasource: Fairsharing.org
version: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
http://bioinformatics.oxfordjournals.org/content/31/6/919.long
metasource: Biontology / Bioportal
version: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
Publications
More detailed information about this field from each metasource.
GlycoRDF: an ontology to standardize glycomics data in RDF
PMID: 25388145
metasource: Fairsharing.org
version: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Introducing glycomics data into the Semantic Web
PMID: 24280648
metasource: Fairsharing.org
version: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
http://bioinformatics.oxfordjournals.org/content/31/6/919.long
metasource: Biontology / Bioportalversion: 1.3.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/GLYCORDF
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GlycoRDF: an ontology to standardize glycomics data in RDF
PubMed citations: 19.
19 articles citing: GlycoRDF: an ontology to standardize glycomics data in RDF
Source files of the Carbohydrate Structure Database: the way to sophisticated analysis of natural glycans. PMID:35354826
RDFizing the biosynthetic pathway of E.coli O-antigen to enable semantic sharing of microbiology data. PMID:34809564
Recent advances in mass spectrometry analysis of neuropeptides. PMID:34558119
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application. PMID:33677548
Big-Data Glycomics: Tools to Connect Glycan Biosynthesis to Extracellular Communication. PMID:33349503
GlyGen data model and processing workflow. PMID:32324859
BioHackathon 2015: Semantics of data for life sciences and reproducible research. PMID:32308977
An effective biomedical data migration tool from resource description framework to JSON. PMID:31343683
glypy: An Open Source Glycoinformatics Library. PMID:31310539
Composition of the Biofilm Matrix of Cutibacterium acnes Acneic Strain RT5. PMID:31293526
Glycomics@ExPASy: Bridging the Gap. PMID:30097532
The Glycoscience of Immunity. PMID:29759949
Emerging glycobiology tools: A renaissance in accessibility. PMID:29759530
Knowledge Representation and Management: a Linked Data Perspective. PMID:27830248
Property Graph vs RDF Triple Store: A Comparison on Glycan Substructure Search. PMID:26656740
SugarBindDB, a resource of glycan-mediated host-pathogen interactions. PMID:26578555
GlycoMob: an ion mobility-mass spectrometry collision cross section database for glycomics. PMID:26314736
Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts. PMID:26286194
Integration of systems glycobiology with bioinformatics toolboxes, glycoinformatics resources, and glycoproteomics data. PMID:25871730 -
Introducing glycomics data into the Semantic Web
PubMed citations: 13.
13 articles citing: Introducing glycomics data into the Semantic Web
Functions of Glycosylation and Related Web Resources for Its Prediction. PMID:35696078
Informatics Ecosystems to Advance the Biology of Glycans. PMID:34626414
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application. PMID:33677548
GlycoPOST realizes FAIR principles for glycomics mass spectrometry data. PMID:33174597
BioHackathon 2015: Semantics of data for life sciences and reproducible research. PMID:32308977
Property Graph vs RDF Triple Store: A Comparison on Glycan Substructure Search. PMID:26656740
SugarBindDB, a resource of glycan-mediated host-pathogen interactions. PMID:26578555
Carbohydrate structure database merged from bacterial, archaeal, plant and fungal parts. PMID:26286194
The Lectin Frontier Database (LfDB), and data generation based on frontal affinity chromatography. PMID:25580689
GlycoRDF: an ontology to standardize glycomics data in RDF. PMID:25388145
TogoTable: cross-database annotation system using the Resource Description Framework (RDF) data model. PMID:24829452
Toolboxes for a standardised and systematic study of glycans. PMID:24564482
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. PMID:24495517 - http://bioinformatics.oxfordjournals.org/content/31/6/919.long
Tags:
Tags
More detailed information about this field from each metasource.
molecular structure
metasource: Fairsharing.org
version: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
molecular structure
metasource: Fairsharing.orgversion: FAIRsharing.org: GLYCORDF; GlycoRDF; DOI: https://doi.org/10.25504/FAIRsharing.2fnz2n; Last edited: Feb. 5, 2019, 1:55 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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