Other names: core
The UniProt core is an OWL ontology that describes the predicates, classes and concepts used to model the UniProt data in RDF.
protein
Universal Protein resource. A database of protein sequence and functional information, many entries being derived from genome sequencing projects. It contains a large amount of information about the b ...
The taxonomy database that is maintained by the UniProt group is based on the NCBI taxonomy database, which is supplemented with data specific to the UniProt Knowledgebase (UniProtKB). While the NCBI ...
The UniProt Tissue List is a controlled vocabulary of terms used to annotate biological tissues in the "TISSUE" topic of the RC line type. It also contains cross-references to other ontologies where t ...
The UniProt Reference Clusters are three separate datasets that compress sequence space at different resolutions, achieved by merging sequences and sub-sequences that are 100% (UniRef100), >=90% (UniR ...
Darwin Core (DwC) is a vocabulary that includes a glossary of terms (in other contexts these might be called properties, elements, fields, columns, attributes, or concepts) intended to facilitate the ...
The GO Annotation Database (GOA) provides Gene Ontology (GO) annotations to proteins in the UniProt Knowledgebase (UniProtKB), RNA molecules from RNACentral and protein complexes from the Complex Port ...
The UniProt archive (UniParc), part of the UniProt databases, is an archival protein sequence collection from all major publicly accessible resources. New and revised protein sequences are added daily ...
GO FAIR Core Ontology's goal is to define key terms and their relations, independent on any implementation considerations, i.e. to provide ontological clarification. It is modelled using Unified Found ...
The Feature Annotation Location Description Ontology (FALDO), to describe the positions of annotated features on linear and circular sequences for data resources represented in RDF and/or OWL. FALDO c ...
The Core Ontology for Biology and Biomedicine (COB) brings together key terms from a wide range of OBO projects into a single, small ontology. The goal is to improve interoperabilty and reuse across t ...
>>>!!!!<<< Retirement of UniProt Metagenomic and Environmental Sequences (UniMES): UniProt has retired UniMES as there is now a resource at the EBI that is dedicated to serving metagenomic researche ...
GlycoRDF is a standard representation for storing Glycomcis data (glycan structures, publication information, biological source information, experimental data) in RDF. The RDF language is defined by a ...
OntoDM is a generic ontology for the domain of data mining. The ontology includes the information processing processes that occur in the domain of data mining, participants in the processes and their ...
The Cochrane Core Vocabulary ontology describes the entities and concepts that exist in the domain of evidence-based healthcare. It is used for the construction of the Cochrane Linked Data Vocabulary ...
XML Schema definition for the UniProtKB XML format.
DINTO is an OWL ontology that systematically organizes all drug-drug interaction (DDI) related information. Drug-drug interactions (DDIs) form a significant risk group for adverse effects associated w ...
Dispedia Core Ontology is a schema for information brokering and knowledge management in the complex field of rare diseases. On the one hand, the Dispedia schema uses semantic technologies to describe ...
Darwin Core (DwC) has become a mature set of standards designed for sharing biodiversity data. However, the inherent generality of the documentation has lead to broad interpretation of the terms or co ...
The IDO ontologies are designed as a set of interoperable ontologies that will together provide coverage of the infectious disease domain. At the core of the set is a general Infectious Disease Ontolo ...
The Darwin Core is meant to serve a global community. Access to the documents describing the standard in multiple languages will facilitate open access and global adoption. This resource is meant to b ...