FPbase

Community-editable fluorescent protein database, cataloging an expanded range of proteins and parameters, including a new spectra viewer.

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FPbase: a community-editable fluorescent protein database
PMID: 30886412

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:45.951647

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• FPbase: a community-editable fluorescent protein database PubMed citations: 68.

  68 articles citing: FPbase: a community-editable fluorescent protein database

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  Multiparameter in vivo imaging in plants using genetically encoded fluorescent indicator multiplexing. PMID:35237819

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  Fluorescent biosensors illuminating plant hormone research. PMID:35237816

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  An optimized retroviral toolbox for overexpression and genetic perturbation of primary lymphocytes. PMID:35229875

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  Generation of bright monomeric red fluorescent proteins via computational design of enhanced chromophore packing. PMID:35222925

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  Monitoring Virus-Induced Stress Granule Dynamics Using Long-Term Live-Cell Imaging. PMID:35171489

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  Using Live Imaging to Examine Early Cardiac Development in Zebrafish. PMID:35147940

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  Increased expression of the fluorescent reporter protein ymNeonGreen in Saccharomyces cerevisiae by reducing RNA secondary structure near the start codon. PMID:35036336

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  Hairy CRISPR: Genome Editing in Plants Using Hairy Root Transformation. PMID:35009056

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  Caveat fluorophore: an insiders' guide to small-molecule fluorescent labels. PMID:34949811

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  Deciphering cell signaling networks with massively multiplexed biosensor barcoding. PMID:34838160

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  Phenotyping clonal populations of glioma stem cell reveals a high degree of plasticity in response to changes of microenvironment. PMID:34782726

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  An Autonomous Molecular Bioluminescent Reporter (AMBER) for Voltage Imaging in Freely Moving Animals. PMID:34761564

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  Imaging the living plant cell: From probes to quantification. PMID:34586412

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  Rapid prototyping and design of cybergenetic single-cell controllers. PMID:34561433

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  Ectocytosis prevents accumulation of ciliary cargo in C. elegans sensory neurons. PMID:34533135

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  Single-laser-based simultaneous four-wavelength excitation source for femtosecond two-photon fluorescence microscopy. PMID:34513216

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  A protocol for whole-mount immuno-coupled hybridization chain reaction (WICHCR) in zebrafish embryos and larvae. PMID:34401776

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  SorTn-seq: a high-throughput functional genomics approach to discovering regulators of bacterial gene expression. PMID:34349283

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  Spatial omics and multiplexed imaging to explore cancer biology. PMID:34341583

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  Topography and motion of acid-sensing ion channel intracellular domains. PMID:34292153

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  Fluorescent Protein Expression as a Proxy for Bacterial Fitness in a High-Throughput Assay. PMID:34260309

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  Bacterial protein listeriolysin O induces nonmonotonic dynamics because of lipid ejection and crowding. PMID:34214525

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  Fluorescent Protein-Based Autophagy Biosensors. PMID:34199451

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  Genetically Encoded, pH-Sensitive mTFP1 Biosensor for Probing Lysosomal pH. PMID:34102054

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  Best practices and tools for reporting reproducible fluorescence microscopy methods. PMID:34099930

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  Chromophore reduction plus reversible photobleaching: how the mKate2 "photoconversion" works. PMID:34085171

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  Comparison of spectral FRET microscopy approaches for single-cell analysis. PMID:34035557

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  Advances in Confocal Microscopy and Selected Applications. PMID:34028709

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  pLannotate: engineered plasmid annotation. PMID:34019636

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  Imaging developmental cell cycles. PMID:33964274

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  Adaptive cell invasion maintains lateral line organ homeostasis in response to environmental changes. PMID:33878346

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  A biosensor for the direct visualization of auxin. PMID:33828298

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  Simultaneous readout of multiple FRET pairs using photochromism. PMID:33790271

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  Current and future advances in fluorescence-based visualization of plant cell wall components and cell wall biosynthetic machineries. PMID:33781321

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  Advanced imaging and labelling methods to decipher brain cell organization and function. PMID:33712727

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  Super-resolution Microscopy-based Bimolecular Fluorescence Complementation to Study Protein Complex Assembly and Co-localization. PMID:33654748

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  Corrole-Substituted Fluorescent Heme Proteins. PMID:33513009

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  Genetically Encoded Biosensors Based on Fluorescent Proteins. PMID:33504068

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  Algorithms for the selection of fluorescent reporters. PMID:33500520

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  FACS protocol for direct comparison of cell populations isolated from mice. PMID:33490986

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  Selection of Fluorescent, Bioluminescent, and Radioactive Tracers to Accurately Reflect Extracellular Vesicle Biodistribution in Vivo. PMID:33470092

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  Association of Fluorescent Protein Pairs and Its Significant Impact on Fluorescence and Energy Transfer. PMID:33437587

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  A supernumerary designer chromosome for modular in vivo pathway assembly in Saccharomyces cerevisiae. PMID:33423048

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  Visualization and Manipulation of Intracellular Signaling. PMID:33398816

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  Quantitative photoconversion analysis of internal molecular dynamics in stress granules and other membraneless organelles in live cells. PMID:33377110

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  Quantitative Imaging of MS2-Tagged hTR in Cajal Bodies: Photobleaching and Photoactivation. PMID:33377008

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  A sensitive mNeonGreen reporter system to measure transcriptional dynamics in Drosophila development. PMID:33184447

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  Bacterial Vivisection: How Fluorescence-Based Imaging Techniques Shed a Light on the Inner Workings of Bacteria. PMID:33115939

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  Resonance energy transfer sensitises and monitors in situ switching of LOV2-based optogenetic actuators. PMID:33037199

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  A general method to optimize and functionalize red-shifted rhodamine dyes. PMID:32719532

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  Evidence for rate-dependent filtering of global extrinsic noise by biochemical reactions in mammalian cells. PMID:32407587

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  Imaging flowers: a guide to current microscopy and tomography techniques to study flower development. PMID:32383442

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  Multiplex T Cell Stimulation Assay Utilizing a T Cell Activation Reporter-Based Detection System. PMID:32328071

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  Integration of Nodal and BMP Signaling by Mutual Signaling Effector Antagonism. PMID:32268105

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  Tutorial: guidance for quantitative confocal microscopy. PMID:32235926

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  DeCoDe: degenerate codon design for complete protein-coding DNA libraries. PMID:32176271

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  Fluorescent reporters for functional analysis in rice leaves. PMID:32072132

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  Comparing the performance of mScarlet-I, mRuby3, and mCherry as FRET acceptors for mNeonGreen. PMID:32023253

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  Correlative three-dimensional super-resolution and block-face electron microscopy of whole vitreously frozen cells. PMID:31949053

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  Multiparameter screening method for developing optimized red-fluorescent proteins. PMID:31942080

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  In Vitro FRET- and Fluorescence-Based Assays to Study Protein Conformation and Protein-Protein Interactions in Mitosis. PMID:31879900

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  Over the rainbow: A practical guide for fluorescent protein selection in plant FRET experiments. PMID:31844834

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  FRET Microscopy in Yeast. PMID:31614546

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  Unintended perturbation of protein function using GFP nanobodies in human cells. PMID:31601614

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  The Caenorhabditis elegans Transgenic Toolbox. PMID:31405997

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  Selective Immobilization of Fluorescent Proteins for the Fabrication of Photoactive Materials. PMID:31366154

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  Development and Applications of Superfolder and Split Fluorescent Protein Detection Systems in Biology. PMID:31311175

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  Designing a rigorous microscopy experiment: Validating methods and avoiding bias. PMID:30894402

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More detailed information about this field from each metasource. ×

proteomics experiment

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:45.951647

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imaging

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:45.951647

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proteins

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:45.951647

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proteomics experiment imaging proteins