gpDB

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gpDB

metasource: Fairsharing.org
version: FAIRsharing.org: gpDB; gpDB; DOI: https://doi.org/10.25504/FAIRsharing.wfrsvq; Last edited: April 26, 2021, 3:31 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

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gpDB - G-protein database

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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Other names: gpDB - G-protein database

GpDB is a publicly accessible, relational database of G-proteins and their interactions with GPCRs and effector molecules. The sequences are classified according to a hierarchy of different classes, families and sub-families, based on extensive literature search.

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Publications

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A database for G proteins and their interaction with GPCRs
PMID: 15619328

metasource: Fairsharing.org
version: FAIRsharing.org: gpDB; gpDB; DOI: https://doi.org/10.25504/FAIRsharing.wfrsvq; Last edited: April 26, 2021, 3:31 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

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gpDB: a database of GPCRs, G-proteins, effectors and their interactions
PMID: 18441001

metasource: Fairsharing.org
version: FAIRsharing.org: gpDB; gpDB; DOI: https://doi.org/10.25504/FAIRsharing.wfrsvq; Last edited: April 26, 2021, 3:31 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

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• A database for G proteins and their interaction with GPCRs PubMed citations: 14.

  14 articles citing: A database for G proteins and their interaction with GPCRs

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  Development and validation of whole genome-wide and genic microsatellite markers in oil palm (Elaeis guineensis Jacq.): First microsatellite database (OpSatdb). PMID:30760842

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  Association of G-protein β3 subunit C825T polymorphism with essential hypertension: evidence from 63 729 subjects. PMID:28540932

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  Cardiovascular diseases-related GNB3 C825T polymorphism has a significant sex-specific effect on serum soluble E-selectin levels. PMID:27990099

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  Profiling gene expression induced by protease-activated receptor 2 (PAR2) activation in human kidney cells. PMID:21072196

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  GPCRs, G-proteins, effectors and their interactions: human-gpDB, a database employing visualization tools and data integration techniques. PMID:20689020

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  Early effects of FOLFOX treatment of colorectal tumour in an animal model: assessment of changes in gene expression and FDG kinetics. PMID:19280186

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  Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. PMID:18855673

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  Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling. PMID:18671868

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  Crystal structure of squid rhodopsin with intracellularly extended cytoplasmic region. PMID:18463093

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  Prediction of GPCR-G protein coupling specificity using features of sequences and biological functions. PMID:17531799

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  Taste and pheromone perception in the fruit fly Drosophila melanogaster. PMID:17473934

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  RINGdb: an integrated database for G protein-coupled receptors and regulators of G protein signaling. PMID:17173697

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  Predicting the coupling specificity of GPCRs to G-proteins by support vector machines. PMID:16689694

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  A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models. PMID:15847681
• gpDB: a database of GPCRs, G-proteins, effectors and their interactions PubMed citations: 11.

  11 articles citing: gpDB: a database of GPCRs, G-proteins, effectors and their interactions

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  In Silico Toxicology Data Resources to Support Read-Across and (Q)SAR. PMID:31244651

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  Recent advances in computational studies of GPCR-G protein interactions. PMID:31036298

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  Predicting G protein-coupled receptor downstream signaling by tissue expression. PMID:27485444

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  Key challenges for the creation and maintenance of specialist protein resources. PMID:25820941

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  HMPAS: Human Membrane Protein Analysis System. PMID:24564858

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  PKA regulatory subunits mediate synergy among conserved G-protein-coupled receptor cascades. PMID:22186894

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  Structural determinants in the second intracellular loop of the human cannabinoid CB1 receptor mediate selective coupling to G(s) and G(i). PMID:20735408

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  GPCRs, G-proteins, effectors and their interactions: human-gpDB, a database employing visualization tools and data integration techniques. PMID:20689020

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  GPCR-OKB: the G Protein Coupled Receptor Oligomer Knowledge Base. PMID:20501551

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  The repertoire of heterotrimeric G proteins and RGS proteins in Ciona intestinalis. PMID:19806206

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  IUPHAR-DB: the IUPHAR database of G protein-coupled receptors and ion channels. PMID:18948278

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protein

metasource: Fairsharing.org
version: FAIRsharing.org: gpDB; gpDB; DOI: https://doi.org/10.25504/FAIRsharing.wfrsvq; Last edited: April 26, 2021, 3:31 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

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small molecule

metasource: Fairsharing.org
version: FAIRsharing.org: gpDB; gpDB; DOI: https://doi.org/10.25504/FAIRsharing.wfrsvq; Last edited: April 26, 2021, 3:31 p.m.; Last accessed: Jan 03 2022 7:08 p.m.

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protein sequence databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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databases of individual protein families

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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protein small molecule protein sequence protein family