Bacterial protein tYrosine Kinase database
Names
More detailed information about this field from each metasource.
Bacterial protein tYrosine Kinase database
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
BYKdb
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
bykdb
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
Names
More detailed information about this field from each metasource.
Bacterial protein tYrosine Kinase database
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
BYKdb
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
bykdb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:28.075035
Names
More detailed information about this field from each metasource.
Bacterial protein tYrosine Kinase database
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
BYKdb
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
bykdb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:28.075035
The Bacterial protein tYrosine Kinase database (BYKdb) contains computer-annotated BY-kinase sequences. The database web interface allows static and dynamic queries and provides integrated analysis tools including sequence annotation.
Description
More detailed information about this field from each metasource.
The Bacterial protein tYrosine Kinase database (BYKdb) contains computer-annotated BY-kinase sequences. The database web interface allows static and dynamic queries and provides integrated analysis tools including sequence annotation.
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Bacterial protein tYrosine Kinase database
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Bacterial protein tYrosine Kinase database (BYKdb). Bacterial tyrosine-kinases share no resemblance with their eukaryotic counterparts and they have been unified in a new protein family named BY-kinases. However, BY-kinase sequence annotations in primary databases remain incomplete. This prompted us to develop a specialized database of computer-annotated BY-kinase sequences.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:28.075035
Webpage:
http://bykdb.ibcp.frWebpage
More detailed information about this field from each metasource.
http://bykdb.ibcp.fr
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://bykdb.ibcp.fr/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
http://bykdb.ibcp.fr/BYKdb/
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:28.075035
Publications:
Publications
More detailed information about this field from each metasource.
Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes
PMID: 19189200
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Characterization of a bacterial gene encoding an autophosphorylating protein tyrosine kinase
PMID: 9434192
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature
PMID: 18772155
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
BYKdb: the Bacterial protein tYrosine Kinase database
PMID: 22080550
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
http://dx.doi.org/10.1093/nar/GKR915
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes
PMID: 19189200
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Characterization of a bacterial gene encoding an autophosphorylating protein tyrosine kinase
PMID: 9434192
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature
PMID: 18772155
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
BYKdb: the Bacterial protein tYrosine Kinase database
PMID: 22080550
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
http://dx.doi.org/10.1093/nar/GKR915
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes
PubMed citations: 22.
22 articles citing: Tyrosine-kinases in bacteria: from a matter of controversy to the status of key regulatory enzymes
Structural basis for the recognition of the bacterial tyrosine kinase Wzc by its cognate tyrosine phosphatase Wzb. PMID:35737836
An ATPase with a twist: A unique mechanism underlies the activity of the bacterial tyrosine kinase, Wzc. PMID:34550748
Comparative Phosphoproteomics of Classical Bordetellae Elucidates the Potential Role of Serine, Threonine and Tyrosine Phosphorylation in Bordetella Biology and Virulence. PMID:33928046
Wzb of Vibrio vulnificus represents a new group of low-molecular-weight protein tyrosine phosphatases with a unique insertion in the W-loop. PMID:33450227
A tyrosine phosphoregulatory system controls exopolysaccharide biosynthesis and biofilm formation in Vibrio cholerae. PMID:32841296
RocS drives chromosome segregation and nucleoid protection in Streptococcus pneumoniae. PMID:31182798
Successive Paradigm Shifts in the Bacterial Cell Cycle and Related Subjects. PMID:30866455
Comparison of two bioinformatics tools used to characterize the microbial diversity and predictive functional attributes of microbial mats from Lake Obersee, Antarctica. PMID:28655556
Characterization and 1.57 Å resolution structure of the key fire blight phosphatase AmsI from Erwinia amylovora. PMID:27917839
Tyrosine Phosphorylation and Dephosphorylation in Burkholderia cenocepacia Affect Biofilm Formation, Growth under Nutritional Deprivation, and Pathogenicity. PMID:26590274
The tyrosine kinase BceF and the phosphotyrosine phosphatase BceD of Burkholderia contaminans are required for efficient invasion and epithelial disruption of a cystic fibrosis lung epithelial cell line. PMID:25486990
Molecular complementarity between simple, universal molecules and ions limited phenotype space in the precursors of cells. PMID:25470982
Self-regulation of exopolysaccharide production in Bacillus subtilis by a tyrosine kinase. PMID:25085422
Characterization of a bacterial tyrosine kinase in Porphyromonas gingivalis involved in polymicrobial synergy. PMID:24811194
Microbial protein-tyrosine kinases. PMID:24554699
Regulatory interactions between a bacterial tyrosine kinase and its cognate phosphatase. PMID:23543749
Comparative transcriptomic analysis of the Burkholderia cepacia tyrosine kinase bceF mutant reveals a role in tolerance to stress, biofilm formation, and virulence. PMID:23435894
Bacterial tyrosine kinases: evolution, biological function and structural insights. PMID:22889913
Mucosal reactive oxygen species decrease virulence by disrupting Campylobacter jejuni phosphotyrosine signaling. PMID:22817987
Unveiling the novel dual specificity protein kinases in Bacillus anthracis: identification of the first prokaryotic dual specificity tyrosine phosphorylation-regulated kinase (DYRK)-like kinase. PMID:22711536
Listeria monocytogenes tyrosine phosphatases affect wall teichoic acid composition and phage resistance. PMID:22092439
A Myxococcus xanthus bacterial tyrosine kinase, BtkA, is required for the formation of mature spores. PMID:21840977 -
Characterization of a bacterial gene encoding an autophosphorylating protein tyrosine kinase
PubMed citations: 19.
19 articles citing: Characterization of a bacterial gene encoding an autophosphorylating protein tyrosine kinase
Wzb of Vibrio vulnificus represents a new group of low-molecular-weight protein tyrosine phosphatases with a unique insertion in the W-loop. PMID:33450227
PssP2 is a polysaccharide co-polymerase involved in exopolysaccharide chain-length determination in Rhizobium leguminosarum. PMID:25268738
Evolution of bacterial protein-tyrosine kinases and their relaxed specificity toward substrates. PMID:24728941
Microbial protein-tyrosine kinases. PMID:24554699
The role of bacterial protein tyrosine phosphatases in the regulation of the biosynthesis of secreted polysaccharides. PMID:24295407
Regulatory interactions between a bacterial tyrosine kinase and its cognate phosphatase. PMID:23543749
Bacterial tyrosine kinases: evolution, biological function and structural insights. PMID:22889913
Phosphoproteomics of Klebsiella pneumoniae NTUH-K2044 reveals a tight link between tyrosine phosphorylation and virulence. PMID:19696081
Structural basis for the regulation mechanism of the tyrosine kinase CapB from Staphylococcus aureus. PMID:18547145
Positive correlation between tyrosine phosphorylation of CpsD and capsular polysaccharide production in Streptococcus pneumoniae. PMID:14526017
Transmembrane modulator-dependent bacterial tyrosine kinase activates UDP-glucose dehydrogenases. PMID:12970183
Involvement of a protein tyrosine kinase in production of the polymeric bioemulsifier emulsan from the oil-degrading strain Acinetobacter lwoffii RAG-1. PMID:12533476
Impact of phosphorylation of specific residues in the tyrosine autokinase, Wzc, on its activity in assembly of group 1 capsules in Escherichia coli. PMID:12426330
Changes in availability of oxygen accentuate differences in capsular polysaccharide expression by phenotypic variants and clinical isolates of Streptococcus pneumoniae. PMID:11500414
The molecular weight distribution of succinoglycan produced by Sinorhizobium meliloti is influenced by specific tyrosine phosphorylation and ATPase activity of the cytoplasmic domain of the ExoP protein. PMID:11489870
X-ray structure of HPr kinase: a bacterial protein kinase with a P-loop nucleotide-binding domain. PMID:11483495
A novel bacterial tyrosine kinase essential for cell division and differentiation. PMID:10557274
Protein tyrosine kinases in bacterial pathogens are associated with virulence and production of exopolysaccharide. PMID:10369665
Cells of Escherichia coli contain a protein-tyrosine kinase, Wzc, and a phosphotyrosine-protein phosphatase, Wzb. PMID:10348860 -
Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature
PubMed citations: 19.
19 articles citing: Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature
Structural basis for the recognition of the bacterial tyrosine kinase Wzc by its cognate tyrosine phosphatase Wzb. PMID:35737836
The Study of Microbe-Host Two-Way Communication. PMID:35208862
Clostridioides difficile Phosphoproteomics Shows an Expansion of Phosphorylated Proteins in Stationary Growth Phase. PMID:34986318
The Tyrosine-Autokinase UbK Is Required for Proper Cell Growth and Cell Morphology of Streptococcus pneumoniae. PMID:31551943
Synthesis of Rhizobial Exopolysaccharides and Their Importance for Symbiosis with Legume Plants. PMID:29194398
Substrate Specificity of the Bacillus subtilis BY-Kinase PtkA Is Controlled by Alternative Activators: TkmA and SalA. PMID:27725816
Evolution of bacterial protein-tyrosine kinases and their relaxed specificity toward substrates. PMID:24728941
Microbial protein-tyrosine kinases. PMID:24554699
Comparative analysis of the Tyr-kinases CapB1 and CapB2 fused to their cognate modulators CapA1 and CapA2 from Staphylococcus aureus. PMID:24146800
The Escherichia coli phosphotyrosine proteome relates to core pathways and virulence. PMID:23785281
Regulatory interactions between a bacterial tyrosine kinase and its cognate phosphatase. PMID:23543749
Bacterial tyrosine kinases: evolution, biological function and structural insights. PMID:22889913
Unveiling the novel dual specificity protein kinases in Bacillus anthracis: identification of the first prokaryotic dual specificity tyrosine phosphorylation-regulated kinase (DYRK)-like kinase. PMID:22711536
Bacterial phosphoproteomic analysis reveals the correlation between protein phosphorylation and bacterial pathogenicity. PMID:22196355
BYKdb: the Bacterial protein tYrosine Kinase database. PMID:22080550
An essential tyrosine phosphatase homolog regulates cell separation, outer membrane integrity, and morphology in Caulobacter crescentus. PMID:21705597
A framework for classification of prokaryotic protein kinases. PMID:20520783
Crystal structures of Wzb of Escherichia coli and CpsB of Streptococcus pneumoniae, representatives of two families of tyrosine phosphatases that regulate capsule assembly. PMID:19616007
Pivotal roles of the outer membrane polysaccharide export and polysaccharide copolymerase protein families in export of extracellular polysaccharides in gram-negative bacteria. PMID:19258536 -
BYKdb: the Bacterial protein tYrosine Kinase database
PubMed citations: 16.
16 articles citing: BYKdb: the Bacterial protein tYrosine Kinase database
Novel Tyrosine Kinase-Mediated Phosphorylation With Dual Specificity Plays a Key Role in the Modulation of Streptococcus pyogenes Physiology and Virulence. PMID:34950110
An ATPase with a twist: A unique mechanism underlies the activity of the bacterial tyrosine kinase, Wzc. PMID:34550748
The molecular basis of regulation of bacterial capsule assembly by Wzc. PMID:34272394
Comparative Phosphoproteomics of Classical Bordetellae Elucidates the Potential Role of Serine, Threonine and Tyrosine Phosphorylation in Bordetella Biology and Virulence. PMID:33928046
The Tyrosine-Autokinase UbK Is Required for Proper Cell Growth and Cell Morphology of Streptococcus pneumoniae. PMID:31551943
SCMBYK: prediction and characterization of bacterial tyrosine-kinases based on propensity scores of dipeptides. PMID:28155663
Protein-tyrosine phosphorylation interaction network in Bacillus subtilis reveals new substrates, kinase activators and kinase cross-talk. PMID:25374563
PssP2 is a polysaccharide co-polymerase involved in exopolysaccharide chain-length determination in Rhizobium leguminosarum. PMID:25268738
Self-regulation of exopolysaccharide production in Bacillus subtilis by a tyrosine kinase. PMID:25085422
Mycobacterium tuberculosis supports protein tyrosine phosphorylation. PMID:24927537
Evolution of bacterial protein-tyrosine kinases and their relaxed specificity toward substrates. PMID:24728941
Microbial protein-tyrosine kinases. PMID:24554699
Interaction of bacterial fatty-acid-displaced regulators with DNA is interrupted by tyrosine phosphorylation in the helix-turn-helix domain. PMID:23939619
Regulatory interactions between a bacterial tyrosine kinase and its cognate phosphatase. PMID:23543749
Phosphotyrosine recognition domains: the typical, the atypical and the versatile. PMID:23134684
Bacterial tyrosine kinases: evolution, biological function and structural insights. PMID:22889913 - http://dx.doi.org/10.1093/nar/GKR915
Tags:
Tags
More detailed information about this field from each metasource.
molecular function
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
molecular structure
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
protein structure
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
polypeptide_region
metasource: Fairsharing.org
version: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
protein sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
databases of individual protein families
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
gene and protein families
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
proteins
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
sequence analysis
metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:28.075035
Tags
More detailed information about this field from each metasource.
molecular function
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
molecular structure
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
protein structure
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
polypeptide_region
metasource: Fairsharing.orgversion: FAIRsharing.org: BYKdb; Bacterial protein tYrosine Kinase database; DOI: https://doi.org/10.25504/FAIRsharing.jr30xc; Last edited: Feb. 12, 2019, 1:42 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
protein sequence databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
databases of individual protein families
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
gene and protein families
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:28.075035
proteins
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:28.075035
sequence analysis
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:34:28.075035
molecular function molecular structure protein structure polypeptide region protein sequence protein family gene and protein families proteins sequence analysis
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