VARAdb

Description

More detailed information about this field from each metasource.

Variants and regulatory information

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

ATACdb

Human Assay-for-Transposase-Accessible Chromatin data

KnockTF

Transcription factors (TFs) and their target genes have important functions in human diseases and biological processes. Gene expression profile analysis before and after knockdown or knockout is one o ...

The Arabidopsis Gene Regulatory Information Server

The Arabidopsis Gene Regulatory Information Server (AGRIS) is a new information resource of Arabidopsis promoter sequences, transcription factors and their target genes. AGRIS currently contains two d ...

ENdb: a manually curated database of experimentally supported enhancers for human and mouse

Enhancers are a class of cis-regulatory elements that can increase gene transcription by forming loops in intergenic regions, introns and exons. Enhancers, as well as their associated target genes, an ...

Interferome

This database enables the reliable identification of an individual Interferon Regulated Gene (IRG) or IRG signatures from high-throughput data sets (i.e. microarray, proteomic data etc.). It also assi ...

CloneDB

Clones and libraries: sequence data, map positions and distributor information

The conserved clinical variation visualization tool

The availability of genetic variants, together with phenotypic annotations from model organisms, facilitates comparing these variants with equivalent variants in humans. However, existing databases an ...

CATA

CATA (The chromatin accessibility of cancer database) is a comprehensive Cancer ATAC-seq database that aim to provided a large number of available resources on cancer ATAC-seq datas. The database was ...

PICEAdatabase

PICEAdatabase is a web database for Picea omics and phenotypic information.

MetaBase - The wiki-database of biological databases

MetaBase is the community-curated collection of all biological databases for use by the research community as a source of reliable information.

HbVar

Human haemoglobin variants and thalassemias

Pompe

Novel disease-associated variants, common sequence variants, and results from newborn screening. The Pompe disease GAA variant database represents an effort to collect all known variants in the GAA g ...

net alignment annotation Format

The net file format is used to describe the axtNet data that underlie the net alignment annotations in the Genome Browser.

lncRNAdb

Long Non-Coding RNA Database

BC SNPmax

Database platform for managing molecular data (sequence variants and DNA array) with associated phenotypes and analyzing the data for QTL mapping.

Personal Genome SNP Format

This format is for displaying SNPs from personal genomes. It is the same as is used for the Genome Variants and Population Variants tracks.

RNA Markup Language

RNAML syntax was designed to facilitate the interoperation of multiple RNA informatics programs and to exchange basic RNA molecular information.

PAZAR

PAZAR is a software framework for the construction and maintenance of regulatory sequence data annotations; a framework which allows multiple boutique databases to function independently within a larg ...

European Data Format

The European Data Format (EDF) is a simple and flexible format for exchange and storage of multichannel biological and physical signals. More information http://www.edfplus.info

Helminth.net

Parasitic nematode sequencing project

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Webpage:

Publications:

Publications
More detailed information about this field from each metasource.

https://doi.org/10.1093/nar/gkaa922
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

More to explore:

1/20

ATACdb

KnockTF

The Arabidopsis Gene Regulatory Information Server

ENdb: a manually curated database of experimentally supported enhancers for human and mouse

Interferome

CloneDB

The conserved clinical variation visualization tool

CATA

PICEAdatabase

MetaBase - The wiki-database of biological databases

HbVar

Pompe

net alignment annotation Format

lncRNAdb

BC SNPmax

Personal Genome SNP Format

RNA Markup Language

PAZAR

European Data Format

Helminth.net

VARAdb

Webpage:

Publications: Publications More detailed information about this field from each metasource. × https://doi.org/10.1093/nar/gkaa922 metasource: Nucleic Acid Research database catalogue version: extracted_at: 2022-11-04T11:16:25.468657 Close

More to explore:

1/20

ATACdb

KnockTF

The Arabidopsis Gene Regulatory Information Server

ENdb: a manually curated database of experimentally supported enhancers for human and mouse

Interferome

CloneDB

The conserved clinical variation visualization tool

CATA

PICEAdatabase

MetaBase - The wiki-database of biological databases

HbVar

Pompe

net alignment annotation Format

lncRNAdb

BC SNPmax

Personal Genome SNP Format

RNA Markup Language

PAZAR

European Data Format

Helminth.net

Publications:

Publications
More detailed information about this field from each metasource.

https://doi.org/10.1093/nar/gkaa922
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657