TrSDB

TFBSbank

Transcription factor binding profiles deduced from ChIP-seq or ChIP-chip data

PRODORIC2

BloodChIP

Transcription factor binding profiles in human haematopoietic stem/progenitor cells

Factorbook

Human transcription factor binding data from ChIP-seq

YeTFaSCo

Yeast Transcription Factor binding Site sequence Collection

SNP2TFBS

Regulatory SNPs affecting predicted transcription factor binding sites

MachiBase

Drosophila melanogaster 5' mRNA transcription start site database

OnTheFly

DNA-binding specificities of transcription factors in Drosophila

DPRP

A database of phenotype-specific regulatory programs derived from transcription factor binding data

TTSMI

Triplex Target DNA Sites in the human genome

Saccharomyces cerevisiae Transcription Factor Database

ScerTF is a database of position weight matrices (PWMs) for transcription factors in Saccharomyces species. It identifies a single matrix for each TF that best predicts in vivo data, providing metrics ...

CMGSDB

Computational models for gene silencing in C. elegans

RegPrecise

Predicted regulons in prokaryotic genomes

Greglist

G-quadruplex motifs and potentially G-quadruplex regulated genes

TRED - Transcriptional Regulatory Element Database

Transcriptional regulatory element database

PlantProm

Plant promoter sequences

Animal Transcription Factor Database

AnimalTFDB is a comprehensive animal transcription factor database. The resource is classification of transcription factors from 50 genomes from species including Homo sapiens and Caenorhabditis elega ...

CTCF Binding Site Database

Experimentally identified and predicted CTCF binding sties

Gene Transcription Regulation Database

Gene Transcription Regulation Database (GTRD) is a database of transcription factor binding sites (TFBSs) identified by ChIP-seq experiments for human and mouse.