The Vertebrate Genome Annotation Database
Names
More detailed information about this field from each metasource.
The Vertebrate Genome Annotation Database
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
VEGA
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Vega
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Vertebrate Genome Annotation database
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
The Vertebrate Genome Annotation Database
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
VEGA
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Vega
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Vertebrate Genome Annotation database
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Other names: VEGA, Vega, Vertebrate Genome Annotation database
Names
More detailed information about this field from each metasource.
The Vertebrate Genome Annotation Database
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
VEGA
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Vega
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Vertebrate Genome Annotation database
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
The Vertebrate Genome Annotation (VEGA) database is a central repository for high quality manual annotation of vertebrate finished genome sequence.
Description
More detailed information about this field from each metasource.
The Vertebrate Genome Annotation (VEGA) database is a central repository for high quality manual annotation of vertebrate finished genome sequence.
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
The Vertebrate Genome Annotation (VEGA) database is a central repository for high quality, frequently updated, manual annotation of vertebrate finished genome sequence. Details of the projects for each species are available through the homepages for human, mouse, and zebrafish. The website is built upon code from the EnsEMBL (http://www.ensembl.org) project.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
A repository for high-quality gene models produced by the manual annotation of vertebrate genomes. The final update of Vega, version 68, was released in February 2017 and is now archived at vega.archive.ensembl.org. We plan to maintain this resource until Feb 2020.
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Webpage:
http://vega.sanger.ac.uk/Webpage
More detailed information about this field from each metasource.
http://vega.sanger.ac.uk/
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
http://vega.archive.ensembl.org/index.html
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Licence:
Name: Ensembl Privacy StatementLicence name
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Ensembl Privacy Statement
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Copyrights
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
http://www.ensembl.org/info/about/legal/privacy.html
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://vega.archive.ensembl.org/index.html
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
The vertebrate genome annotation (Vega) database
PMID: 18003653
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
The Vertebrate Genome Annotation browser 10 years on
PMID: 24316575
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://dx.doi.org/10.1093/nar/gkt1241
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
The vertebrate genome annotation (Vega) database
PMID: 18003653
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
The Vertebrate Genome Annotation browser 10 years on
PMID: 24316575
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
http://dx.doi.org/10.1093/nar/gkt1241
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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The vertebrate genome annotation (Vega) database
PubMed citations: 141.
141 articles citing: The vertebrate genome annotation (Vega) database
ViMIC: a database of human disease-related virus mutations, integration sites and cis-effects. PMID:34500462
Where are G-quadruplexes located in the human transcriptome? PMID:33575590
Comprehensive Profiling of Gene Expression in the Cerebral Cortex and Striatum of BTBRTF/ArtRbrc Mice Compared to C57BL/6J Mice. PMID:33362469
Transcriptomics in Toxicogenomics, Part II: Preprocessing and Differential Expression Analysis for High Quality Data. PMID:32397130
A systematic evaluation of single cell RNA-seq analysis pipelines. PMID:31604912
Beyond sequencing: re-visiting annotations for PJL as a test case. PMID:31366397
Genetic, Inflammatory, and Epithelial Cell Differentiation Factors Control Expression of Human Calpain-14. PMID:30626591
Two novel colorectal cancer risk loci in the region on chromosome 9q22.32. PMID:29541405
TERIUS: accurate prediction of lncRNA via high-throughput sequencing data representing RNA-binding protein association. PMID:29504902
Inferring the evolution of the major histocompatibility complex of wild pigs and peccaries using hybridisation DNA capture-based sequencing. PMID:29256177
scRNASeqDB: A Database for RNA-Seq Based Gene Expression Profiles in Human Single Cells. PMID:29206167
A Computational Methodology to Overcome the Challenges Associated With the Search for Specific Enzyme Targets to Develop Drugs Against Leishmania major. PMID:28638238
De novo RNA sequence assembly during in vivo inflammatory stress reveals hundreds of unannotated lincRNAs in human blood CD14+ monocytes and in adipose tissue. PMID:28389524
Genomic structure of the horse major histocompatibility complex class II region resolved using PacBio long-read sequencing technology. PMID:28361880
Identification of long non-coding transcripts with feature selection: a comparative study. PMID:28335739
A fuzzy method for RNA-Seq differential expression analysis in presence of multireads. PMID:28185579
The state of play in higher eukaryote gene annotation. PMID:27773922
The Effect of Human Genome Annotation Complexity on RNA-Seq Gene Expression Quantification. PMID:27532059
Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling. PMID:27232982
Topology based identification and comprehensive classification of four-transmembrane helix containing proteins (4TMs) in the human genome. PMID:27030248
Genome-Wide Identification and Characterization of Long Non-Coding RNAs from Mulberry (Morus notabilis) RNA-seq Data. PMID:26938562
In Silico Functional Annotation of Genomic Variation. PMID:26724722
Ensembl 2016. PMID:26687719
DANIO-CODE: Toward an Encyclopedia of DNA Elements in Zebrafish. PMID:26671609
Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond. PMID:26615025
Comprehensive comparative homeobox gene annotation in human and mouse. PMID:26412852
Orthology for comparative genomics in the mouse genome database. PMID:26223881
Mouse Genome Database: From sequence to phenotypes and disease models. PMID:26150326
Informatics resources for the Collaborative Cross and related mouse populations. PMID:26135136
A unified gene catalog for the laboratory mouse reference genome. PMID:26084703
BCR repertoire sequencing: different patterns of B-cell activation after two Meningococcal vaccines. PMID:25976772
A comprehensive evaluation of ensembl, RefSeq, and UCSC annotations in the context of RNA-seq read mapping and gene quantification. PMID:25765860
Immunoglobulins: 25 years of immunoinformatics and IMGT-ONTOLOGY. PMID:25521638
Identification of antigen-specific B cell receptor sequences using public repertoire analysis. PMID:25392534
Discovery Genetics - The History and Future of Spontaneous Mutation Research. PMID:25364627
Renal Gene Expression Database (RGED): a relational database of gene expression profiles in kidney disease. PMID:25252782
Hypoxia adaptations in the grey wolf (Canis lupus chanco) from Qinghai-Tibet Plateau. PMID:25078401
GeneSense: a new approach for human gene annotation integrated with protein-protein interaction networks. PMID:24667292
Immunoglobulin and T Cell Receptor Genes: IMGT(®) and the Birth and Rise of Immunoinformatics. PMID:24600447
Assessing the impact of human genome annotation choice on RNA-seq expression estimates. PMID:24564364
Ensembl 2014. PMID:24316576
The Vertebrate Genome Annotation browser 10 years on. PMID:24316575
ExoLocator--an online view into genetic makeup of vertebrate proteins. PMID:24271393
Alzheimer's disease: analyzing the missing heritability. PMID:24244562
Current status and new features of the Consensus Coding Sequence database. PMID:24217909
Functional transcriptomics in the post-ENCODE era. PMID:24172201
The mouse Gene Expression Database (GXD): 2014 update. PMID:24163257
The tiger genome and comparative analysis with lion and snow leopard genomes. PMID:24045858
The relationship between gene isoform multiplicity, number of exons and protein divergence. PMID:24023641
Comprehensive characterization of 10,571 mouse large intergenic noncoding RNAs from whole transcriptome sequencing. PMID:23951020
Fine mapping of type 1 diabetes regions Idd9.1 and Idd9.2 reveals genetic complexity. PMID:23934554
Detecting and comparing non-coding RNAs in the high-throughput era. PMID:23887659
Gene fusion analysis in the battle against the African endemic sleeping sickness. PMID:23874788
Transcriptome analyses of the human retina identify unprecedented transcript diversity and 3.5 Mb of novel transcribed sequence via significant alternative splicing and novel genes. PMID:23865674
Exome sequencing resolves apparent incidental findings and reveals further complexity of SH3TC2 variant alleles causing Charcot-Marie-Tooth neuropathy. PMID:23806086
An automated algorithm for extracting functional immunologic V-genes from genomes in jawed vertebrates. PMID:23793106
The non-obese diabetic mouse sequence, annotation and variation resource: an aid for investigating type 1 diabetes. PMID:23729657
Sequencing and comparative analysis of the gorilla MHC genomic sequence. PMID:23589541
iSeeRNA: identification of long intergenic non-coding RNA transcripts from transcriptome sequencing data. PMID:23445546
The genomic signature of trait-associated variants. PMID:23418889
The disruption of Celf6, a gene identified by translational profiling of serotonergic neurons, results in autism-related behaviors. PMID:23407934
Finding protein-coding genes through human polymorphisms. PMID:23349826
Identification of TP53 as an acute lymphocytic leukemia susceptibility gene through exome sequencing. PMID:23255406
Gene family matters: expanding the HGNC resource. PMID:23245209
Long-range transcriptome sequencing reveals cancer cell growth regulatory chimeric mRNA. PMID:23226102
Ensembl 2013. PMID:23203987
GenomeRNAi: a database for cell-based and in vivo RNAi phenotypes, 2013 update. PMID:23193271
PeroxiBase: a database for large-scale evolutionary analysis of peroxidases. PMID:23180785
Genenames.org: the HGNC resources in 2013. PMID:23161694
Prediction of altered 3'- UTR miRNA-binding sites from RNA-Seq data: the swine leukocyte antigen complex (SLA) as a model region. PMID:23139801
The IMGT/HLA database. PMID:23080122
AbsIDconvert: an absolute approach for converting genetic identifiers at different granularities. PMID:22967011
GENCODE: the reference human genome annotation for The ENCODE Project. PMID:22955987
Combining RT-PCR-seq and RNA-seq to catalog all genic elements encoded in the human genome. PMID:22955982
29 mammalian genomes reveal novel exaptations of mobile elements for likely regulatory functions in the human genome. PMID:22952639
The GENCODE pseudogene resource. PMID:22951037
MiR-25 regulates Wwp2 and Fbxw7 and promotes reprogramming of mouse fibroblast cells to iPSCs. PMID:22912667
Incorporating RNA-seq data into the zebrafish Ensembl genebuild. PMID:22798491
The yak genome and adaptation to life at high altitude. PMID:22751099
The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner. PMID:22709888
IMGT-ONTOLOGY 2012. PMID:22654892
O-miner: an integrative platform for automated analysis and mining of -omics data. PMID:22600742
SNPnexus: a web server for functional annotation of novel and publicly known genetic variants (2012 update). PMID:22544707
The importance of identifying alternative splicing in vertebrate genome annotation. PMID:22434846
Community gene annotation in practice. PMID:22434843
Tracking and coordinating an international curation effort for the CCDS Project. PMID:22434842
Evidence for transcript networks composed of chimeric RNAs in human cells. PMID:22238572
Isolation of homozygous mutant mouse embryonic stem cells using a dual selection system. PMID:22127858
Ensembl 2012. PMID:22086963
The UCSC Genome Browser. PMID:21975940
RNAcentral: A vision for an international database of RNA sequences. PMID:21940779
Consequences of the discontinuation of the International Protein Index (IPI) database and its substitution by the UniProtKB "complete proteome" sets. PMID:21932440
BioMart Central Portal: an open database network for the biological community. PMID:21930507
Targeted enrichment beyond the consensus coding DNA sequence exome reveals exons with higher variant densities. PMID:21787409
Ensembl BioMarts: a hub for data retrieval across taxonomic space. PMID:21785142
Published and perished? The influence of the searched protein database on the long-term storage of proteomics data. PMID:21700957
Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling. PMID:21685096
A conditional knockout resource for the genome-wide study of mouse gene function. PMID:21677750
Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition. PMID:21555364
The origins, evolution, and functional potential of alternative splicing in vertebrates. PMID:21551269
Saturation of the human phenome. PMID:21532833
MAISTAS: a tool for automatic structural evaluation of alternative splicing products. PMID:21498402
Shotgun proteomics aids discovery of novel protein-coding genes, alternative splicing, and "resurrected" pseudogenes in the mouse genome. PMID:21460061
UniProt Knowledgebase: a hub of integrated protein data. PMID:21447597
Disease and phenotype data at Ensembl. PMID:21400687
Transcript catalogs of human chromosome 21 and orthologous chimpanzee and mouse regions. PMID:21400203
The GENCODE exome: sequencing the complete human exome. PMID:21364695
Naming 'junk': human non-protein coding RNA (ncRNA) gene nomenclature. PMID:21296742
The Genomic HyperBrowser: inferential genomics at the sequence level. PMID:21182759
The mouse Gene Expression Database (GXD): 2011 update. PMID:21062809
The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics. PMID:21051359
ZFIN: enhancements and updates to the Zebrafish Model Organism Database. PMID:21036866
PathEx: a novel multi factors based datasets selector web tool. PMID:20969778
Genome-wide data-mining of candidate human splice translational efficiency polymorphisms (STEPs) and an online database. PMID:20948966
The IKMC web portal: a central point of entry to data and resources from the International Knockout Mouse Consortium. PMID:20929875
genenames.org: the HGNC resources in 2011. PMID:20929869
Exploring zebrafish genomic, functional and phenotypic data using ZFIN. PMID:20836073
Quantifying the mechanisms of domain gain in animal proteins. PMID:20633280
Integrating heterogeneous sequence information for transcriptome-wide microarray design; a Zebrafish example. PMID:20626891
Reconstruction and validation of RefRec: a global model for the yeast molecular interaction network. PMID:20498836
AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome. PMID:20482635
Consistent annotation of gene expression arrays. PMID:20459806
From IMGT-ONTOLOGY to IMGT/LIGMotif: the IMGT standardized approach for immunoglobulin and T cell receptor gene identification and description in large genomic sequences. PMID:20433708
Discovery of candidate disease genes in ENU-induced mouse mutants by large-scale sequencing, including a splice-site mutation in nucleoredoxin. PMID:20011118
DASMiner: discovering and integrating data from DAS sources. PMID:19919683
Ensembl's 10th year. PMID:19906699
A unique, consistent identifier for alternatively spliced transcript variants. PMID:19865484
EMAGE mouse embryo spatial gene expression database: 2010 update. PMID:19767607
The completion of the Mammalian Gene Collection (MGC). PMID:19767417
The cadherin superfamily and epileptogenesis: end of the beginning? PMID:19471581
Sim4cc: a cross-species spliced alignment program. PMID:19429899
Cross-species mapping of bidirectional promoters enables prediction of unannotated 5' UTRs and identification of species-specific transcripts. PMID:19393065
Identifying protein-coding genes in genomic sequences. PMID:19226436
Annotation of mammalian primary microRNAs. PMID:19038026
Ensembl 2009. PMID:19033362
Genome and proteome annotation: organization, interpretation and integration. PMID:19019817
INTERFEROME: the database of interferon regulated genes. PMID:18996892
G2Cdb: the Genes to Cognition database. PMID:18984621
IMGT, the international ImMunoGeneTics information system. PMID:18978023
PEDANT covers all complete RefSeq genomes. PMID:18940859
Splice-mediated Variants of Proteins (SpliVaP) - data and characterization of changes in signatures among protein isoforms due to alternative splicing. PMID:18831736 -
The Vertebrate Genome Annotation browser 10 years on
PubMed citations: 26.
26 articles citing: The Vertebrate Genome Annotation browser 10 years on
MIKB: A manually curated and comprehensive knowledge base for myocardial infarction. PMID:34900127
All Creatures Great and Small: New Approaches for Understanding Down Syndrome Genetics. PMID:33097276
A systematic evaluation of bioinformatics tools for identification of long noncoding RNAs. PMID:33055239
Exploring the functional impact of alternative splicing on human protein isoforms using available annotation sources. PMID:29931155
SRARP and HSPB7 are epigenetically regulated gene pairs that function as tumor suppressors and predict clinical outcome in malignancies. PMID:29577611
Consensus coding sequence (CCDS) database: a standardized set of human and mouse protein-coding regions supported by expert curation. PMID:29126148
Mouse Genome Informatics (MGI) Resource: Genetic, Genomic, and Biological Knowledgebase for the Laboratory Mouse. PMID:28838066
Age-associated DNA methylation changes in naive CD4+ T cells suggest an evolving autoimmune epigenotype in aging T cells. PMID:28322571
Ensembl 2017. PMID:27899575
ANOS1: a unified nomenclature for Kallmann syndrome 1 gene (KAL1) and anosmin-1. PMID:27899353
Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences. PMID:27881428
Genenames.org: the HGNC and VGNC resources in 2017. PMID:27799471
Flexible Data Analysis Pipeline for High-Confidence Proteogenomics. PMID:27786492
Tiered Human Integrated Sequence Search Databases for Shotgun Proteomics. PMID:27577934
Mouse models of Down syndrome: gene content and consequences. PMID:27538963
Filtering genetic variants and placing informative priors based on putative biological function. PMID:26866982
The European Bioinformatics Institute in 2016: Data growth and integration. PMID:26673705
Death of a dogma: eukaryotic mRNAs can code for more than one protein. PMID:26578573
Comprehensive comparative homeobox gene annotation in human and mouse. PMID:26412852
Devising a Consensus Framework for Validation of Novel Human Coding Loci. PMID:26367542
Creating reference gene annotation for the mouse C57BL6/J genome assembly. PMID:26187010
Comparison of GENCODE and RefSeq gene annotation and the impact of reference geneset on variant effect prediction. PMID:26110515
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data. PMID:26109357
The BioMart community portal: an innovative alternative to large, centralized data repositories. PMID:25897122
IMGT®, the international ImMunoGeneTics information system® 25 years on. PMID:25378316
Genenames.org: the HGNC resources in 2015. PMID:25361968 - http://dx.doi.org/10.1093/nar/gkt1241
Tags:
Tags
More detailed information about this field from each metasource.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
genome
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
region
metasource: Fairsharing.org
version: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
human and other vertebrate genomes
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
model organisms, comparative genomics
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
chromosome
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
dog
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
genomic sequences
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
gorilla
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
human
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
mouse
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
pig
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
wallaby
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
zebrafish
metasource: re3data.org
version: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
region
metasource: Fairsharing.orgversion: FAIRsharing.org: VEGA; The Vertebrate Genome Annotation Database; DOI: https://doi.org/10.25504/FAIRsharing.mr293q; Last edited: April 26, 2021, 2:59 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
human and other vertebrate genomes
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
model organisms, comparative genomics
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
chromosome
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
dog
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
genomic sequences
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
gorilla
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
human
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
mouse
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
pig
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
wallaby
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
zebrafish
metasource: re3data.orgversion: re3data.org: Vega; editing status 2021-09-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3W77X last accessed: 2022-11-04
gene genome region human and other vertebrate genomes model organisms chromosome dog genomic sequences gorilla human mouse pig wallaby zebrafish
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