SuperSite

ProTeus

Signature sequences at the protein N- and C-termini

PDBSite

3D structure of protein functional sites

Minimotif Miner

Search tools for short functional motifs involved in posttranslational modifications, binding to other proteins, nucleic acids, or small molecules

mutLBSgeneDB

Mutations in Ligand Binding Sites gene DataBase

LigAsite

Better characterization of binding sites in proteins and the ability to accurately predict their location and energetic properties are major challenges which, if addressed, would have many valuable pr ...

eF-site - Electrostatic surface of Functional site

Electrostatic potentials and hydrophobic properties of the active sites

PHOSIDA

Phosphorylation sites in various species identified by mass spectrometry

MeMotif

Linear motifs in alpha-helical transmembrane proteins

SitEx

Projections of protein functional Sites on Exons

SuperPain

MALISAM

Manual alignments for structurally analogous motifs in proteins

JAIL

Structure-based interface library for macromolecules

SynSysNet

A database on the structural synaptome

Voronoia

A database for the computation of atomic packing density values of protein structures

FireDB

fireDB is a database of Protein Data Bank structures, ligands and annotated functional site residues. The database can be accessed by PDB codes or UniProt accession numbers as well as keywords.

PRIDB

Protein-RNA Interface Database

SuperToxic

A comprehensive database of toxic compounds

PolyQ

Polyglutamine Repeats in Proteins

IBIS

Inferred Biomolecular Interaction Server: protein-protein, ligand- and nucleic acid-binding sites