Minimotif Miner

Search tools for short functional motifs involved in posttranslational modifications, binding to other proteins, nucleic acids, or small molecules

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More detailed information about this field from each metasource.

Search tools for short functional motifs involved in posttranslational modifications, binding to other proteins, nucleic acids, or small molecules

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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More detailed information about this field from each metasource.

protein sequence databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

protein sequence motifs and active sites

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Minimotif Miner 3.0

A database of short functional motifs involved in posttranslational modifications, binding to other proteins, nucleic acids, or small molecules.

SuperSite

Dictionary of binding sites in proteins

CoPS

Comprehensive peptide signature database

ProTeus

Signature sequences at the protein N- and C-termini

PDBSite

3D structure of protein functional sites

MeMotif

Linear motifs in alpha-helical transmembrane proteins

mutLBSgeneDB

Mutations in Ligand Binding Sites gene DataBase

eF-site - Electrostatic surface of Functional site

Electrostatic potentials and hydrophobic properties of the active sites

PHOSIDA

Phosphorylation sites in various species identified by mass spectrometry

SitEx

Projections of protein functional Sites on Exons

PRIDB

Protein-RNA Interface Database

MimoDB

Mimotope database, active site-mimicking peptides selected from phage-display libraries

NBDB

NBDB database provides profiles of Elementary Functional Loops (EFLs) involved in binding of nucleotide-containing ligands. Each EFL in form of a PSSM (position-specific scoring matrix) profile is com ...

O-GLYCBASE

O-GLYCBASE is a database of glycoproteins with O-linked and C-linked glycosylation sites. Entries with at least one experimentally verified glycosylation site have been compiled from protein sequence ...

PolyQ

Polyglutamine Repeats in Proteins

Nucleic Acids Database

The Nucleic Acids Database contains information about experimentally-determined nucleic acids and complex assemblies. NDB can be used to perform searches based on annotations relating to sequence, str ...

PhosphoSite Plus

PhosphoSite Plus provides extensive information on mammalian post-translational modifications (PTMs). The resource supersedes PhosphoSite a mammalian protein database that provides information about i ...

FireDB

fireDB is a database of Protein Data Bank structures, ligands and annotated functional site residues. The database can be accessed by PDB codes or UniProt accession numbers as well as keywords.

Integrated resource of protein families, domains and functional sites

InterPro is a resource that provides functional analysis of protein sequences by classifying them into families and predicting the presence of domains and important sites. To classify proteins in this ...

ASC - Active Sequence Collection

ASC (Active Sequences Collection) is a database of short amino acid sequences with known biological activity. The current version is substantially improved as compared to the previous release; it now ...

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Minimotif Miner 3.0

SuperSite

CoPS

ProTeus

PDBSite

MeMotif

mutLBSgeneDB

eF-site - Electrostatic surface of Functional site

PHOSIDA

SitEx

PRIDB

MimoDB

NBDB

O-GLYCBASE

PolyQ

Nucleic Acids Database

PhosphoSite Plus

FireDB

Integrated resource of protein families, domains and functional sites

ASC - Active Sequence Collection