SEAweb

the small RNA Expression Atlas web application. Sign in with Google or with you SEA account below. If you have not created an account yet, then please register first. If you have received an eMail from Oasis 2 that the classification or DE analysis results are downloadable, you can provide the given link here, in order to upload the output to this system and compare them with publically available datasets. SEA (also SEAweb) is a searchable database for the expression of small RNA (miRNA, piRNA, snoRNA, snRNA, siRNA) and pathogens. Publically available sRNA sequencing datasets were analysed with Oasis 2 pipelines and the results are stored here for easy and comparable search. Our curated, ontology connected metadata enables powerful searches within this database. Learn more in the documentation and publication

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SEAweb: the small RNA Expression Atlas web application
PMID: 31598718

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:33.487962

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• SEAweb: the small RNA Expression Atlas web application PubMed citations: 9.

  9 articles citing: SEAweb: the small RNA Expression Atlas web application

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  A Novel Tissue Atlas and Online Tool for the Interrogation of Small RNA Expression in Human Tissues and Biofluids. PMID:35317387

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  piRNAs and PIWI Proteins as Diagnostic and Prognostic Markers of Genitourinary Cancers. PMID:35204687

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  Bioinformatic Tools for the Analysis and Prediction of ncRNA Interactions. PMID:34768830

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  miRNATissueAtlas2: an update to the human miRNA tissue atlas. PMID:34570238

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  DIANA-miTED: a microRNA tissue expression database. PMID:34469540

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  Single-cell biology to decode the immune cellular composition of kidney inflammation. PMID:34125286

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  Roles of host small RNAs in the evolution and host tropism of coronaviruses. PMID:33587745

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  Two MicroRNAs Are Sufficient for Embryonic Patterning in C. elegans. PMID:33125867

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  Explainable Deep Learning for Augmentation of Small RNA Expression Profiles. PMID:31855058

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functional, regulatory and non-coding rna

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:33.487962

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gene transcripts

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:33.487962

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rna-seq

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:33.487962

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biomarkers

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:33.487962

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ontology and terminology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:33.487962

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functional, regulatory and non-coding rna gene transcripts rna sequence biomarkers ontology and terminology