Patrocles

Names
More detailed information about this field from each metasource.

Patrocles
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

patrocles
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

Other names: patrocles

Polymorphic miRNA-mediated gene regulation in vertebrates

Webpage:

http://www.patrocles.org

Publications:

Publications
More detailed information about this field from each metasource.

Patrocles: a database of polymorphic miRNA-mediated gene regulation in vertebrates
PMID: 19906729
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

http://nar.oxfordjournals.org/content/38/suppl_1/D640
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Patrocles: a database of polymorphic miRNA-mediated gene regulation in vertebrates PubMed citations: 77.

77 articles citing: Patrocles: a database of polymorphic miRNA-mediated gene regulation in vertebrates

Role of SNPs in the Biogenesis of Mature miRNAs. PMID:34239922
SNPs within microRNA binding sites and the prognosis of breast cancer. PMID:33658398
Polymorphisms in MicroRNA Target Sites of TGF-β Signaling Pathway Genes and Susceptibility to Allergic Rhinitis. PMID:33596578
Critical Analysis of Genome-Wide Association Studies: Triple Negative Breast Cancer Quae Exempli Causa. PMID:32823908
Towards precision medicine: interrogating the human genome to identify drug pathways associated with potentially functional, population-differentiated polymorphisms. PMID:31578463
The Impact of Population Variation in the Analysis of microRNA Target Sites. PMID:31234531
regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors. PMID:30557297
miRNA Mediated Noise Making of 3'UTR Mutations in Cancer. PMID:30424545
Architecture of polymorphisms in the human genome reveals functionally important and positively selected variants in immune response and drug transporter genes. PMID:30219098
MicroRNA-Related Genetic Variants Associated with Survival of Head and Neck Squamous Cell Carcinoma. PMID:29880533
MSDD: a manually curated database of experimentally supported associations among miRNAs, SNPs and human diseases. PMID:29106642
A GDF15 3' UTR variant, rs1054564, results in allele-specific translational repression of GDF15 by hsa-miR-1233-3p. PMID:28806401
Genome-scale identification of microRNA-related SNPs associated with risk of head and neck squamous cell carcinoma. PMID:28582492
An Integrating Approach for Genome-Wide Screening of MicroRNA Polymorphisms Mediated Drug Response Alterations. PMID:28480217
Functional variomics and network perturbation: connecting genotype to phenotype in cancer. PMID:28344341
The Role of microRNAs in the Repeated Parallel Diversification of Lineages of Midas Cichlid Fish from Nicaragua. PMID:27189980
Predictive role of microRNA-related genetic polymorphisms in the pathological complete response to neoadjuvant chemoradiotherapy in locally advanced rectal cancer patients. PMID:26934318
Bioinformatic tools for microRNA dissection. PMID:26578605
Altered Gene Expression Associated with microRNA Binding Site Polymorphisms. PMID:26496489
Micro-RNA Binding Site Polymorphisms in the WFS1 Gene Are Risk Factors of Diabetes Mellitus. PMID:26426397
Allelic variation in CRHR1 predisposes to panic disorder: evidence for biased fear processing. PMID:26324098
Principles of miRNA-mRNA interactions: beyond sequence complementarity. PMID:26037721
Epigenetic regulation of the ELOVL6 gene is associated with a major QTL effect on fatty acid composition in pigs. PMID:25887840
SubmiRine: assessing variants in microRNA targets using clinical genomic data sets. PMID:25813044
Genetic variants in miRNA processing genes and pre-miRNAs are associated with the risk of chronic lymphocytic leukemia. PMID:25793711
Genome-wide identification of microRNA expression quantitative trait loci. PMID:25791433
MicroRNA biogenesis and cellular proliferation. PMID:25724890
Genetic variability of microRNA regulome in human. PMID:25629077
Identification of a functional SNP in the 3'UTR of CXCR2 that is associated with reduced risk of lung cancer. PMID:25480945
Converging evidence implicates the abnormal microRNA system in schizophrenia. PMID:25429046
MicroRNA related polymorphisms and breast cancer risk. PMID:25390939
CardioGxE, a catalog of gene-environment interactions for cardiometabolic traits. PMID:25368670
MicroRNA polymorphisms and risk of colorectal cancer. PMID:25342389
Integrative post-genome-wide association analysis of CDKN2A and TP53 SNPs and risk of esophageal adenocarcinoma. PMID:25280564
Computational Methods for MicroRNA Target Prediction. PMID:25153283
Identifying a polymorphic 'switch' that influences miRNAs' regulation of a myasthenia gravis risk pathway. PMID:25118158
miR-485-5p binding site SNP rs8752 in HPGD gene is associated with breast cancer risk. PMID:25003827
Synthesis of 53 tissue and cell line expression QTL datasets reveals master eQTLs. PMID:24973796
Single Nucleotide Polymorphisms Associated with MicroRNA Regulation. PMID:24970168
MicroRNAs related polymorphisms and genetic susceptibility to esophageal squamous cell carcinoma. PMID:24916311
Polymorphisms in microRNA target sites modulate risk of lymphoblastic and myeloid leukemias and affect microRNA binding. PMID:24886876
Mining the 3'UTR of autism-implicated genes for SNPs perturbing microRNA regulation. PMID:24747189
Inferring the evolutionary history of primate microRNA binding sites: overcoming motif counting biases. PMID:24723422
Macros in microRNA target identification: a comparative analysis of in silico, in vitro, and in vivo approaches to microRNA target identification. PMID:24717361
mrSNP: software to detect SNP effects on microRNA binding. PMID:24629096
Pharmacogenetics of microRNAs and microRNAs biogenesis machinery in pediatric acute lymphoblastic leukemia. PMID:24614921
Extensive sequence variation in the 3' untranslated region of the KRAS gene in lung and ovarian cancer cases. PMID:24552817
Influence of genetic polymorphisms involved in the hypothalamic-pituitary-adrenal axis and their interactions with environmental factors on antidepressant response. PMID:24422887
SPOCK3, a risk gene for adult ADHD and personality disorders. PMID:24292267
rSNPBase: a database for curated regulatory SNPs. PMID:24285297
A genetic polymorphism in pre-miR-27a confers clinical outcome of non-small cell lung cancer in a Chinese population. PMID:24223174
Genome-wide and species-wide in silico screening for intragenic MicroRNAs in human, mouse and chicken. PMID:23762306
Emerging roles for miRNAs in the development, diagnosis, and treatment of diabetic nephropathy. PMID:23666892
Candidate gene association studies: a comprehensive guide to useful in silico tools. PMID:23656885
Prioritization of genetic variants in the microRNA regulome as functional candidates in genome-wide association studies. PMID:23595788
The impact of 3'UTR variants on differential expression of candidate cancer susceptibility genes. PMID:23472213
Pivotal role of the muscle-contraction pathway in cryptorchidism and evidence for genomic connections with cardiomyopathy pathways in RASopathies. PMID:23410028
MirSNP, a database of polymorphisms altering miRNA target sites, identifies miRNA-related SNPs in GWAS SNPs and eQTLs. PMID:23173617
Prediction of altered 3'- UTR miRNA-binding sites from RNA-Seq data: the swine leukocyte antigen complex (SLA) as a model region. PMID:23139801
Association study identifying polymorphisms in CD47 and other extracellular matrix pathway genes as putative prognostic markers for colorectal cancer. PMID:23011546
Genetic architecture of microRNA expression: implications for the transcriptome and complex traits. PMID:22658545
Cross talk between microRNA and coding cancer genes. PMID:22647358
Identification of polymorphisms in genes of the immune system in cynomolgus macaques. PMID:22527486
A cross-species analysis of microRNAs in the developing avian face. PMID:22523571
Possible genetic predisposition to lymphedema after breast cancer. PMID:22404826
Catalog of microRNA seed polymorphisms in vertebrates. PMID:22303453
3'-UTR and functional secretor haplotypes in mannose-binding lectin 2 are associated with increased colon cancer risk in African Americans. PMID:22282660
miRdSNP: a database of disease-associated SNPs and microRNA target sites on 3'UTRs of human genes. PMID:22276777
miRNEST database: an integrative approach in microRNA search and annotation. PMID:22135287
A miRNA-492 binding-site polymorphism in BSG (basigin) confers risk to psoriasis in central south Chinese population. PMID:21655935
Single-nucleotide polymorphisms among microRNA: big effects on cancer. PMID:21627860
Novel variants in the PRDX6 Gene and the risk of Acute Lung Injury following major trauma. PMID:21627785
Evolution of microRNAs and the diversification of species. PMID:21169229
Cardiovascular Disease, Single Nucleotide Polymorphisms; and the Renin Angiotensin System: Is There a MicroRNA Connection? PMID:20948563
MicroSNiPer: a web tool for prediction of SNP effects on putative microRNA targets. PMID:20809528
Demonstrating polymorphic miRNA-mediated gene regulation in vivo: application to the g+6223G->A mutation of Texel sheep. PMID:20679369
Fine mapping of chromosome 15q25.1 lung cancer susceptibility in African-Americans. PMID:20587604
http://nar.oxfordjournals.org/content/38/suppl_1/D640

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Tags
More detailed information about this field from each metasource.

human genes and diseases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

general polymorphism databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

genetic variation
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

dna polymorphism
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

functional, regulatory and non-coding rna
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

gene regulation
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

model organisms
metasource: bio.tools
version: extracted_at: 2022-11-04T11:35:58.540987

human genes and diseases polymorphism genetic variation dna polymorphism functional, regulatory and non-coding rna gene regulation model organisms

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