PCIR
A database of Plant Chloroplast Inverted Repeats. Plant Chloroplast Inverted Repeats. Welcome to PCIR! Plant Chloroplast Inverted Repeats (PCIR) is an interactive, web-based platform containing various sequenced chloroplast genomes that enables detection, searching, and visualization of large-scale detailed information on IRs. PCIR contains many datasets, including 21,433 IRs, 113 plants chloroplast genomes, 16,948 functional genes and 21,659 visual maps. This database offers an online prediction tool for detecting IRs based on Chloroplast DNA sequences. PCIR can also analyze phylogenetic relationships using IR information among different species and provide users with high-quality marker maps. This database will be a valuable resource for IR distribution patterns, related genes and architectural features
Description
More detailed information about this field from each metasource.
A database of Plant Chloroplast Inverted Repeats. Plant Chloroplast Inverted Repeats. Welcome to PCIR! Plant Chloroplast Inverted Repeats (PCIR) is an interactive, web-based platform containing various sequenced chloroplast genomes that enables detection, searching, and visualization of large-scale detailed information on IRs. PCIR contains many datasets, including 21,433 IRs, 113 plants chloroplast genomes, 16,948 functional genes and 21,659 visual maps. This database offers an online prediction tool for detecting IRs based on Chloroplast DNA sequences. PCIR can also analyze phylogenetic relationships using IR information among different species and provide users with high-quality marker maps. This database will be a valuable resource for IR distribution patterns, related genes and architectural features
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:13.519009
Webpage:
http://biodb.sdau.edu.cn/pcir/index.phpWebpage
More detailed information about this field from each metasource.
http://biodb.sdau.edu.cn/pcir/index.php
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:13.519009
Publications:
Publications
More detailed information about this field from each metasource.
PCIR: a database of Plant Chloroplast Inverted Repeats
PMID: 31696928
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:13.519009
Publications
More detailed information about this field from each metasource.
PCIR: a database of Plant Chloroplast Inverted Repeats
PMID: 31696928
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:13.519009
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PCIR: a database of Plant Chloroplast Inverted Repeats
PubMed citations: 3.
3 articles citing: PCIR: a database of Plant Chloroplast Inverted Repeats
Finding and Characterizing Repeats in Plant Genomes. PMID:35037215
Gene Loss and Evolution of the Plastome. PMID:32992972
CpGDB : A Comprehensive Database of Chloroplast Genomes. PMID:32405169
Tags:
Tags
More detailed information about this field from each metasource.
plant biology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:13.519009
phylogenetics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:13.519009
agricultural science
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:13.519009
mapping
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:13.519009
biomarkers
metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:13.519009
Tags
More detailed information about this field from each metasource.
plant biology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:13.519009
phylogenetics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:13.519009
agricultural science
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:13.519009
mapping
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:13.519009
biomarkers
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:29:13.519009
plant biology phylogenetics agricultural science mapping biomarkers
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