Nucleotide Sequence Database Collaboration

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Nucleotide Sequence Database Collaboration

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:09.050950

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insdc

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:09.050950

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Other names: insdc

This database consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. It is a long-standing foundational initiative that operates between DDBJ, EMBL-EBI and NCBI. It covers the spectrum of data raw reads, though alignments and assemblies to functional annotation, enriched with contextual information relating to samples and experimental configurations.

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Publications

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Nucleotide sequence database policies
PMID: 12436968

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:09.050950

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• Nucleotide sequence database policies PubMed citations: 27.

  27 articles citing: Nucleotide sequence database policies

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  DNA Data Bank of Japan (DDBJ) update report 2021. PMID:34751405

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  The international nucleotide sequence database collaboration. PMID:33166387

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  DDBJ update: streamlining submission and access of human data. PMID:33156332

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  Data-Driven Materials Science: Status, Challenges, and Perspectives. PMID:31728276

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  DDBJ Database updates and computational infrastructure enhancement. PMID:31724722

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  BioSamples database: an updated sample metadata hub. PMID:30407529

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  DDBJ update: the Genomic Expression Archive (GEA) for functional genomics data. PMID:30357349

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  DNA Data Bank of Japan: 30th anniversary. PMID:29040613

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  Controlling new knowledge: Genomic science, governance and the politics of bioinformatics. PMID:28056721

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  DNA Data Bank of Japan. PMID:27924010

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  DNA data bank of Japan (DDBJ) progress report. PMID:26578571

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  RNASeqMetaDB: a database and web server for navigating metadata of publicly available mouse RNA-Seq datasets. PMID:26323714

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  It's more than stamp collecting: how genome sequencing can unify biological research. PMID:26003218

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  The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data. PMID:25477381

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  Extensive error in the number of genes inferred from draft genome assemblies. PMID:25474019

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  Structural and functional diversity of free-living microorganisms in reef surface, Kra island, Thailand. PMID:25037613

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  Microbial ecology of Thailand tsunami and non-tsunami affected terrestrials. PMID:24710002

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  Metagenomic profiles of free-living archaea, bacteria and small eukaryotes in coastal areas of Sichang island, Thailand. PMID:23282134

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  Organizing research data. PMID:21999359

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  Modernizing reference genome assemblies. PMID:21750661

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  The International Nucleotide Sequence Database Collaboration. PMID:21106499

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  Ongoing and future developments at the Universal Protein Resource. PMID:21051339

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  Public databases and software for the pathway analysis of cancer genomes. PMID:19455256

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  The universal protein resource (UniProt). PMID:18045787

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  Mouse Phenotype Database Integration Consortium: integration [corrected] of mouse phenome data resources. PMID:17436037

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  EMBL Nucleotide Sequence Database: developments in 2005. PMID:16381823

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  Specialized microbial databases for inductive exploration of microbial genome sequences. PMID:15698474

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nucleic acids

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:09.050950

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sequence analysis

metasource: bio.tools
version: extracted_at: 2022-11-04T11:32:09.050950

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nucleic acids sequence analysis