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Microarray and Gene Expression Data Ontology

Names
More detailed information about this field from each metasource.

Microarray and Gene Expression Data Ontology
metasource: Biontology / Bioportal
version: 1.3.1.1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/MO

MO
metasource: Biontology / Bioportal
version: 1.3.1.1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/MO

Other names: MO

Names

More detailed information about this field from each metasource.

Microarray and Gene Expression Data Ontology

metasource: Biontology / Bioportal
version: 1.3.1.1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/MO

MO

metasource: Biontology / Bioportal
version: 1.3.1.1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/MO

Concepts, definitions, terms, and resources for standardized description of a microarray experiment in support of MAGE v.1.

Description

More detailed information about this field from each metasource.

Concepts, definitions, terms, and resources for standardized description of a microarray experiment in support of MAGE v.1.

metasource: Biontology / Bioportal
version: 1.3.1.1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/MO

Webpage:

http://mged.sourceforge.net/ontologies/MGEDontology.php

Webpage

More detailed information about this field from each metasource.

http://mged.sourceforge.net/ontologies/MGEDontology.php

metasource: Biontology / Bioportal
version: 1.3.1.1 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/MO

More to explore:

1/20

MicroArray Gene Expression Tabular Format

Sharing of microarray data within the research community has been greatly facilitated by the development of the disclosure and communication standards MIAME and MAGE-ML by the FGED Society. However, t ...

Minimum Information About a Microarray Experiment

MIAME is intended to specify all the information necessary for an unambiguous interpretation of a microarray experiment, and potentially to reproduce it. MIAME defines the content but not the format f ...

Princeton University MicroArray database

The Princeton University MicroArray database (PUMAdb) stores raw and normalized data from microarray experiments, as well as their corresponding image files. In addition, PUMAdb provides interfaces fo ...

Cancer Research and Management ACGT Master Ontology

The intention of the ACGT Master Ontology (MO) is to represent the domain of cancer research and management, with special emphasis on mammary carcinoma (“breast cancer”), Wilms’ tumor (nephroblastoma) ...

Gene Expression Barcode

Gene expression data sorted into two groups: expressed and not expressed genes

Expression Atlas

The Expression Atlas is a free resource providing information on gene expression patterns under different biological conditions in a variety of species. Gene expression data is re-analysed in-house to ...

Gene Expression Omnibus

The Gene Expression Omnibus (GEO) is a public repository that archives and freely distributes microarray, next-generation sequencing, and other forms of high-throughput functional genomic data submitt ...

Neurodegenerative Disease Data Ontology

Neurodegenerative Disease Data Ontology (NDDO) is an ontology for describing data on neurodegenerative disease patients.

MGI Mouse Gene Expression Database

The Gene Expression Database (GXD) is a community resource for gene expression information from the laboratory mouse. GXD stores and integrates different types of expression data and makes these data ...

CleanEx

CleanEx is a database which provides access to public gene expression data via unique approved gene symbols and which represents heterogeneous expression data produced by different technologies in a w ...

Genomic Expression Archive

Genomic Expression Archive (GEA) is a public database of functional genomics data such as gene expression, epigenetics and genotyping SNP array. Both microarray- and sequence-based data are accepted i ...

Sensitive Data Ontology

The SENSO ontology is designed to provide classification terms for labeling sensitive data for data archival and sharing.

A Systematic Annotation Package

ASAP is a relational database and web interface developed to store, update and distribute genome sequence data and gene expression data. It was designed to facilitate ongoing community annotation of g ...

PROkariotIC Database Of Gene-Regulation

PRODORIC is a comprehensive database about gene regulation and gene expression in prokaryotes. It includes a manually curated and unique collection of transcription factor binding sites.

miRGator

microRNA target prediction, functional analysis, and gene expression data

ArrayExpress

ArrayExpress is a database of functional genomics experiments that can be queried and the data downloaded. It includes gene expression data from microarray and high throughput sequencing studies. Data ...

Minimum Information About a Microarray Experiment involving Plants

MIAME/Plant is a standard describing which biological details should be captured for describing microarray experiments involving plants. Detailed information is required about biological aspects such ...

NimbleGen Gene Description

The NimbleGen Gene Description is a text tabular format that contains descriptive information (annotation) about the genes on an array. Please note that Roche issued a statement in 2012 as follows: "A ...

Gene Expression Ontology

An application ontology for the domain of gene expression. The ontology integrates fragments of GO and MI with data from GOA, IntAct, UniProt, NCBI, and orthology relations using ontological propertie ...

PEATmoss

A unified gene expression atlas for the model plant Physcomitrella patens. PEATmoss is an interactive tool to visualize gene expression data. These help pages explain several ways to query the expres ...

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Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine