TISCH

Description

More detailed information about this field from each metasource.

Uniformly processed tumor (and microenvironment) scRNA-seq data

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

lnc2cancer

Lnc2Cancer 3.0 includes comprehensive data on experimentally supported long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) associated with human cancers. In addition, web tools for analyzing l ...

eQTL Catalogue

The eQTL Catalogue aims to provide uniformly processed gene expression and splicing QTLs from all available public studies on human. Quantitative trait loci (QTL) are genomic variants that are signifi ...

FusionCancer

FusionCancer - a database of cancer fusion genes derived from RNA-Seq data

scAPAdb

scAPAdb provides a comprehensive and manually curated atlas of poly(A) sites, APA events and poly(A) signals at the single-cell level in six species based on a large volume of scRNA-seq data. Currentl ...

GeneMarkeR

A Database and User Interface for scRNA-seq Marker Genes.

ChIPBase

ChIPBase v2.0 is an open database for studying the transcription factor binding sites and motifs, and decoding the transcriptional regulatory networks of lncRNAs, miRNAs, other ncRNAs and protein-codi ...

Mouse Tumor Biology Database

The Mouse Tumor Biology (MTB) Database supports the use of the mouse as a model system of hereditary cancer by providing electronic access to: Information on endogenous spontaneous and induced tumors ...

expVIP

Customizable RNA-seq Data Analysis and Visualization Platform.

CistromeDB

ChIP-Seq and DNase-Seq data in human and mouse

Mouse Tumor Database

The Mouse Tumor Biology (MTB) Database supports the use of the mouse as a model system of human cancers by providing access to information on and data for: spontaneous and induced tumors in mice, gene ...

ColorCells

ColorCells is a database of expression, classification and functions of lncRNAs in single cells. Single cell RNA sequencing (scRNA-Seq) technology has revealed significant differences in gene expressi ...

circbase

Thousands of circular RNAs (circRNAs) have recently been shown to be expressed in eukaryotic cells [Salzman et al. 2012, Jeck et al. 2013, Memczak et al. 2013, Salzman et al. 2013]. Here you can explo ...

CAUSALdb

A database for disease/trait causal variants identified using summary statistics of genome-wide association studies. A GWAS fine-mapping pipeline used in CAUSALdb. CAUSALdb integrates large numbers ...

FinaleDB

FinaleDB (FragmentatIoN AnaLysis of cEll-free DNA DataBase) is a comprehensive cell-free DNA (cfDNA) fragmentation pattern database to host uniformly processed and quality controlled paired-end cfDNA ...

Patient-Derived tumor Xenograft Finder

PDX Finder is an open repository for the upload and storage of clinical, genomic and functional Patient-Derived Xenograph (PDX) data which provides a comprehensive global catalogue of PDX models avail ...

ctcRbase

ctcRbase is agene expression database of circulating tumor cells and microemboli Circulating tumor cells/microemboli (CTCs/CTM) are those cells that depart from cancerous lesions and shed into the blo ...

Sinbase

Integrated database to study genomics, genetics and comparative genomics in Sesamum indicum.

Complete Genomics

Complete Genomics provides free public access to a variety of whole human genome data sets generated from Complete Genomics’ sequencing service. The research community can explore and familiarize them ...

CoralTBase

Transcriptomic database for 14 species of scleractinian corals.

StarBASE

microRNA-mRNA interaction maps

Previous Next

Webpage:

Publications:

Publications
More detailed information about this field from each metasource.

https://doi.org/10.1093/nar/gkaa1020
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

More to explore:

1/20

lnc2cancer

eQTL Catalogue

FusionCancer

scAPAdb

GeneMarkeR

ChIPBase

Mouse Tumor Biology Database

expVIP

CistromeDB

Mouse Tumor Database

ColorCells

circbase

CAUSALdb

FinaleDB

Patient-Derived tumor Xenograft Finder

ctcRbase

Sinbase

Complete Genomics

CoralTBase

StarBASE

TISCH

Webpage:

Publications: Publications More detailed information about this field from each metasource. × https://doi.org/10.1093/nar/gkaa1020 metasource: Nucleic Acid Research database catalogue version: extracted_at: 2022-11-04T11:16:25.468657 Close

More to explore:

1/20

lnc2cancer

eQTL Catalogue

FusionCancer

scAPAdb

GeneMarkeR

ChIPBase

Mouse Tumor Biology Database

expVIP

CistromeDB

Mouse Tumor Database

ColorCells

circbase

CAUSALdb

FinaleDB

Patient-Derived tumor Xenograft Finder

ctcRbase

Sinbase

Complete Genomics

CoralTBase

StarBASE

Publications:

Publications
More detailed information about this field from each metasource.

https://doi.org/10.1093/nar/gkaa1020
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657