Other names: ggdb
A Grameneae Genome Alignment Database of Homologous Genes Hierarchically Related to Evolutionary Events.
plant biology phylogenetics genetics mapping sequence assembly
HOVERGEN is a database of homologous vertebrate genes that allows one to select sets of homologous genes among vertebrate species, and to visualize multiple alignments and phylogenetic trees.
Database of homologous genes from Ensembl organisms and Ensembl families, structured under ACNUC sequence database management system.
HOGENOM is a phylogenomic database providing families of homologous genes and associated phylogenetic trees (and sequence alignments) for a wide set sequenced organisms.
HOMSTRAD (HOMologous STRucture Alignment Database) is a curated database of structure-based alignments for homologous protein families. All known protein structure are clustered into homologous famili ...
An integrated multi-omics database of barley gene families.
Integrated database of genome annotation, genomic diversity, and CAPS marker information for mandarin molecular breeding.
KAIKObase is a silkworm genome database.
CarrotOmics is an integrated web-based relational database, developed to house and integrate genomic, genetic and breeding data for carrot and related species. CarrotOmics includes genome assemblies, ...
The SilkDB is an open-access database for genome biology of the silkworm (Bombyx mori). SilkDB contains the genomic data, including genome assembly, gene annotation, chromosomal mapping, orthologous r ...
BAliBASE; a benchmark alignment database, including enhancements for repeats, transmembrane sequences and circular permutations.
PhyloXML is an XML language designed to describe phylogenetic trees (or networks) and associated data. PhyloXML provides elements for commonly used features, such as taxonomic information, gene names ...
Phylogenetic Exploration of Viruses and their Evolutionary Relationships
PmiREN is a comprehensive encyclopedia of plant miRNAs.
A comprehensive genome platform for Brassicaceae plants.
A database of Plant Chloroplast Inverted Repeats. Plant Chloroplast Inverted Repeats. Welcome to PCIR! Plant Chloroplast Inverted Repeats (PCIR) is an interactive, web-based platform containing vari ...
A gene Expression Browser for RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics.
This ensembl website features the zebrafish whole genome shotgun assembly sequence.
The Sequence Alignment/Map (SAM) format is a TAB-delimited text format consisting of a header section, which is optional, and an alignment section.
The Ontology of Vaccine Adverse Events (OVAE) is a biomedical ontology in the area of vaccine adverse events. While they are extremely useful in decreasing infection prevalence in human populations, v ...
Tunicates are lower chordates that include among others the two ascidians Ciona intestinalis and Ciona savignyi. This subphylum is particularly interesting because it shares many developmental and phy ...