Functional Coverage of the Proteome
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Functional Coverage of the Proteome
metasource: Fairsharing.org
version: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
FCP
metasource: Fairsharing.org
version: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
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Functional Coverage of the Proteome
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
FCP
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
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Functional Coverage of the Proteome
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
FCP
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
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FCP is a publicly accessible web tool dedicated to analysing the current state and trends on the population of available structures along the classification schemes of enzymes and nuclear receptors, offering both graphical and quantitative data on the degree of functional coverage in that portion of the proteome by existing structures, as well as on the bias observed in the distribution of those structures among proteins.
Description
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FCP is a publicly accessible web tool dedicated to analysing the current state and trends on the population of available structures along the classification schemes of enzymes and nuclear receptors, offering both graphical and quantitative data on the degree of functional coverage in that portion of the proteome by existing structures, as well as on the bias observed in the distribution of those structures among proteins.
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Tools and resources for translating the remarkable growth witnessed in recent years in the number of protein structures determined experimentally into actual gain in the functional coverage of the proteome are becoming increasingly necessary. We introduce FCP, a publicly accessible web tool dedicated to analyzing the current state and trends of the population of structures within protein families. FCP offers both graphical and quantitative data on the degree of functional coverage of enzymes and nuclear receptors by existing structures, as well as on the bias observed in the distribution of structures along their respective functional classification schemes.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Webpage:
http://cgl.imim.es/fcp/Webpage
More detailed information about this field from each metasource.
http://cgl.imim.es/fcp/
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications:
Publications
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FCP: functional coverage of the proteome by structures
PMID: 16705012
metasource: Fairsharing.org
version: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/14/1792
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
FCP: functional coverage of the proteome by structures
PMID: 16705012
metasource: Fairsharing.org
version: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/14/1792
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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FCP: functional coverage of the proteome by structures
PubMed citations: 4.
4 articles citing: FCP: functional coverage of the proteome by structures
Coverage of protein domain families with structural protein-protein interactions: current progress and future trends. PMID:24931138
A canonical cation-π interaction stabilizes the agonist conformation of estrogen-like nuclear receptors. PMID:20364341
iPHACE: integrative navigation in pharmacological space. PMID:20156991
In silico pharmacology for drug discovery: methods for virtual ligand screening and profiling. PMID:17549047 - http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/14/1792
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annotation
metasource: Fairsharing.org
version: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
region
metasource: Fairsharing.org
version: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
protein sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
databases of individual protein families
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metabolic and signaling pathways
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
enzymes and enzyme nomenclature
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Tags
More detailed information about this field from each metasource.
annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
region
metasource: Fairsharing.orgversion: FAIRsharing.org: FCP; Functional Coverage of the Proteome; DOI: https://doi.org/10.25504/FAIRsharing.77d397; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
protein sequence databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
databases of individual protein families
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metabolic and signaling pathways
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
enzymes and enzyme nomenclature
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
protein region protein sequence protein family metabolic and signaling pathways enzymes and enzyme nomenclature
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